Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0003067g0070 Nicotiana tabacum HOM05D006812 ORTHO05D000482 1.9e-88 329.3 188 100.0
Nitab4.5_0006450g0030 Nicotiana tabacum HOM05D000679 ORTHO05D000482 2.6e-53 212.6 214 54.2
Nitab4.5_0004809g0030 Nicotiana tabacum HOM05D000679 ORTHO05D000482 2.2e-44 183.0 153 63.4
Nitab4.5_0004728g0110 Nicotiana tabacum HOM05D011269 ORTHO05D000482 3.5e-34 149.1 213 47.4
Nitab4.5_0003644g0020 Nicotiana tabacum HOM05D011269 ORTHO05D000482 3.0e-25 119.4 187 42.8
Nitab4.5_0004984g0010 Nicotiana tabacum HOM05D006812 ORTHO05D000482 8.1e-23 111.3 131 48.9
Nitab4.5_0010116g0020 Nicotiana tabacum HOM05D000679 ORTHO05D000482 2.0e-21 106.7 113 53.1
Nitab4.5_0000320g0140 Nicotiana tabacum HOM05D000679 ORTHO05D000482 6.0e-18 95.1 106 52.8
Nitab4.5_0007528g0010 Nicotiana tabacum HOM05D006812 ORTHO05D000482 5.3e-14 82.0 146 34.2
Nitab4.5_0000586g0100 Nicotiana tabacum HOM05D006812 ORTHO05D000482 2.9e-12 76.3 186 30.1
Nitab4.5_0002002g0120 Nicotiana tabacum HOM05D006812 ORTHO05D000482 4.9e-12 75.5 117 34.2
Nitab4.5_0000422g0090 Nicotiana tabacum HOM05D006812 ORTHO05D000482 1.1e-11 74.3 129 34.1
Nitab4.5_0001464g0110 Nicotiana tabacum HOM05D006812 ORTHO05D000482 4.2e-11 72.4 82 41.5
Nitab4.5_0005135g0050 Nicotiana tabacum HOM05D006812 ORTHO05D000482 7.1e-11 71.6 123 35.8
Nitab4.5_0000699g0150 Nicotiana tabacum HOM05D006812 ORTHO05D000482 2.7e-10 69.7 132 34.1
Nitab4.5_0004238g0050 Nicotiana tabacum HOM05D006812 ORTHO05D000482 3.5e-10 69.3 66 45.5
Nitab4.5_0002160g0110 Nicotiana tabacum HOM05D000713 ORTHO05D000482 4.6e-10 68.9 110 39.1
Nitab4.5_0000437g0080 Nicotiana tabacum HOM05D006812 ORTHO05D000482 6.0e-10 68.6 89 37.1
Nitab4.5_0000742g0140 Nicotiana tabacum HOM05D006812 ORTHO05D000482 6.0e-10 68.6 168 30.4
Nitab4.5_0006980g0050 Nicotiana tabacum HOM05D005063 ORTHO05D000482 6.0e-10 68.6 131 35.1
Nitab4.5_0013676g0020 Nicotiana tabacum HOM05D005063 ORTHO05D000482 6.0e-10 68.6 84 41.7
Nitab4.5_0009150g0040 Nicotiana tabacum HOM05D006812 ORTHO05D000482 1.0e-09 67.8 139 32.4
Nitab4.5_0003111g0010 Nicotiana tabacum HOM05D005063 ORTHO05D000482 2.3e-09 66.6 135 34.8
Nitab4.5_0000073g0470 Nicotiana tabacum HOM05D006812 ORTHO05D000482 3.9e-09 65.9 98 33.7
Nitab4.5_0001863g0140 Nicotiana tabacum HOM05D005063 ORTHO05D000482 3.9e-09 65.9 84 40.5
Nitab4.5_0001927g0040 Nicotiana tabacum HOM05D005063 ORTHO05D000482 3.9e-09 65.9 84 40.5
Solyc01g094420.3 Solanum lycopersicum HOM05D005063 ORTHO05D000482 5.1e-09 65.5 104 41.3
Nitab4.5_0000759g0110 Nicotiana tabacum HOM05D006812 ORTHO05D000482 6.7e-09 65.1 86 38.4
PGSC0003DMG400000031 Solanum tuberosum HOM05D005063 ORTHO05D000482 6.7e-09 65.1 128 34.4
Nitab4.5_0000477g0030 Nicotiana tabacum HOM05D005063 ORTHO05D000482 1.1e-08 64.3 82 40.2
Nitab4.5_0001308g0070 Nicotiana tabacum HOM05D005063 ORTHO05D000482 1.5e-08 63.9 82 40.2
Nitab4.5_0001047g0110 Nicotiana tabacum HOM05D005063 ORTHO05D000482 1.9e-08 63.5 82 40.2
Nitab4.5_0003911g0040 Nicotiana tabacum HOM05D005063 ORTHO05D000482 1.9e-08 63.5 82 40.2
PGSC0003DMG400041208 Solanum tuberosum HOM05D000679 ORTHO05D000482 2.5e-08 63.2 89 36.0
Nitab4.5_0001173g0040 Nicotiana tabacum HOM05D005063 ORTHO05D000482 3.3e-08 62.8 84 40.5
Sopen01g038220 Solanum pennellii HOM05D005063 ORTHO05D000482 3.3e-08 62.8 104 40.4
Nitab4.5_0001480g0080 Nicotiana tabacum HOM05D006812 ORTHO05D000482 5.6e-08 62.0 173 26.0
Nitab4.5_0002206g0020 Nicotiana tabacum HOM05D006812 ORTHO05D000482 5.6e-08 62.0 67 50.7
Nitab4.5_0001317g0140 Nicotiana tabacum HOM05D006812 ORTHO05D000482 7.4e-08 61.6 157 28.0
Nitab4.5_0002279g0010 Nicotiana tabacum HOM05D005063 ORTHO05D000482 9.6e-08 61.2 135 34.1
Nitab4.5_0000912g0090 Nicotiana tabacum HOM05D006812 ORTHO05D000482 1.3e-07 60.8 51 47.1
Nitab4.5_0011961g0030 Nicotiana tabacum HOM05D005063 ORTHO05D000482 2.1e-07 60.1 63 46.0
Nitab4.5_0000576g0030 Nicotiana tabacum HOM05D006812 ORTHO05D000482 3.7e-07 59.3 143 31.5
Nitab4.5_0013154g0010 Nicotiana tabacum HOM05D000679 ORTHO05D000482 3.7e-07 59.3 74 44.6
Nitab4.5_0000617g0070 Nicotiana tabacum HOM05D006812 ORTHO05D000482 4.8e-07 58.9 84 34.5
Nitab4.5_0001708g0040 Nicotiana tabacum HOM05D006812 ORTHO05D000482 4.8e-07 58.9 109 32.1
Nitab4.5_0000721g0150 Nicotiana tabacum HOM05D006812 ORTHO05D000482 8.1e-07 58.2 83 34.9
Nitab4.5_0000924g0020 Nicotiana tabacum HOM05D005063 ORTHO05D000482 8.1e-07 58.2 134 32.8
Nitab4.5_0008388g0030 Nicotiana tabacum HOM05D006812 ORTHO05D000482 8.1e-07 58.2 63 38.1
Nitab4.5_0000228g0060 Nicotiana tabacum HOM05D005063 ORTHO05D000482 1.1e-06 57.8 67 41.8
Nitab4.5_0000514g0210 Nicotiana tabacum HOM05D006812 ORTHO05D000482 1.1e-06 57.8 50 50.0
Nitab4.5_0001725g0090 Nicotiana tabacum HOM05D006812 ORTHO05D000482 1.1e-06 57.8 75 41.3
Nitab4.5_0005705g0060 Nicotiana tabacum HOM05D002262 ORTHO05D000482 1.4e-06 57.4 80 32.5
Nitab4.5_0000036g0380 Nicotiana tabacum HOM05D005063 ORTHO05D000482 1.8e-06 57.0 84 38.1
Nitab4.5_0007360g0050 Nicotiana tabacum HOM05D005063 ORTHO05D000482 1.8e-06 57.0 61 45.9
Solyc10g150130.1 Solanum lycopersicum HOM05D002262 ORTHO05D000482 1.8e-06 57.0 44 54.5
Nitab4.5_0001530g0110 Nicotiana tabacum HOM05D005063 ORTHO05D000482 2.4e-06 56.6 90 35.6
Solyc11g061985.1 Solanum lycopersicum HOM05D002262 ORTHO05D000482 2.4e-06 56.6 39 59.0
Nitab4.5_0000078g0110 Nicotiana tabacum HOM05D006812 ORTHO05D000482 3.1e-06 56.2 124 32.3
CAN.G1344.11 Capsicum annuum HOM05D000679 ORTHO05D000482 4.0e-06 55.8 47 51.1
Nitab4.5_0000359g0020 Nicotiana tabacum HOM05D006812 ORTHO05D000482 4.0e-06 55.8 152 25.7
Nitab4.5_0002315g0040 Nicotiana tabacum HOM05D005877 ORTHO05D000482 5.3e-06 55.5 48 52.1
Nitab4.5_0002951g0070 Nicotiana tabacum HOM05D005063 ORTHO05D000482 5.3e-06 55.5 47 48.9


User provided reference genes

Program Settings