Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0003092g0070 Nicotiana tabacum HOM05D006333 ORTHO05D007799 3.2e-116 421.8 212 100.0
Nitab4.5_0008825g0020 Nicotiana tabacum HOM05D006333 ORTHO05D007799 2.9e-109 398.7 212 93.9
CAN.G1011.5 Capsicum annuum HOM05D006333 ORTHO05D007799 3.3e-105 385.2 212 89.2
Sopen02g004090 Solanum pennellii HOM05D006333 ORTHO05D007799 1.4e-103 379.8 212 89.6
Solyc02g014720.4 Solanum lycopersicum HOM05D006333 ORTHO05D007799 3.1e-103 378.6 212 89.2
Thecc.02G159600 Theobroma cacao HOM05D006333 ORTHO05D007799 1.2e-96 356.7 212 83.0
Peaxi162Scf00334g00421 Petunia axillaris HOM05D006333 ORTHO05D007799 1.6e-96 356.3 200 91.0
Lj3A849G43 Lonicera japonica HOM05D006333 ORTHO05D007799 2.4e-95 352.4 212 81.1
Dinv17616 Davidia involucrata HOM05D006333 ORTHO05D007799 2.0e-94 349.4 231 77.1
Hma1.2p1_0044F.1_g026090 Hydrangea macrophylla HOM05D006333 ORTHO05D007799 1.7e-93 346.3 211 79.6
COL.COLO4_08588 Corchorus olitorius HOM05D006333 ORTHO05D007799 8.4e-93 344.0 212 79.2
Ciclev10032700m.g Citrus clementina HOM05D006333 ORTHO05D007799 1.4e-92 343.2 212 78.8
CSS0049289 Camellia sinensis var. sinensis HOM05D006333 ORTHO05D007799 9.3e-92 340.5 207 81.6
GSVIVG01012055001 Vitis vinifera HOM05D006333 ORTHO05D007799 9.3e-92 340.5 207 82.1
CANSAT56G2519 Cannabis sativa HOM05D006333 ORTHO05D007799 1.6e-91 339.7 212 79.7
Hund24376 Selenicereus undatus HOM05D006333 ORTHO05D007799 2.1e-91 339.3 212 77.8
Duzib132G1109 Durio zibethinus HOM05D006333 ORTHO05D007799 4.6e-91 338.2 212 78.8
Gohir.D13G061500 Gossypium hirsutum HOM05D006333 ORTHO05D007799 1.7e-90 336.3 212 78.3
Gohir.A13G060400 Gossypium hirsutum HOM05D006333 ORTHO05D007799 2.3e-90 335.9 212 77.8
HanXRQChr12g0366301 Helianthus annuus HOM05D006333 ORTHO05D007799 2.3e-90 335.9 212 79.2
RcHm_v2.0_Chr4g0446761 Rosa chinensis HOM05D006333 ORTHO05D007799 5.1e-90 334.7 213 79.8
Rhsim09G0071800 Rhododendron simsii HOM05D006333 ORTHO05D007799 1.5e-89 333.2 212 78.3
Aqoxy3G04253 Aquilegia oxysepala HOM05D006333 ORTHO05D007799 2.5e-89 332.4 212 77.4
FvH4_4g36970 Fragaria vesca HOM05D006333 ORTHO05D007799 2.5e-89 332.4 213 78.9
Aa31LG7G2140 Aethionema arabicum HOM05D006333 ORTHO05D007799 3.3e-89 332.0 212 78.3
Gorai.013G070000 Gossypium raimondii HOM05D006333 ORTHO05D007799 4.3e-89 331.6 218 76.1
Nn5g28807 Nelumbo nucifera HOM05D006333 ORTHO05D007799 9.6e-89 330.5 212 76.9
FAN07G1904 Fragaria x ananassa HOM05D006333 ORTHO05D007799 1.3e-88 330.1 213 77.9
MSTRG.11948 Avicennia marina HOM05D006333 ORTHO05D007799 3.6e-88 328.6 212 75.9
Glyma.12G026000 Glycine max HOM05D006333 ORTHO05D007799 3.6e-88 328.6 209 77.0
CiPaw.05G169800 Carya illinoinensis HOM05D006333 ORTHO05D007799 4.8e-88 328.2 212 76.9
Sed0022709 Sechium edule HOM05D006333 ORTHO05D007799 4.8e-88 328.2 212 77.4
Manes.04G057700 Manihot esculenta HOM05D006333 ORTHO05D007799 6.2e-88 327.8 212 75.9
MBI06_g42293_MAGBIO Magnolia biondii HOM05D006333 ORTHO05D007799 8.1e-88 327.4 214 76.6
Phvul.011G028900 Phaseolus vulgaris HOM05D006333 ORTHO05D007799 1.1e-87 327.0 209 77.0
EL10Ac9g22952 Beta vulgaris HOM05D006333 ORTHO05D007799 1.4e-87 326.6 212 75.5
THA.LOC104808350 Tarenaya hassleriana HOM05D006333 ORTHO05D007799 1.8e-87 326.2 212 75.9
Prupe.1G347700 Prunus persica HOM05D006333 ORTHO05D007799 2.4e-87 325.9 216 77.3
Eucgr.J00869 Eucalyptus grandis HOM05D006333 ORTHO05D007799 5.3e-87 324.7 212 75.9
Medtr4g023480 Medicago truncatula HOM05D006333 ORTHO05D007799 5.3e-87 324.7 212 75.9
Psat7g233400 Pisum sativum HOM05D006333 ORTHO05D007799 5.3e-87 324.7 209 77.5
Lj3g0001632 Lotus japonicus HOM05D006333 ORTHO05D007799 6.9e-87 324.3 209 76.1
ECA233G4371 Erigeron canadensis HOM05D006333 ORTHO05D007799 9.0e-87 323.9 217 75.6
Ca_19901_v3 Cicer arietinum L. HOM05D006333 ORTHO05D007799 1.2e-86 323.6 209 76.1
Thhalv10008690m.g Eutrema salsugineum HOM05D006333 ORTHO05D007799 1.2e-86 323.6 212 75.9
PSO782G2700 Papaver somniferum HOM05D006333 ORTHO05D007799 1.2e-86 323.6 212 75.5
VMungo1127G0165 Vigna mungo HOM05D006333 ORTHO05D007799 1.2e-86 323.6 209 76.6
AT1G17330 Arabidopsis thaliana HOM05D006333 ORTHO05D007799 2.0e-86 322.8 209 76.6
MELO3C024016.2 Cucumis melo HOM05D006333 ORTHO05D007799 2.6e-86 322.4 212 76.9
Lsat_1_v5_gn_8_33120 Lactuca sativa HOM05D006333 ORTHO05D007799 2.6e-86 322.4 216 76.4
TWI53G1586 Tripterygium wilfordii HOM05D006333 ORTHO05D007799 2.6e-86 322.4 212 75.9
Migut.A00709 Erythranthe guttata HOM05D006333 ORTHO05D007799 4.4e-86 321.6 212 76.4
CARHR017920 Cardamine hirsuta HOM05D006333 ORTHO05D007799 9.9e-86 320.5 212 76.4
Potri.007G072000 Populus trichocarpa HOM05D006333 ORTHO05D007799 1.7e-85 319.7 212 76.9
AL1G29580 Arabidopsis lyrata HOM05D006333 ORTHO05D007799 2.2e-85 319.3 209 75.6
CsaV3_3G031750 Cucumis sativus L. HOM05D006333 ORTHO05D007799 2.9e-85 318.9 212 76.9
PGR044G2499 Punica granatum HOM05D006333 ORTHO05D007799 2.9e-85 318.9 210 75.2
Atru.chr11.1164 Acer truncatum HOM05D006333 ORTHO05D007799 4.9e-85 318.2 212 72.6
MD13G1004800 Malus domestica HOM05D006333 ORTHO05D007799 4.9e-85 318.2 206 78.2
Prupe.1G347900 Prunus persica HOM05D006333 ORTHO05D007799 4.9e-85 318.2 216 75.5
BcaC05g25649 Brassica carinata HOM05D006333 ORTHO05D007799 2.4e-84 315.8 212 75.0
BolC5t30276H Brassica oleracea HOM05D006333 ORTHO05D007799 2.4e-84 315.8 212 75.0
FAN17G3063 Fragaria x ananassa HOM05D006333 ORTHO05D007799 2.4e-84 315.8 237 70.0
Sc17g0000100 Simmondsia chinensis HOM05D006333 ORTHO05D007799 3.2e-84 315.5 212 73.1
C05p15710 Brassica napus HOM05D006333 ORTHO05D007799 7.1e-84 314.3 212 74.5
Sp1g15450 Schrenkiella parvula HOM05D006333 ORTHO05D007799 3.5e-83 312.0 212 74.5
Cfa008751 Carpinus fangiana HOM05D006333 ORTHO05D007799 4.6e-83 311.6 212 74.5
A06p13260 Brassica napus HOM05D006333 ORTHO05D007799 1.1e-81 307.0 212 73.1
BraA06t24479Z Brassica rapa HOM05D006333 ORTHO05D007799 3.3e-81 305.4 212 72.6
unitig_32.g11605 Utricularia gibba HOM05D006333 ORTHO05D007799 5.6e-81 304.7 212 70.8
Cc11_g02420 Coffea canephora HOM05D006333 ORTHO05D007799 7.3e-81 304.3 212 74.1
Carub.0001s1708 Capsella rubella HOM05D006333 ORTHO05D007799 2.8e-80 302.4 212 72.6
FAN12G1853 Fragaria x ananassa HOM05D006333 ORTHO05D007799 4.0e-79 298.5 214 72.9
CSS0015547 Camellia sinensis var. sinensis HOM05D006333 ORTHO05D007799 5.3e-79 298.1 207 74.9
Atru.chr11.2676 Acer truncatum HOM05D006333 ORTHO05D007799 3.4e-78 295.4 207 70.0
BcaB07g34033 Brassica carinata HOM05D006333 ORTHO05D007799 4.5e-78 295.0 214 70.6
Eucgr.J00870 Eucalyptus grandis HOM05D006333 ORTHO05D007799 1.3e-77 293.5 211 71.6
TPR.G9857 Trifolium pratense HOM05D006333 ORTHO05D007799 1.3e-77 293.5 193 75.1
Atru.chr11.2675 Acer truncatum HOM05D006333 ORTHO05D007799 1.7e-77 293.1 207 69.6
PSO063G3232 Papaver somniferum HOM05D006333 ORTHO05D007799 2.2e-77 292.7 246 63.4
ATR0618G379 Amborella trichopoda HOM05D006333 ORTHO05D007799 3.8e-77 292.0 213 68.1
Sabra07G0060700 Salix brachista HOM05D006333 ORTHO05D007799 4.6e-75 285.0 249 63.5
Os10g0486000 Oryza sativa ssp. japonica HOM05D006333 ORTHO05D007799 1.3e-74 283.5 214 68.2
DCAR_008496 Daucus carota HOM05D003141 ORTHO05D003633 3.0e-74 282.3 183 78.7
SGA_v2.0_scaffold146G36264 Striga asiatica HOM05D006333 ORTHO05D007799 5.6e-73 278.1 248 61.7
Ah.01g001500 Amaranthus hybridus HOM05D006333 ORTHO05D007799 2.1e-72 276.2 178 74.7
AUR62017701 Chenopodium quinoa HOM05D006333 ORTHO05D007799 1.1e-71 273.9 209 65.6
ClCG10G012010 Citrullus lanatus HOM05D006333 ORTHO05D007799 1.8e-71 273.1 195 73.8
Lalb_Chr01g0001411 Lupinus albus HOM05D006333 ORTHO05D007799 1.8e-71 273.1 209 66.5
Actinidia11766 Actinidia chinensis HOM05D006333 ORTHO05D007799 3.1e-71 272.3 215 67.0
arahy.Tifrunner.gnm1.ann1.N7V6FU Arachis hypogaea HOM05D006333 ORTHO05D007799 2.6e-70 269.2 234 63.2
arahy.Tifrunner.gnm1.ann1.A0JP3J Arachis hypogaea HOM05D006333 ORTHO05D007799 3.4e-70 268.9 214 66.4
AUR62032988 Chenopodium quinoa HOM05D006333 ORTHO05D007799 1.0e-69 267.3 207 66.2
HPP92_008575 Vanilla planifolia HOM05D006333 ORTHO05D007799 2.9e-69 265.8 214 65.9
SalBow7G0482 Salvia bowleyana HOM05D006333 ORTHO05D007799 1.5e-62 243.4 261 55.6
CDE02G3779 Ceratophyllum demersum HOM05D006333 ORTHO05D007799 6.5e-61 238.0 208 63.0
Cpa.g.sc0.135 Carica papaya HOM05D006333 ORTHO05D007799 1.0e-58 230.7 154 75.3
TAR629G0175 Trochodendron aralioides HOM05D006333 ORTHO05D007799 6.7e-58 228.0 153 74.5
SMO116G0442 Selaginella moellendorffii HOM05D006333 ORTHO05D007799 8.7e-58 227.6 214 57.5
SGA_v2.0_scaffold173G39125 Striga asiatica HOM05D006333 ORTHO05D007799 1.1e-57 227.3 160 70.6
Pp3c7_23360 Physcomitrium patens HOM05D006333 ORTHO05D007799 8.2e-56 221.1 211 55.9
Haze_11767 Corylus avellana HOM05D006333 ORTHO05D007799 2.5e-52 209.5 196 61.7
Cre05.g234647 Chlamydomonas reinhardtii HOM05D006333 ORTHO05D007799 5.5e-52 208.4 220 53.6
Actinidia13050 Actinidia chinensis HOM05D006333 ORTHO05D007799 1.3e-48 197.2 201 57.2
vmacro16037 Vaccinium macrocarpon HOM05D006333 ORTHO05D007799 6.3e-48 194.9 120 80.0
Zm00001eb045350 Zea mays HOM05D006333 ORTHO05D007799 1.1e-47 194.1 143 67.1
MCO07G572 Micromonas commoda HOM05D006333 ORTHO05D007799 7.2e-44 181.4 214 49.5
PRCOL_00000482 Prasinoderma coloniale HOM05D006333 ORTHO05D007799 3.1e-39 166.0 213 45.1
Mapoly0006s0058 Marchantia polymorpha HOM05D006333 ORTHO05D007799 2.6e-38 162.9 150 55.3
QL03p044200 Quercus lobata HOM05D006333 ORTHO05D007799 4.0e-34 149.1 85 84.7
CBR_g5629 Chara braunii HOM05D006333 ORTHO05D007799 7.5e-33 144.8 368 32.1
SalBow1G5083 Salvia bowleyana HOM05D006333 ORTHO05D007799 9.7e-33 144.4 104 70.2
Ah.05g173900 Amaranthus hybridus HOM05D006333 ORTHO05D007799 8.0e-27 124.8 84 67.9
Thecc.08G107200 Theobroma cacao HOM05D006333 ORTHO05D007799 1.0e-21 107.8 70 72.9
Aa31sc968G10 Aethionema arabicum HOM05D006333 ORTHO05D007799 1.2e-19 100.9 133 46.6
Haze_06289 Corylus avellana HOM05D006333 ORTHO05D007799 1.4e-18 97.4 51 92.2
QL03p044193 Quercus lobata HOM05D006333 ORTHO05D007799 5.2e-18 95.5 97 51.5
SalBow1G0042 Salvia bowleyana HOM05D006333 ORTHO05D007799 5.2e-18 95.5 55 85.5
Oeu044913.1 Olea europaea HOM05D006333 ORTHO05D007799 9.8e-17 91.3 54 87.0
Haze_18642 Corylus avellana HOM05D006333 ORTHO05D007799 1.3e-16 90.9 70 70.0
Cpa.g.sc0.136 Carica papaya HOM05D006333 ORTHO05D007799 5.4e-15 85.5 54 79.6
Cfa024705 Carpinus fangiana HOM05D006333 ORTHO05D007799 1.5e-12 77.4 195 31.3
MBI06_g42292_MAGBIO Magnolia biondii HOM05D006333 ORTHO05D007799 3.3e-12 76.3 45 80.0
Cfa023716 Carpinus fangiana HOM05D006333 ORTHO05D007799 8.9e-10 68.2 284 26.1
TAR629G1621 Trochodendron aralioides HOM05D006333 ORTHO05D007799 4.4e-09 65.9 44 75.0
Aa31sc286G50 Aethionema arabicum HOM05D006333 ORTHO05D007799 1.2e-06 57.8 33 81.8
Aa31LG4G11880 Aethionema arabicum HOM05D006333 ORTHO05D007799 3.5e-06 56.2 45 64.4


User provided reference genes

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