Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0003067g0040 Nicotiana tabacum HOM05D007369 ORTHO05D009369 2.3e-224 781.9 400 100.0
Nitab4.5_0000197g0120 Nicotiana tabacum HOM05D007369 ORTHO05D009369 1.4e-181 639.8 392 85.2
Sopen01g029630 Solanum pennellii HOM05D007369 ORTHO05D009369 1.6e-161 573.2 411 73.7
CAN.G223.8 Capsicum annuum HOM05D007369 ORTHO05D009369 1.7e-158 563.1 409 73.1
Solyc01g067700.3 Solanum lycopersicum HOM05D007369 ORTHO05D009369 9.1e-141 504.2 365 73.2
Peaxi162Scf00386g00219 Petunia axillaris HOM05D007369 ORTHO05D009369 1.2e-127 460.7 343 71.7
Dinv38329 Davidia involucrata HOM05D007369 ORTHO05D009369 1.4e-80 304.3 421 46.1
Hma1.2p1_0078F.1_g040800 Hydrangea macrophylla HOM05D007369 ORTHO05D009369 8.7e-75 285.0 406 44.3
CSS0015973 Camellia sinensis var. sinensis HOM05D007369 ORTHO05D009369 1.9e-69 267.3 423 43.3
TAR636G2558 Trochodendron aralioides HOM05D007369 ORTHO05D009369 2.8e-65 253.4 401 43.4
Rhsim04G0215900 Rhododendron simsii HOM05D007369 ORTHO05D009369 1.4e-64 251.1 431 41.1
QL06p007318 Quercus lobata HOM05D007369 ORTHO05D009369 3.1e-64 250.0 416 40.6
Oeu044796.2 Olea europaea HOM05D007369 ORTHO05D009369 7.6e-63 245.4 408 41.7
Actinidia40222 Actinidia chinensis HOM05D007369 ORTHO05D009369 2.2e-62 243.8 396 42.4
Actinidia23432 Actinidia chinensis HOM05D007369 ORTHO05D009369 1.4e-61 241.1 408 40.2
Cc03_g02400 Coffea canephora HOM05D007369 ORTHO05D009369 1.4e-61 241.1 418 42.8
Cfa015498 Carpinus fangiana HOM05D007369 ORTHO05D009369 4.2e-61 239.6 404 38.9
GSVIVG01017812001 Vitis vinifera HOM05D007369 ORTHO05D009369 9.3e-61 238.4 417 40.5
CiPaw.02G086900 Carya illinoinensis HOM05D007369 ORTHO05D009369 7.4e-58 228.8 407 40.5
Ciclev10005057m.g Citrus clementina HOM05D007369 ORTHO05D009369 8.2e-57 225.3 415 40.0
Nn3g21294 Nelumbo nucifera HOM05D007369 ORTHO05D009369 8.2e-57 225.3 371 39.1
Thecc.04G277200 Theobroma cacao HOM05D007369 ORTHO05D009369 1.1e-56 224.9 411 38.0
Potri.008G195300 Populus trichocarpa HOM05D007369 ORTHO05D009369 1.4e-56 224.6 405 38.3
Gohir.D09G060700 Gossypium hirsutum HOM05D007369 ORTHO05D009369 1.8e-56 224.2 407 39.3
Manes.03G190800 Manihot esculenta HOM05D007369 ORTHO05D009369 9.0e-56 221.9 356 41.0
Duzib052G0382 Durio zibethinus HOM05D007369 ORTHO05D009369 4.5e-55 219.5 411 38.7
Gohir.A09G061800 Gossypium hirsutum HOM05D007369 ORTHO05D009369 1.0e-54 218.4 402 39.1
Prupe.1G142600 Prunus persica HOM05D007369 ORTHO05D009369 2.2e-54 217.2 415 37.3
SalBow2G2600 Salvia bowleyana HOM05D007369 ORTHO05D009369 2.9e-54 216.9 377 40.6
MD13G1174200 Malus domestica HOM05D007369 ORTHO05D009369 3.2e-53 213.4 414 37.7
Gorai.006G075300 Gossypium raimondii HOM05D007369 ORTHO05D009369 9.4e-53 211.8 407 38.3
Manes.15G017400 Manihot esculenta HOM05D007369 ORTHO05D009369 2.6e-50 203.8 417 36.0
Oeu062882.1 Olea europaea HOM05D007369 ORTHO05D009369 2.6e-50 203.8 337 40.4
Aqoxy2G03087 Aquilegia oxysepala HOM05D007369 ORTHO05D009369 5.7e-50 202.6 362 38.4
CANSAT78G0356 Cannabis sativa HOM05D007369 ORTHO05D009369 5.3e-48 196.1 406 36.0
Dinv44429 Davidia involucrata HOM05D007369 ORTHO05D009369 5.3e-48 196.1 343 40.8
ATR0706G035 Amborella trichopoda HOM05D007369 ORTHO05D009369 3.4e-47 193.4 386 38.1
MBI19_g37517_MAGBIO Magnolia biondii HOM05D007369 ORTHO05D009369 6.5e-46 189.1 388 35.8
Nn4g26033 Nelumbo nucifera HOM05D007369 ORTHO05D009369 1.4e-45 188.0 406 35.7
Glyma.13G214800 Glycine max HOM05D007369 ORTHO05D009369 2.5e-45 187.2 417 34.3
VMungo0540G1702 Vigna mungo HOM05D007369 ORTHO05D009369 3.2e-45 186.8 422 33.2
Eucgr.B01264 Eucalyptus grandis HOM05D007369 ORTHO05D009369 4.2e-45 186.4 333 38.4
Sed0026345 Sechium edule HOM05D007369 ORTHO05D009369 5.5e-45 186.0 374 35.3
Haze_01056 Corylus avellana HOM05D007369 ORTHO05D009369 1.2e-44 184.9 460 32.6
Glyma.15G098300 Glycine max HOM05D007369 ORTHO05D009369 1.0e-43 181.8 402 35.1
Phvul.006G161000 Phaseolus vulgaris HOM05D007369 ORTHO05D009369 3.0e-43 180.3 419 33.7
Potri.010G031250 Populus trichocarpa HOM05D007369 ORTHO05D009369 3.9e-43 179.9 216 49.1
TPR.G37368 Trifolium pratense HOM05D007369 ORTHO05D009369 3.9e-43 179.9 415 34.9
Migut.G00214 Erythranthe guttata HOM05D007369 ORTHO05D009369 6.7e-43 179.1 170 54.7
CsaV3_3G014100 Cucumis sativus L. HOM05D007369 ORTHO05D009369 2.6e-42 177.2 292 38.7
DCAR_002440 Daucus carota HOM05D007369 ORTHO05D009369 2.6e-42 177.2 312 39.1
FvH4_4g17160 Fragaria vesca HOM05D007369 ORTHO05D009369 9.7e-42 175.3 398 34.9
FAN12G1425 Fragaria x ananassa HOM05D007369 ORTHO05D009369 9.7e-42 175.3 398 34.9
FAN07G2486 Fragaria x ananassa HOM05D007369 ORTHO05D009369 1.3e-41 174.9 395 34.2
Sabra08G0148500 Salix brachista HOM05D007369 ORTHO05D009369 6.3e-41 172.6 147 59.2
RcHm_v2.0_Chr4g0420931 Rosa chinensis HOM05D007369 ORTHO05D009369 1.1e-40 171.8 405 32.6
FAN12G3176 Fragaria x ananassa HOM05D007369 ORTHO05D009369 1.4e-40 171.4 398 34.7
ClCG05G005770 Citrullus lanatus HOM05D007369 ORTHO05D009369 9.1e-40 168.7 329 35.6
FAN17G0929 Fragaria x ananassa HOM05D007369 ORTHO05D009369 1.6e-39 167.9 396 34.3
COL.COLO4_13933 Corchorus olitorius HOM05D007369 ORTHO05D009369 1.0e-38 165.2 482 31.7
Ca_00577_v3 Cicer arietinum L. HOM05D007369 ORTHO05D009369 8.5e-38 162.2 315 37.1
SGA_v2.0_scaffold57G20253 Striga asiatica HOM05D007369 ORTHO05D009369 8.5e-38 162.2 410 33.2
Duzib151G0340 Durio zibethinus HOM05D007369 ORTHO05D009369 1.9e-37 161.0 412 32.0
Medtr8g093650 Medicago truncatula HOM05D007369 ORTHO05D009369 2.5e-37 160.6 464 29.5
vmacro08206 Vaccinium macrocarpon HOM05D007369 ORTHO05D009369 2.5e-37 160.6 406 34.5
Psat1g187040 Pisum sativum HOM05D007369 ORTHO05D009369 5.5e-37 159.5 469 29.6
Lalb_Chr18g0055751 Lupinus albus HOM05D007369 ORTHO05D009369 9.4e-37 158.7 414 32.4
TWI73G1273 Tripterygium wilfordii HOM05D007369 ORTHO05D009369 1.2e-36 158.3 205 46.8
arahy.Tifrunner.gnm1.ann1.ED76E0 Arachis hypogaea HOM05D007369 ORTHO05D009369 1.6e-36 157.9 392 32.4
HanXRQChr03g0080111 Helianthus annuus HOM05D007369 ORTHO05D009369 1.6e-36 157.9 293 38.6
arahy.Tifrunner.gnm1.ann1.IR05CW Arachis hypogaea HOM05D007369 ORTHO05D009369 2.7e-36 157.1 406 31.5
ECA240G2128 Erigeron canadensis HOM05D007369 ORTHO05D009369 5.7e-34 149.4 375 33.1
Sc13g0003630 Simmondsia chinensis HOM05D007369 ORTHO05D009369 3.1e-32 143.7 282 35.5
MELO3C031713.2 Cucumis melo HOM05D007369 ORTHO05D009369 9.1e-32 142.1 309 36.9
FAN17G3125 Fragaria x ananassa HOM05D007369 ORTHO05D009369 9.1e-32 142.1 127 56.7
Mapoly0126s0031 Marchantia polymorpha HOM05D007369 ORTHO05D009369 2.7e-31 140.6 147 50.3
THA.LOC104820236 Tarenaya hassleriana HOM05D007369 ORTHO05D009369 5.9e-31 139.4 313 31.3
MD16G1175700 Malus domestica HOM05D007369 ORTHO05D009369 7.7e-31 139.0 93 69.9
Atru.chr4.2749 Acer truncatum HOM05D007369 ORTHO05D009369 2.0e-26 124.4 92 62.0
FAN22G0049 Fragaria x ananassa HOM05D007369 ORTHO05D009369 2.0e-26 124.4 397 30.2
Ca_17638_v3 Cicer arietinum L. HOM05D007369 ORTHO05D009369 6.3e-25 119.4 473 26.8
PGSC0003DMG402010654 Solanum tuberosum HOM05D007369 ORTHO05D009369 2.0e-23 114.4 81 67.9
Zm00001eb410560 Zea mays HOM05D007369 ORTHO05D009369 4.7e-20 103.2 317 28.1
LjContig00389g0017607 Lotus japonicus HOM05D007369 ORTHO05D009369 3.4e-18 97.1 344 27.0
TAR365G0645 Trochodendron aralioides HOM05D007369 ORTHO05D009369 2.8e-17 94.0 243 32.9
AagrBONN_evm.TU.Sc2ySwM_362.2687 Anthoceros agrestis HOM05D007369 ORTHO05D009369 4.9e-17 93.2 105 47.6
Lsat_1_v5_gn_5_50560 Lactuca sativa HOM05D007369 ORTHO05D009369 1.2e-15 88.6 103 48.5
Hund24911 Selenicereus undatus HOM05D007369 ORTHO05D009369 5.9e-15 86.3 304 28.3
Atru.chr4.2750 Acer truncatum HOM05D007369 ORTHO05D009369 3.6e-12 77.0 151 35.1
PGSC0003DMG401010654 Solanum tuberosum HOM05D007369 ORTHO05D009369 5.2e-11 73.2 51 74.5
Mapoly0008s0171 Marchantia polymorpha HOM05D007369 ORTHO05D009369 1.1e-08 65.5 220 28.6
CDE02G2863 Ceratophyllum demersum HOM05D007369 ORTHO05D009369 2.3e-06 57.8 90 40.0
Lalb_Chr20g0118171 Lupinus albus HOM05D007369 ORTHO05D009369 3.0e-06 57.4 56 53.6
PGSC0003DMG403010654 Solanum tuberosum HOM05D007369 ORTHO05D051100 3.0e-06 57.4 49 63.3
CBR_g38889 Chara braunii HOM05D007369 ORTHO05D009369 5.0e-06 56.6 50 50.0
Solyc01g067690.4 Solanum lycopersicum HOM05D007369 ORTHO05D051100 6.6e-06 56.2 49 59.2


User provided reference genes

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