Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0003077g0030 Nicotiana tabacum HOM05D006105 ORTHO05D006345 1.0e-241 839.7 438 100.0
Nitab4.5_0005445g0040 Nicotiana tabacum HOM05D006105 ORTHO05D006345 1.6e-191 672.9 438 82.4
Sopen12g005900 Solanum pennellii HOM05D006105 ORTHO05D006345 1.7e-140 503.4 463 64.6
PGSC0003DMG400015376 Solanum tuberosum HOM05D006105 ORTHO05D006345 3.7e-135 485.7 499 60.3
Peaxi162Scf00000g02515 Petunia axillaris HOM05D006105 ORTHO05D006345 2.9e-132 476.1 429 66.9
Solyc12g014120.3 Solanum lycopersicum HOM05D006105 ORTHO05D006345 1.6e-90 337.4 292 63.7
Nitab4.5_0003202g0040 Nicotiana tabacum HOM05D006105 ORTHO05D006345 1.8e-81 307.4 443 46.0
Peaxi162Scf00069g01930 Petunia axillaris HOM05D006105 ORTHO05D006345 1.3e-71 274.6 451 40.6
Nitab4.5_0000246g0110 Nicotiana tabacum HOM05D006105 ORTHO05D006345 4.0e-65 253.1 453 41.5
Dinv14962 Davidia involucrata HOM05D006105 ORTHO05D006345 2.1e-61 240.7 389 41.9
CSS0022090 Camellia sinensis var. sinensis HOM05D006105 ORTHO05D006345 2.5e-59 233.8 469 41.8
Actinidia35226 Actinidia chinensis HOM05D006105 ORTHO05D006345 6.2e-58 229.2 452 40.3
CSS0026032 Camellia sinensis var. sinensis HOM05D006105 ORTHO05D006345 4.9e-55 219.5 457 39.4
Actinidia18787 Actinidia chinensis HOM05D006105 ORTHO05D006345 5.4e-54 216.1 449 40.1
Solyc07g062685.2 Solanum lycopersicum HOM05D006105 ORTHO05D006345 3.0e-52 210.3 424 39.4
Oeu005394.1 Olea europaea HOM05D006105 ORTHO05D006345 5.6e-51 206.1 419 37.2
DCAR_019586 Daucus carota HOM05D006105 ORTHO05D006345 2.8e-50 203.8 436 34.6
Sopen07g030920 Solanum pennellii HOM05D006105 ORTHO05D006345 1.4e-49 201.4 420 39.0
Hma1.2p1_0688F.1_g203660 Hydrangea macrophylla HOM05D006105 ORTHO05D006345 2.4e-49 200.7 418 37.8
Hma1.2p1_0416F.1_g148610 Hydrangea macrophylla HOM05D006105 ORTHO05D006345 4.0e-49 199.9 421 37.8
PGSC0003DMG400021273 Solanum tuberosum HOM05D006105 ORTHO05D006345 4.5e-48 196.4 419 37.9
Prupe.4G171200 Prunus persica HOM05D006105 ORTHO05D006345 3.5e-45 186.8 473 35.1
MSTRG.14216 Avicennia marina HOM05D006105 ORTHO05D006345 1.9e-43 181.0 420 36.2
MSTRG.14950 Avicennia marina HOM05D006105 ORTHO05D006345 3.3e-43 180.3 411 34.5
Actinidia07497 Actinidia chinensis HOM05D006105 ORTHO05D006345 7.4e-43 179.1 419 36.8
Lj8A152T79 Lonicera japonica HOM05D006105 ORTHO05D006345 1.3e-42 178.3 365 37.8
Rhsim04G0024000 Rhododendron simsii HOM05D006105 ORTHO05D006345 4.8e-42 176.4 468 35.5
ECA234G3938 Erigeron canadensis HOM05D006105 ORTHO05D006345 1.1e-41 175.3 466 38.0
Dinv18338 Davidia involucrata HOM05D006105 ORTHO05D006345 3.2e-38 163.7 344 37.8
QL08p027367 Quercus lobata HOM05D006105 ORTHO05D006345 4.2e-38 163.3 437 34.1
HanXRQChr10g0304731 Helianthus annuus HOM05D006105 ORTHO05D006345 4.6e-37 159.8 467 36.6
Lsat_1_v5_gn_5_129201 Lactuca sativa HOM05D006105 ORTHO05D006345 8.7e-36 155.6 457 35.9
Oeu059277.1 Olea europaea HOM05D006105 ORTHO05D006345 6.3e-34 149.4 423 31.4
Rhsim06G0204700 Rhododendron simsii HOM05D006105 ORTHO05D006345 2.4e-33 147.5 460 34.6
Cc05_g11450 Coffea canephora HOM05D006105 ORTHO05D006345 4.5e-32 143.3 263 38.8
Sopen10g003350 Solanum pennellii HOM05D016660 ORTHO05D006345 4.5e-32 143.3 179 49.7
CiPaw.11G164300 Carya illinoinensis HOM05D006105 ORTHO05D006345 1.3e-31 141.7 361 34.9
Cpa.g.sc131.73 Carica papaya HOM05D006105 ORTHO05D006345 6.5e-31 139.4 455 32.7
MD03G1238800 Malus domestica HOM05D006105 ORTHO05D006345 1.9e-30 137.9 443 30.9
Haze_09360 Corylus avellana HOM05D006105 ORTHO05D006345 3.2e-30 137.1 433 31.6
PGSC0003DMG400012397 Solanum tuberosum HOM05D006105 ORTHO05D006345 3.5e-29 133.7 191 46.6
Ciclev10010617m.g Citrus clementina HOM05D006105 ORTHO05D006345 6.1e-29 132.9 456 31.6
Solyc10g007156.2 Solanum lycopersicum HOM05D016660 ORTHO05D006345 1.0e-28 132.1 167 49.1
Manes.03G103501 Manihot esculenta HOM05D006105 ORTHO05D006345 1.3e-28 131.7 431 32.5
Duzib213G0100 Durio zibethinus HOM05D006105 ORTHO05D006345 2.3e-28 131.0 469 31.8
Cfa019604 Carpinus fangiana HOM05D006105 ORTHO05D006345 3.0e-28 130.6 419 31.0
CiPaw.12G115300 Carya illinoinensis HOM05D006105 ORTHO05D006345 3.0e-28 130.6 426 31.5
GSVIVG01014239001 Vitis vinifera HOM05D006105 ORTHO05D006345 3.0e-28 130.6 420 31.2
DCAR_013141 Daucus carota HOM05D006105 ORTHO05D006345 8.7e-28 129.0 440 31.8
Duzib268G0903 Durio zibethinus HOM05D006105 ORTHO05D006345 8.7e-28 129.0 446 33.0
FAN21G1974 Fragaria x ananassa HOM05D006105 ORTHO05D006345 1.1e-27 128.6 447 33.1
CSS0004572 Camellia sinensis var. sinensis HOM05D006105 ORTHO05D006345 1.9e-27 127.9 184 44.0
VMungo1080G1877 Vigna mungo HOM05D006105 ORTHO05D006345 7.4e-27 125.9 422 32.2
Gohir.A08G021700 Gossypium hirsutum HOM05D006105 ORTHO05D006345 9.7e-27 125.6 459 32.7
FvH4_3g18750 Fragaria vesca HOM05D006105 ORTHO05D006345 3.7e-26 123.6 447 32.0
Gorai.004G029900 Gossypium raimondii HOM05D006105 ORTHO05D006345 3.7e-26 123.6 454 33.0
Thecc.07G103600 Theobroma cacao HOM05D006105 ORTHO05D006345 3.7e-26 123.6 459 32.0
FAN25G1303 Fragaria x ananassa HOM05D006105 ORTHO05D006345 6.3e-26 122.9 447 31.3
Phvul.005G068000 Phaseolus vulgaris HOM05D006105 ORTHO05D006345 2.4e-25 120.9 420 31.9
Glyma.13G271900 Glycine max HOM05D006105 ORTHO05D006345 3.1e-25 120.6 426 33.1
Gohir.D08G032500 Gossypium hirsutum HOM05D006105 ORTHO05D006345 5.3e-25 119.8 455 32.7
Oeu061338.1 Olea europaea HOM05D006105 ORTHO05D006345 5.3e-25 119.8 179 45.3
AUR62037870 Chenopodium quinoa HOM05D006105 ORTHO05D006345 2.0e-24 117.9 419 30.1
FAN16G1829 Fragaria x ananassa HOM05D006105 ORTHO05D006345 3.4e-24 117.1 448 31.5
Sc03g0010360 Simmondsia chinensis HOM05D006105 ORTHO05D006345 4.5e-24 116.7 383 31.1
FAN11G0448 Fragaria x ananassa HOM05D006105 ORTHO05D006345 5.9e-24 116.3 447 32.0
DCAR_021012 Daucus carota HOM05D006105 ORTHO05D006345 1.3e-23 115.2 378 30.2
Potri.001G375600 Populus trichocarpa HOM05D006105 ORTHO05D006345 1.7e-23 114.8 453 29.4
Glyma.12G228100 Glycine max HOM05D006105 ORTHO05D006345 5.0e-23 113.2 422 30.6
HanXRQChr12g0372831 Helianthus annuus HOM05D006105 ORTHO05D006345 4.2e-22 110.2 438 30.8
TPR.G9213 Trifolium pratense HOM05D006105 ORTHO05D006345 5.5e-22 109.8 432 29.6
Nn1g09023 Nelumbo nucifera HOM05D006105 ORTHO05D006345 7.2e-22 109.4 381 31.5
RcHm_v2.0_Chr5g0031561 Rosa chinensis HOM05D006105 ORTHO05D006345 9.4e-22 109.0 444 30.9
TAR629G0423 Trochodendron aralioides HOM05D000109 ORTHO05D000965 1.6e-21 108.2 422 30.6
COL.COLO4_17616 Corchorus olitorius HOM05D006105 ORTHO05D006345 2.1e-21 107.8 460 30.2
AUR62019562 Chenopodium quinoa HOM05D006105 ORTHO05D006345 6.1e-21 106.3 431 30.2
TWI38G0440 Tripterygium wilfordii HOM05D006105 ORTHO05D006345 3.9e-20 103.6 421 31.1
TAR629G1657 Trochodendron aralioides HOM05D006105 ORTHO05D006345 1.5e-19 101.7 468 30.1
DCAR_024487 Daucus carota HOM05D006105 ORTHO05D006345 2.0e-19 101.3 333 28.5
Lalb_Chr25g0286021 Lupinus albus HOM05D006105 ORTHO05D006345 3.3e-19 100.5 436 29.1
PGSC0003DMG400044967 Solanum tuberosum HOM05D016660 ORTHO05D006345 4.3e-19 100.1 416 28.1
Lj3g0024128 Lotus japonicus HOM05D006105 ORTHO05D006345 7.4e-19 99.4 418 31.3
TWI39G0145 Tripterygium wilfordii HOM05D006105 ORTHO05D006345 1.1e-17 95.5 406 30.5
PSO541G5705 Papaver somniferum HOM05D006105 ORTHO05D006345 4.1e-17 93.6 409 27.1
Sopen10g003370 Solanum pennellii HOM05D016660 ORTHO05D006345 1.2e-16 92.0 423 26.0
MD11G1258600 Malus domestica HOM05D006105 ORTHO05D006345 2.0e-16 91.3 432 27.5
Gorai.002G064700 Gossypium raimondii HOM05D006105 ORTHO05D006345 5.9e-16 89.7 455 28.8
Atru.chr2.2260 Acer truncatum HOM05D006105 ORTHO05D006345 1.0e-15 89.0 425 29.2
Sabra16G0247400 Salix brachista HOM05D006105 ORTHO05D006345 1.0e-15 89.0 453 27.6
Manes.17G052800 Manihot esculenta HOM05D013066 ORTHO05D010890 1.3e-15 88.6 413 28.3
Ca_04016_v3 Cicer arietinum L. HOM05D006105 ORTHO05D006345 1.7e-15 88.2 473 27.5
Sopen10g003360 Solanum pennellii HOM05D016660 ORTHO05D006345 6.5e-15 86.3 416 26.7
Lsat_1_v5_gn_7_103061 Lactuca sativa HOM05D006105 ORTHO05D006345 1.9e-14 84.7 425 28.0
arahy.Tifrunner.gnm1.ann1.KE6FEG Arachis hypogaea HOM05D006105 ORTHO05D006345 3.2e-14 84.0 413 27.4
Gohir.D01G045100 Gossypium hirsutum HOM05D006105 ORTHO05D006345 7.2e-14 82.8 455 28.4
Medtr2g078220 Medicago truncatula HOM05D006105 ORTHO05D006345 1.2e-13 82.0 440 25.2
Oeu051102.1 Olea europaea HOM05D006105 ORTHO05D006345 1.6e-13 81.6 96 47.9
SalBow7G3373 Salvia bowleyana HOM05D006105 ORTHO05D006345 7.9e-13 79.3 347 29.7
MBI07_g17039_MAGBIO Magnolia biondii HOM05D006105 ORTHO05D006345 1.8e-12 78.2 407 28.0
PSO675G6909 Papaver somniferum HOM05D006105 ORTHO05D006345 1.8e-12 78.2 398 27.9
SalBow7G2198 Salvia bowleyana HOM05D006105 ORTHO05D006345 2.3e-12 77.8 347 29.4
ClCG07G009910 Citrullus lanatus HOM05D006105 ORTHO05D006345 3.9e-12 77.0 418 30.1
MELO3C016090.2 Cucumis melo HOM05D006105 ORTHO05D006345 8.8e-12 75.9 433 30.0
MELO3C025628.2 Cucumis melo HOM05D006105 ORTHO05D006345 1.5e-11 75.1 467 27.4
Psat5g240600 Pisum sativum HOM05D006105 ORTHO05D006345 3.3e-11 73.9 340 28.2
Manes.16G035200 Manihot esculenta HOM05D013066 ORTHO05D006345 4.4e-11 73.6 413 27.6
SalBow8G2605 Salvia bowleyana HOM05D006105 ORTHO05D006345 5.7e-11 73.2 397 27.2
Glyma.06G232600 Glycine max HOM05D006105 ORTHO05D006345 9.7e-11 72.4 417 24.2
Aqoxy1G02199 Aquilegia oxysepala HOM05D006105 ORTHO05D006345 1.7e-10 71.6 454 28.6
Gohir.A01G059000 Gossypium hirsutum HOM05D006105 ORTHO05D006345 2.2e-10 71.2 315 30.8
PGSC0003DMG400021274 Solanum tuberosum HOM05D016660 ORTHO05D006345 2.2e-10 71.2 110 40.9
arahy.Tifrunner.gnm1.ann1.LEI4AX Arachis hypogaea HOM05D006105 ORTHO05D006345 2.8e-10 70.9 426 25.8
ClCG11G017660 Citrullus lanatus HOM05D006105 ORTHO05D006345 3.7e-10 70.5 460 26.3
SGA_v2.0_scaffold73G24208 Striga asiatica HOM05D006105 ORTHO05D006345 4.8e-10 70.1 359 28.7
CsaV3_4G033280 Cucumis sativus L. HOM05D006105 ORTHO05D006345 1.4e-09 68.6 467 26.3
ECA236G3415 Erigeron canadensis HOM05D006105 ORTHO05D006345 1.4e-09 68.6 169 34.9
Dinv17387 Davidia involucrata HOM05D006105 ORTHO05D006345 3.1e-09 67.4 425 26.6
Migut.M00751 Erythranthe guttata HOM05D006105 ORTHO05D006345 3.1e-09 67.4 353 27.2
CsaV3_4G008420 Cucumis sativus L. HOM05D006105 ORTHO05D006345 3.5e-08 63.9 430 27.9
PGSC0003DMG400044091 Solanum tuberosum HOM05D016660 ORTHO05D006345 2.9e-07 60.8 92 41.3
Sed0026435 Sechium edule HOM05D006105 ORTHO05D006345 1.1e-06 58.9 360 28.3
arahy.Tifrunner.gnm1.ann1.TTJ9YL Arachis hypogaea HOM05D006105 ORTHO05D006345 2.5e-06 57.8 431 25.5


User provided reference genes

Program Settings