Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0003086g0070 Nicotiana tabacum HOM05D007471 ORTHO05D009481 4.1e-148 528.1 276 100.0
Solyc07g045150.3 Solanum lycopersicum HOM05D007471 ORTHO05D009481 5.8e-110 401.4 242 85.5
Sopen07g023700 Solanum pennellii HOM05D007471 ORTHO05D009481 5.8e-110 401.4 242 85.1
PGSC0003DMG402017414 Solanum tuberosum HOM05D007471 ORTHO05D009481 3.7e-109 398.7 242 84.3
Peaxi162Scf00359g00320 Petunia axillaris HOM05D007471 ORTHO05D009481 2.3e-106 389.4 242 81.0
CAN.G826.3 Capsicum annuum HOM05D007471 ORTHO05D009481 5.2e-103 378.3 242 81.4
Dinv05327 Davidia involucrata HOM05D007471 ORTHO05D009481 9.6e-73 277.7 243 56.4
Actinidia12353 Actinidia chinensis HOM05D007471 ORTHO05D009481 7.6e-70 268.1 242 55.0
Cpa.g.sc136.59 Carica papaya HOM05D007471 ORTHO05D009481 9.9e-70 267.7 242 53.7
TAR626G0037 Trochodendron aralioides HOM05D007471 ORTHO05D009481 6.4e-69 265.0 243 53.5
CSS0003771 Camellia sinensis var. sinensis HOM05D007471 ORTHO05D009481 1.1e-68 264.2 243 53.9
Lj8A138T38 Lonicera japonica HOM05D007471 ORTHO05D009481 2.4e-68 263.1 243 54.7
QL04p066931 Quercus lobata HOM05D007471 ORTHO05D009481 1.2e-67 260.8 242 53.3
RcHm_v2.0_Chr2g0155251 Rosa chinensis HOM05D007471 ORTHO05D009481 2.3e-66 256.5 244 54.1
Hma1.2p1_0599F.1_g186930 Hydrangea macrophylla HOM05D007471 ORTHO05D009481 1.9e-65 253.4 243 52.3
MSTRG.6626 Avicennia marina HOM05D007471 ORTHO05D009481 9.6e-65 251.1 243 55.6
FAN05G3962 Fragaria x ananassa HOM05D007471 ORTHO05D009481 1.3e-64 250.8 243 52.3
Manes.12G067200 Manihot esculenta HOM05D007471 ORTHO05D009481 2.1e-64 250.0 243 49.0
Rhsim06G0179200 Rhododendron simsii HOM05D000358 ORTHO05D001562 1.1e-63 247.7 252 50.4
FvH4_6g40230 Fragaria vesca HOM05D007471 ORTHO05D009481 1.4e-63 247.3 243 51.9
MD17G1121200 Malus domestica HOM05D007471 ORTHO05D009481 4.0e-63 245.7 243 51.4
FAN14G4986 Fragaria x ananassa HOM05D007471 ORTHO05D009481 5.3e-63 245.4 243 51.9
PSO210G0038 Papaver somniferum HOM05D007471 ORTHO05D009481 5.3e-63 245.4 243 49.8
FAN09G1454 Fragaria x ananassa HOM05D007471 ORTHO05D009481 6.9e-63 245.0 243 52.3
Cc05_g01930 Coffea canephora HOM05D007471 ORTHO05D009481 2.6e-62 243.0 245 50.6
SalBow7G1274 Salvia bowleyana HOM05D007471 ORTHO05D009481 3.4e-62 242.7 242 54.1
Lalb_Chr10g0094201 Lupinus albus HOM05D007471 ORTHO05D009481 4.5e-62 242.3 246 48.8
Migut.M00062 Erythranthe guttata HOM05D007471 ORTHO05D009481 7.6e-62 241.5 242 53.3
PSO210G4841 Papaver somniferum HOM05D007471 ORTHO05D009481 2.9e-61 239.6 246 49.2
MD17G1122600 Malus domestica HOM05D007471 ORTHO05D009481 3.8e-61 239.2 243 50.2
Eucgr.K01386 Eucalyptus grandis HOM05D007471 ORTHO05D009481 8.4e-61 238.0 246 48.8
Nn1g07565 Nelumbo nucifera HOM05D007471 ORTHO05D009481 2.1e-59 233.4 243 48.1
MBI14_g27042_MAGBIO Magnolia biondii HOM05D007471 ORTHO05D009481 3.5e-59 232.6 232 50.9
Haze_12583 Corylus avellana HOM05D007471 ORTHO05D009481 3.9e-58 229.2 242 49.2
Lj6g0025127 Lotus japonicus HOM05D007471 ORTHO05D009481 5.1e-58 228.8 244 48.8
CARHR082340 Cardamine hirsuta HOM05D007471 ORTHO05D009481 6.7e-58 228.4 243 46.5
Ciclev10016450m.g Citrus clementina HOM05D007471 ORTHO05D009481 8.7e-58 228.0 244 48.8
AL3G19000 Arabidopsis lyrata HOM05D007471 ORTHO05D009481 1.1e-57 227.6 243 45.3
Sc21g0000400 Simmondsia chinensis HOM05D007471 ORTHO05D009481 4.3e-57 225.7 245 48.6
TWI36G0936 Tripterygium wilfordii HOM05D007471 ORTHO05D009481 1.3e-56 224.2 242 46.3
BcaB03g14688 Brassica carinata HOM05D007471 ORTHO05D009481 1.6e-56 223.8 243 44.9
Oeu000672.1 Olea europaea HOM05D007471 ORTHO05D009481 1.6e-56 223.8 200 55.5
THA.LOC104819026 Tarenaya hassleriana HOM05D007471 ORTHO05D009481 2.1e-56 223.4 245 46.9
Psat1g019920 Pisum sativum HOM05D007471 ORTHO05D009481 3.7e-56 222.6 244 45.5
Glyma.09G086000 Glycine max HOM05D007471 ORTHO05D009481 6.2e-56 221.9 244 44.7
AT3G07640 Arabidopsis thaliana HOM05D007471 ORTHO05D009481 8.2e-56 221.5 244 44.7
Thhalv10021420m.g Eutrema salsugineum HOM05D007471 ORTHO05D009481 8.2e-56 221.5 243 44.9
Sp3g06580 Schrenkiella parvula HOM05D007471 ORTHO05D009481 3.1e-55 219.5 243 43.2
PGR044G0015 Punica granatum HOM05D007471 ORTHO05D009481 4.0e-55 219.2 242 44.6
Carub.0003s0722 Capsella rubella HOM05D007471 ORTHO05D009481 1.5e-54 217.2 245 45.7
HanXRQChr09g0257421 Helianthus annuus HOM05D007471 ORTHO05D009481 2.0e-54 216.9 244 48.0
GSVIVG01030129001 Vitis vinifera HOM05D007471 ORTHO05D009481 3.4e-54 216.1 242 47.1
A03p35390 Brassica napus HOM05D007471 ORTHO05D009481 1.0e-53 214.5 243 44.4
BraA03t12717Z Brassica rapa HOM05D007471 ORTHO05D009481 1.0e-53 214.5 243 44.4
BolC3t16568H Brassica oleracea HOM05D007471 ORTHO05D009481 2.2e-53 213.4 243 44.9
Glyma.15G195100 Glycine max HOM05D007471 ORTHO05D009481 2.2e-53 213.4 243 43.6
Lsat_1_v5_gn_9_102921 Lactuca sativa HOM05D007471 ORTHO05D009481 2.2e-53 213.4 243 48.1
BcaC01g04271 Brassica carinata HOM05D007471 ORTHO05D009481 2.9e-53 213.0 243 44.9
C03p43000 Brassica napus HOM05D007471 ORTHO05D009481 2.9e-53 213.0 243 44.9
ECA240G3131 Erigeron canadensis HOM05D001349 ORTHO05D001980 4.9e-53 212.2 246 48.8
vmacro12060 Vaccinium macrocarpon HOM05D007471 ORTHO05D009481 1.9e-52 210.3 201 52.2
Aa31LG5G18220 Aethionema arabicum HOM05D007471 ORTHO05D009481 2.5e-52 209.9 266 41.7
CsaV3_7G002330 Cucumis sativus L. HOM05D007471 ORTHO05D009481 5.5e-52 208.8 247 42.5
MELO3C024177.2 Cucumis melo HOM05D007471 ORTHO05D009481 1.2e-51 207.6 247 42.5
Sed0023252 Sechium edule HOM05D007471 ORTHO05D009481 2.1e-51 206.8 244 42.2
VMungo1309G3041 Vigna mungo HOM05D007471 ORTHO05D009481 1.0e-50 204.5 244 45.5
Medtr2g049140 Medicago truncatula HOM05D007471 ORTHO05D009481 3.0e-50 203.0 243 43.2
Phvul.009G214800 Phaseolus vulgaris HOM05D007471 ORTHO05D009481 1.5e-49 200.7 244 44.3
AUR62018237 Chenopodium quinoa HOM05D007471 ORTHO05D009481 1.8e-47 193.7 243 42.8
ATR0751G158 Amborella trichopoda HOM05D007471 ORTHO05D009481 4.1e-47 192.6 243 41.6
DCAR_019662 Daucus carota HOM05D007471 ORTHO05D009481 6.9e-47 191.8 205 46.3
Ca_02565_v3 Cicer arietinum L. HOM05D007471 ORTHO05D009481 9.0e-47 191.4 222 44.6
AUR62037766 Chenopodium quinoa HOM05D007471 ORTHO05D009481 6.5e-45 185.3 243 40.3
Prupe.3G192700 Prunus persica HOM05D007471 ORTHO05D009481 5.5e-44 182.2 174 50.0
Atru.BG.43.p Acer truncatum HOM05D007471 ORTHO05D009481 1.2e-43 181.0 188 47.3
CSS0004770 Camellia sinensis var. sinensis HOM05D007471 ORTHO05D009481 2.7e-43 179.9 168 51.8
Cfa014199 Carpinus fangiana HOM05D005171 ORTHO05D006343 2.7e-43 179.9 238 42.0
Os02g0582400 Oryza sativa ssp. japonica HOM05D007471 ORTHO05D009481 6.7e-42 175.3 240 37.5
ClCG02G003070 Citrullus lanatus HOM05D007471 ORTHO05D009481 8.8e-42 174.9 292 34.2
Phvul.009G215100 Phaseolus vulgaris HOM05D007471 ORTHO05D009481 7.4e-41 171.8 244 40.2
THA.LOC104822442 Tarenaya hassleriana HOM05D007471 ORTHO05D009481 2.2e-40 170.2 246 38.2
BcaB03g14686 Brassica carinata HOM05D007471 ORTHO05D009481 3.1e-39 166.4 185 46.5
CDE11G0370 Ceratophyllum demersum HOM05D007471 ORTHO05D009481 4.1e-39 166.0 251 37.5
Zm00001eb245410 Zea mays HOM05D007471 ORTHO05D009481 5.3e-39 165.6 242 34.7
Gohir.D07G199700 Gossypium hirsutum HOM05D007471 ORTHO05D009481 3.4e-38 162.9 253 38.3
Gorai.001G223900 Gossypium raimondii HOM05D007471 ORTHO05D009481 1.3e-37 161.0 253 37.9
Gohir.A07G193500 Gossypium hirsutum HOM05D007471 ORTHO05D009481 1.7e-37 160.6 253 38.3
Duzib133G1025 Durio zibethinus HOM05D007471 ORTHO05D009481 8.5e-37 158.3 248 38.3
FAN02G2672 Fragaria x ananassa HOM05D007471 ORTHO05D009481 3.2e-36 156.4 243 37.9
SGA_v2.0_scaffold73G24486 Striga asiatica HOM05D007471 ORTHO05D009481 4.2e-36 156.0 235 40.4
Thecc.01G199800 Theobroma cacao HOM05D007471 ORTHO05D009481 1.8e-34 150.6 248 37.9
MBI14_g39587_MAGBIO Magnolia biondii HOM05D007471 ORTHO05D009481 5.1e-34 149.1 237 37.6
Peaxi162Scf00289g00310 Petunia axillaris HOM05D007471 ORTHO05D009481 8.8e-34 148.3 95 81.1
TPR.G20279 Trifolium pratense HOM05D007471 ORTHO05D009481 2.0e-33 147.1 175 41.1
SHI10184 Sapria himalayana HOM05D007471 ORTHO05D009481 1.4e-28 131.0 166 40.4
TPR.G28406 Trifolium pratense HOM05D007471 ORTHO05D009481 3.2e-28 129.8 203 35.0
COL.COLO4_19658 Corchorus olitorius HOM05D007471 ORTHO05D009481 2.7e-27 126.7 175 39.4
SEGI_00651 Sequoiadendron giganteum HOM05D007471 ORTHO05D009481 1.8e-23 114.0 247 30.8
Peaxi162Scf00289g00039 Petunia axillaris HOM05D007471 ORTHO05D009481 4.8e-16 89.4 57 77.2
FAN05G5088 Fragaria x ananassa HOM05D000100 ORTHO05D000052 4.4e-09 66.2 71 47.9
ClCG02G003080 Citrullus lanatus HOM05D007471 ORTHO05D009481 9.8e-09 65.1 72 45.8
Ah.10g032600 Amaranthus hybridus HOM05D007471 ORTHO05D009481 1.3e-08 64.7 69 44.9
Lsat_1_v5_gn_3_93600 Lactuca sativa HOM05D007471 ORTHO05D233800 9.1e-07 58.5 69 42.0


User provided reference genes

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