Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0003100g0080 Nicotiana tabacum HOM05D006869 ORTHO05D008641 4.3e-99 364.8 198 100.0
Sopen06g021250 Solanum pennellii HOM05D006869 ORTHO05D008641 2.4e-41 172.9 159 69.2
PGSC0003DMG400026597 Solanum tuberosum HOM05D006869 ORTHO05D008641 3.1e-41 172.6 148 72.3
Nitab4.5_0004658g0060 Nicotiana tabacum HOM05D006869 ORTHO05D008641 1.6e-32 143.7 150 63.3
MSTRG.17527 Avicennia marina HOM05D006869 ORTHO05D008641 1.3e-31 140.6 141 59.6
Atru.chr6.1763 Acer truncatum HOM05D006869 ORTHO05D008641 1.7e-31 140.2 149 61.1
CSS0028384 Camellia sinensis var. sinensis HOM05D006869 ORTHO05D008641 3.8e-31 139.0 135 60.7
CSS0030709 Camellia sinensis var. sinensis HOM05D006869 ORTHO05D008641 3.8e-31 139.0 135 60.7
ClCG09G012310 Citrullus lanatus HOM05D006869 ORTHO05D008641 1.1e-30 137.5 156 54.5
Migut.D00490 Erythranthe guttata HOM05D006869 ORTHO05D008641 2.1e-29 133.3 138 57.2
FAN04G2266 Fragaria x ananassa HOM05D006869 ORTHO05D008641 2.1e-29 133.3 148 54.1
TWI15G0987 Tripterygium wilfordii HOM05D006869 ORTHO05D008641 3.6e-29 132.5 156 55.8
DCAR_005606 Daucus carota HOM05D006869 ORTHO05D008641 6.1e-29 131.7 144 61.1
FAN18G0870 Fragaria x ananassa HOM05D006869 ORTHO05D008641 6.1e-29 131.7 148 53.4
Phvul.005G061500 Phaseolus vulgaris HOM05D006869 ORTHO05D008641 8.0e-29 131.3 141 55.3
CiPaw.12G061200 Carya illinoinensis HOM05D006869 ORTHO05D008641 2.3e-28 129.8 143 55.2
Lj3g0015338 Lotus japonicus HOM05D006869 ORTHO05D008641 3.0e-28 129.4 143 53.8
Potri.001G145500 Populus trichocarpa HOM05D006869 ORTHO05D008641 3.0e-28 129.4 161 51.6
Actinidia09229 Actinidia chinensis HOM05D002067 ORTHO05D002244 5.2e-28 128.6 148 55.4
FAN08G2623 Fragaria x ananassa HOM05D006869 ORTHO05D008641 5.2e-28 128.6 148 54.1
PGR042G2539 Punica granatum HOM05D006869 ORTHO05D008641 6.7e-28 128.3 148 52.0
TPR.G26622 Trifolium pratense HOM05D006869 ORTHO05D008641 6.7e-28 128.3 142 54.2
FAN13G1368 Fragaria x ananassa HOM05D006869 ORTHO05D008641 8.8e-28 127.9 149 53.7
VMungo1080G1596 Vigna mungo HOM05D006869 ORTHO05D008641 8.8e-28 127.9 151 53.0
Ca_03396_v3 Cicer arietinum L. HOM05D006869 ORTHO05D008641 1.5e-27 127.1 148 53.4
Ciclev10033051m.g Citrus clementina HOM05D006869 ORTHO05D008641 1.5e-27 127.1 167 51.5
Sabra01G0114100 Salix brachista HOM05D006869 ORTHO05D008641 1.5e-27 127.1 150 54.7
Medtr2g071640 Medicago truncatula HOM05D006869 ORTHO05D008641 2.6e-27 126.3 157 51.0
FvH4_5g21430 Fragaria vesca HOM05D006869 ORTHO05D008641 5.7e-27 125.2 148 51.4
Duzib205G1446 Durio zibethinus HOM05D006869 ORTHO05D008641 7.5e-27 124.8 137 53.3
Manes.15G174500 Manihot esculenta HOM05D006869 ORTHO05D008641 9.7e-27 124.4 166 51.2
Gorai.006G215800 Gossypium raimondii HOM05D006869 ORTHO05D008641 1.3e-26 124.0 188 46.3
RcHm_v2.0_Chr7g0208861 Rosa chinensis HOM05D006869 ORTHO05D008641 1.3e-26 124.0 148 52.7
Hma1.2p1_0414F.1_g147870 Hydrangea macrophylla HOM05D006869 ORTHO05D008641 1.7e-26 123.6 136 55.9
Glyma.13G259900 Glycine max HOM05D006869 ORTHO05D008641 2.2e-26 123.2 134 56.0
CsaV3_1G016990 Cucumis sativus L. HOM05D006869 ORTHO05D008641 2.8e-26 122.9 147 49.7
CsaV3_3G049460 Cucumis sativus L. HOM05D006869 ORTHO05D008641 2.8e-26 122.9 147 49.7
MELO3C003378.2 Cucumis melo HOM05D006869 ORTHO05D008641 4.8e-26 122.1 156 48.1
Gohir.D09G192900 Gossypium hirsutum HOM05D006869 ORTHO05D008641 6.3e-26 121.7 168 47.6
COL.COLO4_17099 Corchorus olitorius HOM05D006869 ORTHO05D008641 8.2e-26 121.3 169 48.5
ECA233G4479 Erigeron canadensis HOM05D006869 ORTHO05D008641 8.2e-26 121.3 154 50.0
MD06G1029000 Malus domestica HOM05D006869 ORTHO05D008641 8.2e-26 121.3 145 53.1
Thecc.03G232900 Theobroma cacao HOM05D006869 ORTHO05D008641 8.2e-26 121.3 168 48.8
TAR375G0341 Trochodendron aralioides HOM05D006869 ORTHO05D008641 8.2e-26 121.3 147 53.1
Gohir.A09G198300 Gossypium hirsutum HOM05D006869 ORTHO05D008641 1.4e-25 120.6 168 47.0
Prupe.5G042800 Prunus persica HOM05D006869 ORTHO05D008641 1.4e-25 120.6 162 46.9
Hund14421 Selenicereus undatus HOM05D006869 ORTHO05D008641 1.4e-25 120.6 143 55.2
Peaxi162Scf00497g00098 Petunia axillaris HOM05D006869 ORTHO05D008641 1.8e-25 120.2 80 80.0
PSO732G0001 Papaver somniferum HOM05D006869 ORTHO05D008641 5.3e-25 118.6 148 52.0
PSO675G8621 Papaver somniferum HOM05D006869 ORTHO05D008641 7.0e-25 118.2 159 50.9
PSO832G0919 Papaver somniferum HOM05D006869 ORTHO05D008641 9.1e-25 117.9 159 50.3
CiPaw.11G089700 Carya illinoinensis HOM05D006869 ORTHO05D008641 1.2e-24 117.5 148 51.4
Aqoxy3G02480 Aquilegia oxysepala HOM05D006869 ORTHO05D008641 1.6e-24 117.1 165 49.1
Sc22g0001440 Simmondsia chinensis HOM05D006869 ORTHO05D008641 3.5e-24 115.9 129 56.6
CANSAT21G0218 Cannabis sativa HOM05D006869 ORTHO05D008641 5.9e-24 115.2 145 48.3
Eucgr.E00305 Eucalyptus grandis HOM05D006869 ORTHO05D008641 7.7e-24 114.8 129 54.3
Cpa.g.sc6.427 Carica papaya HOM05D006869 ORTHO05D008641 1.0e-23 114.4 141 51.1
arahy.Tifrunner.gnm1.ann1.TLF144 Arachis hypogaea HOM05D006869 ORTHO05D008641 1.3e-23 114.0 149 45.6
Lalb_Chr25g0285441 Lupinus albus HOM05D006869 ORTHO05D008641 1.7e-23 113.6 130 50.8
GSVIVG01013242001 Vitis vinifera HOM05D006869 ORTHO05D008641 3.8e-23 112.5 134 52.2
SGA_v2.0_scaffold94G28479 Striga asiatica HOM05D006869 ORTHO05D008641 5.0e-23 112.1 122 57.4
arahy.Tifrunner.gnm1.ann1.4F5UFQ Arachis hypogaea HOM05D006869 ORTHO05D008641 6.5e-23 111.7 149 45.0
Nn1g00590 Nelumbo nucifera HOM05D006869 ORTHO05D008641 6.5e-23 111.7 149 47.7
arahy.Tifrunner.gnm1.ann1.U4TMK5 Arachis hypogaea HOM05D006869 ORTHO05D008641 1.5e-22 110.5 141 46.1
HanXRQChr08g0227941 Helianthus annuus HOM05D006869 ORTHO05D008641 1.5e-22 110.5 150 46.7
Cc08_g02310 Coffea canephora HOM05D006869 ORTHO05D008641 2.5e-22 109.8 84 65.5
Actinidia14827 Actinidia chinensis HOM05D006869 ORTHO05D008641 3.2e-22 109.4 162 49.4
DCAR_024975 Daucus carota HOM05D006869 ORTHO05D008641 5.5e-22 108.6 138 50.0
Glyma.15G248100 Glycine max HOM05D006869 ORTHO05D008641 5.5e-22 108.6 147 52.4
unitig_746.g26748 Utricularia gibba HOM05D006869 ORTHO05D008641 1.2e-21 107.5 137 49.6
HPP92_026375 Vanilla planifolia HOM05D006869 ORTHO05D008641 1.6e-21 107.1 138 47.1
Oeu015441.1 Olea europaea HOM05D006869 ORTHO05D008641 2.1e-21 106.7 77 71.4
Dinv25192 Davidia involucrata HOM05D006869 ORTHO05D008641 4.0e-20 102.4 167 43.1
THA.LOC104798477 Tarenaya hassleriana HOM05D006869 ORTHO05D008641 1.2e-19 100.9 143 46.9
Rhsim07G0123600 Rhododendron simsii HOM05D006869 ORTHO05D008641 4.4e-19 99.0 75 66.7
SalBow6G5905 Salvia bowleyana HOM05D006869 ORTHO05D008641 1.3e-18 97.4 74 67.6
vmacro14155 Vaccinium macrocarpon HOM05D006869 ORTHO05D008641 2.8e-18 96.3 78 62.8
Os02g0279600 Oryza sativa ssp. japonica HOM05D006869 ORTHO05D008641 3.7e-18 95.9 133 48.1
THA.LOC104798593 Tarenaya hassleriana HOM05D006869 ORTHO05D008641 4.8e-18 95.5 143 44.8
Zm00001eb024260 Zea mays HOM05D006869 ORTHO05D008641 6.3e-18 95.1 138 47.1
AT1G32370 Arabidopsis thaliana HOM05D006869 ORTHO05D008641 1.8e-17 93.6 143 46.2
Carub.0001s3075 Capsella rubella HOM05D006869 ORTHO05D008641 2.4e-17 93.2 143 45.5
Aa31LG2G13630 Aethionema arabicum HOM05D006869 ORTHO05D008641 3.1e-17 92.8 146 44.5
A09p33790 Brassica napus HOM05D006869 ORTHO05D008641 9.1e-17 91.3 149 43.6
C05p31830 Brassica napus HOM05D006869 ORTHO05D008641 9.1e-17 91.3 150 43.3
BraA09t38929Z Brassica rapa HOM05D006869 ORTHO05D008641 9.1e-17 91.3 149 43.6
Sp1g28510 Schrenkiella parvula HOM05D006869 ORTHO05D008641 9.1e-17 91.3 140 45.0
BcaC05g27275 Brassica carinata HOM05D006869 ORTHO05D008641 1.2e-16 90.9 149 43.6
BolC5t31911H Brassica oleracea HOM05D006869 ORTHO05D008641 1.2e-16 90.9 149 43.6
Thhalv10009100m.g Eutrema salsugineum HOM05D006869 ORTHO05D008641 1.6e-16 90.5 143 44.8
BcaB07g32921 Brassica carinata HOM05D006869 ORTHO05D008641 2.0e-16 90.1 149 43.6
CARHR031750 Cardamine hirsuta HOM05D006869 ORTHO05D008641 2.7e-16 89.7 143 44.8
AL1G46570 Arabidopsis lyrata HOM05D006869 ORTHO05D008641 4.5e-16 89.0 143 44.8
EL10Ac5g12174 Beta vulgaris HOM05D006869 ORTHO05D008641 1.0e-15 87.8 84 57.1
Lsat_1_v5_gn_6_67180 Lactuca sativa HOM05D006869 ORTHO05D008641 1.7e-15 87.0 70 64.3
MBI04_g13865_MAGBIO Magnolia biondii HOM05D006869 ORTHO05D008641 2.2e-15 86.7 94 54.3
Sed0006536 Sechium edule HOM05D006869 ORTHO05D008641 8.5e-15 84.7 122 45.9
SEGI_28722 Sequoiadendron giganteum HOM05D006869 ORTHO05D008641 8.5e-15 84.7 122 43.4
THA.LOC104822843 Tarenaya hassleriana HOM05D006869 ORTHO05D008641 5.5e-14 82.0 133 42.9
Ah.07g200090 Amaranthus hybridus HOM05D006869 ORTHO05D008641 2.1e-13 80.1 65 63.1
ATR0049G078 Amborella trichopoda HOM05D006869 ORTHO05D008641 8.8e-12 74.7 107 43.9
Haze_08288 Corylus avellana HOM05D006869 ORTHO05D008641 1.8e-09 67.0 127 41.7
CAN.G982.11 Capsicum annuum HOM05D006869 ORTHO05D008641 7.0e-09 65.1 59 69.5
Psat1g009440 Pisum sativum HOM05D006869 ORTHO05D008641 9.2e-09 64.7 83 50.6
PGR142G3578 Punica granatum HOM05D006869 ORTHO05D008641 2.7e-08 63.2 52 55.8
Dinv28924 Davidia involucrata HOM05D002067 ORTHO05D002244 4.5e-08 62.4 43 72.1
vmacro23515 Vaccinium macrocarpon HOM05D006869 ORTHO05D008641 7.7e-08 61.6 44 65.9
AagrBONN_evm.TU.Sc2ySwM_228.2858 Anthoceros agrestis HOM05D006869 ORTHO05D008641 1.9e-06 57.0 128 35.9


User provided reference genes

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