Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0003079g0010 Nicotiana tabacum HOM05D007850 ORTHO05D009594 6.1e-36 153.7 80 100.0
Nitab4.5_0000566g0200 Nicotiana tabacum HOM05D007850 ORTHO05D009594 1.6e-33 145.6 80 95.0
Peaxi162Scf00944g00009 Petunia axillaris HOM05D007850 ORTHO05D009594 2.8e-25 118.2 79 82.3
PGSC0003DMG400000292 Solanum tuberosum HOM05D007850 ORTHO05D009594 9.1e-24 113.2 75 77.3
Solyc12g008560.1 Solanum lycopersicum HOM05D007850 ORTHO05D009594 1.5e-23 112.5 78 74.4
Cc06_g10600 Coffea canephora HOM05D007850 ORTHO05D009594 4.4e-18 94.4 78 62.8
Sopen12g003500 Solanum pennellii HOM05D007850 ORTHO05D009594 9.7e-18 93.2 78 67.9
CAN.G1591.18 Capsicum annuum HOM05D007850 ORTHO05D009594 3.7e-17 91.3 76 68.4
CAN.G2021.4 Capsicum annuum HOM05D007850 ORTHO05D009594 3.7e-17 91.3 76 68.4
Hma1.2p1_0208F.1_g088080 Hydrangea macrophylla HOM05D007850 ORTHO05D009594 6.3e-17 90.5 74 62.2
Manes.03G028100 Manihot esculenta HOM05D007850 ORTHO05D009594 6.3e-17 90.5 79 63.3
Cpa.g.sc78.26 Carica papaya HOM05D007850 ORTHO05D009594 1.8e-16 89.0 74 68.9
Eucgr.K01055 Eucalyptus grandis HOM05D007850 ORTHO05D009594 2.4e-16 88.6 76 63.2
CAN.G1357.32 Capsicum annuum HOM05D007850 ORTHO05D009594 5.3e-16 87.4 76 67.1
CAN.G1677.12 Capsicum annuum HOM05D007850 ORTHO05D009594 5.3e-16 87.4 78 64.1
ClCG03G016060 Citrullus lanatus HOM05D007850 ORTHO05D009594 7.0e-16 87.0 74 70.3
Potri.015G106700 Populus trichocarpa HOM05D007850 ORTHO05D009594 9.1e-16 86.7 77 64.9
CAN.G1084.1 Capsicum annuum HOM05D007850 ORTHO05D009594 1.2e-15 86.3 76 67.1
CAN.G1349.15 Capsicum annuum HOM05D007850 ORTHO05D009594 2.0e-15 85.5 76 65.8
CSS0000041 Camellia sinensis var. sinensis HOM05D007850 ORTHO05D009594 2.6e-15 85.1 83 63.9
Gohir.A07G009000 Gossypium hirsutum HOM05D007850 ORTHO05D009594 2.6e-15 85.1 74 68.9
Gohir.D07G009300 Gossypium hirsutum HOM05D007850 ORTHO05D009594 2.6e-15 85.1 74 68.9
Gorai.001G009500 Gossypium raimondii HOM05D007850 ORTHO05D009594 2.6e-15 85.1 74 68.9
Haze_25835 Corylus avellana HOM05D007850 ORTHO05D009594 3.5e-15 84.7 74 66.2
Lalb_Chr22g0352511 Lupinus albus HOM05D007850 ORTHO05D009594 4.5e-15 84.3 71 63.4
Duzib168G0149 Durio zibethinus HOM05D007850 ORTHO05D009594 7.7e-15 83.6 74 66.2
Cfa003164 Carpinus fangiana HOM05D007850 ORTHO05D009594 1.3e-14 82.8 77 63.6
arahy.Tifrunner.gnm1.ann1.X02Y3Q Arachis hypogaea HOM05D007850 ORTHO05D009594 2.2e-14 82.0 74 59.5
SalBow6G1226 Salvia bowleyana HOM05D007850 ORTHO05D009594 2.2e-14 82.0 74 58.1
Gohir.D08G264200 Gossypium hirsutum HOM05D007850 ORTHO05D009594 3.8e-14 81.3 77 64.9
Gorai.004G282100 Gossypium raimondii HOM05D007850 ORTHO05D009594 3.8e-14 81.3 77 64.9
Nn8g39046 Nelumbo nucifera HOM05D007850 ORTHO05D009594 8.5e-14 80.1 76 61.8
Sabra12G0079700 Salix brachista HOM05D007850 ORTHO05D009594 8.5e-14 80.1 69 62.3
MELO3C015421.2 Cucumis melo HOM05D007850 ORTHO05D009594 1.1e-13 79.7 74 64.9
arahy.Tifrunner.gnm1.ann1.X1KXE8 Arachis hypogaea HOM05D012186 ORTHO05D009594 1.5e-13 79.3 79 55.7
QL08p048105 Quercus lobata HOM05D007850 ORTHO05D009594 1.5e-13 79.3 77 61.0
Thecc.09G099000 Theobroma cacao HOM05D007850 ORTHO05D009594 1.5e-13 79.3 74 63.5
Phvul.004G174800 Phaseolus vulgaris HOM05D007850 ORTHO05D009594 2.5e-13 78.6 74 60.8
Prupe.7G218200 Prunus persica HOM05D007850 ORTHO05D009594 2.5e-13 78.6 83 57.8
TAR624G0098 Trochodendron aralioides HOM05D007850 ORTHO05D009594 3.2e-13 78.2 74 59.5
Gohir.A08G243300 Gossypium hirsutum HOM05D007850 ORTHO05D009594 4.2e-13 77.8 77 63.6
Sed0003200 Sechium edule HOM05D007850 ORTHO05D009594 4.2e-13 77.8 74 62.2
Psat1g048160 Pisum sativum HOM05D007850 ORTHO05D009594 5.5e-13 77.4 74 59.5
Rhsim05G0038300 Rhododendron simsii HOM05D007850 ORTHO05D009594 5.5e-13 77.4 78 56.4
DCAR_000091 Daucus carota HOM05D007850 ORTHO05D009594 7.2e-13 77.0 84 56.0
DCAR_012032 Daucus carota HOM05D007850 ORTHO05D009594 7.2e-13 77.0 84 56.0
Glyma.07G125500 Glycine max HOM05D007850 ORTHO05D009594 7.2e-13 77.0 74 58.1
Gohir.A06G068000 Gossypium hirsutum HOM05D007850 ORTHO05D009594 7.2e-13 77.0 74 60.8
DCAR_012035 Daucus carota HOM05D007850 ORTHO05D009594 9.4e-13 76.6 84 54.8
Actinidia17514 Actinidia chinensis HOM05D007850 ORTHO05D009594 2.1e-12 75.5 75 60.0
CANSAT56G2953 Cannabis sativa HOM05D007850 ORTHO05D009594 2.1e-12 75.5 76 59.2
Ciclev10010071m.g Citrus clementina HOM05D007850 ORTHO05D009594 2.1e-12 75.5 78 57.7
Lsat_1_v5_gn_7_39541 Lactuca sativa HOM05D007850 ORTHO05D009594 2.1e-12 75.5 55 69.1
Ca_25585_v3 Cicer arietinum L. HOM05D007850 ORTHO05D009594 3.6e-12 74.7 74 58.1
Gohir.D06G066600 Gossypium hirsutum HOM05D007850 ORTHO05D009594 4.7e-12 74.3 74 59.5
Gorai.010G078100 Gossypium raimondii HOM05D007850 ORTHO05D009594 4.7e-12 74.3 74 59.5
FvH4_1g06390 Fragaria vesca HOM05D007850 ORTHO05D009594 6.1e-12 73.9 69 62.3
FAN19G1200 Fragaria x ananassa HOM05D007850 ORTHO05D009594 6.1e-12 73.9 69 62.3
RcHm_v2.0_Chr2g0092131 Rosa chinensis HOM05D007850 ORTHO05D009594 6.1e-12 73.9 76 60.5
Ciclev10006350m.g Citrus clementina HOM05D007850 ORTHO05D009594 8.0e-12 73.6 78 57.7
Glyma.01G006200 Glycine max HOM05D007850 ORTHO05D009594 1.0e-11 73.2 77 55.8
QL03p050300 Quercus lobata HOM05D007850 ORTHO05D009594 1.0e-11 73.2 77 58.4
EL10Ac8g18368 Beta vulgaris HOM05D007850 ORTHO05D009594 1.4e-11 72.8 75 56.0
FAN23G2338 Fragaria x ananassa HOM05D007850 ORTHO05D009594 1.4e-11 72.8 69 60.9
FAN26G0602 Fragaria x ananassa HOM05D007850 ORTHO05D009594 1.4e-11 72.8 69 60.9
FAN26G2005 Fragaria x ananassa HOM05D007850 ORTHO05D009594 1.4e-11 72.8 69 60.9
FAN28G1089 Fragaria x ananassa HOM05D007850 ORTHO05D009594 1.8e-11 72.4 69 60.9
Lj2g0008653 Lotus japonicus HOM05D007850 ORTHO05D009594 1.8e-11 72.4 74 54.1
Sc18g0001560 Simmondsia chinensis HOM05D007850 ORTHO05D009594 4.0e-11 71.2 75 54.7
CsaV3_1G039900 Cucumis sativus L. HOM05D007850 ORTHO05D009594 6.7e-11 70.5 55 74.5
Medtr6g090490 Medicago truncatula HOM05D007850 ORTHO05D009594 6.7e-11 70.5 77 50.6
COL.COLO4_34726 Corchorus olitorius HOM05D007850 ORTHO05D009594 2.0e-10 68.9 55 69.1
AUR62010878 Chenopodium quinoa HOM05D007850 ORTHO05D009594 3.7e-09 64.7 75 52.0
TPR.G33528 Trifolium pratense HOM05D007850 ORTHO05D009594 3.7e-09 64.7 77 50.6
Aqoxy7G01385 Aquilegia oxysepala HOM05D007850 ORTHO05D009594 1.4e-08 62.8 70 50.0
CDE06G1893 Ceratophyllum demersum HOM05D007850 ORTHO05D009594 2.4e-08 62.0 35 82.9
unitig_8.g4473 Utricularia gibba HOM05D007850 ORTHO05D009594 2.4e-08 62.0 72 48.6
Ah.09g230500 Amaranthus hybridus HOM05D007850 ORTHO05D009594 3.1e-08 61.6 77 48.1
AUR62021391 Chenopodium quinoa HOM05D007850 ORTHO05D009594 3.1e-08 61.6 75 50.7
ECA240G2374 Erigeron canadensis HOM05D004751 ORTHO05D005819 7.0e-08 60.5 55 60.0
ATR0705G131 Amborella trichopoda HOM05D007850 ORTHO05D009594 1.0e-06 56.6 72 44.4
arahy.Tifrunner.gnm1.ann1.1KH3J5 Arachis hypogaea HOM05D007850 ORTHO05D009594 3.8e-06 54.7 73 43.8
arahy.Tifrunner.gnm1.ann1.THK1KM Arachis hypogaea HOM05D007850 ORTHO05D009594 3.8e-06 54.7 73 43.8
SEGI_13362 Sequoiadendron giganteum HOM05D007850 ORTHO05D009594 3.8e-06 54.7 55 54.5


User provided reference genes

Program Settings