Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0003052g0050 Nicotiana tabacum HOM05D003841 ORTHO05D004602 4.1e-207 724.5 386 100.0
Nitab4.5_0000552g0100 Nicotiana tabacum HOM05D003841 ORTHO05D004602 2.8e-155 552.4 326 92.6
Peaxi162Scf01365g00027 Petunia axillaris HOM05D003841 ORTHO05D004602 5.0e-128 461.8 328 78.7
Sopen07g032000 Solanum pennellii HOM05D003841 ORTHO05D004602 5.2e-117 425.2 331 71.6
Solyc07g063870.3 Solanum lycopersicum HOM05D003841 ORTHO05D004602 1.5e-116 423.7 329 71.4
PGSC0003DMG400019273 Solanum tuberosum HOM05D003841 ORTHO05D000515 1.1e-111 407.5 308 74.0
Dinv02831 Davidia involucrata HOM05D003841 ORTHO05D004602 3.5e-81 306.2 338 57.7
Dinv22328 Davidia involucrata HOM05D003841 ORTHO05D004602 6.4e-75 285.4 341 55.1
Cc05_g12980 Coffea canephora HOM05D003841 ORTHO05D004602 3.5e-73 279.6 326 53.4
CSS0048456 Camellia sinensis var. sinensis HOM05D003841 ORTHO05D004602 5.3e-69 265.8 337 51.3
Lj1A861T58 Lonicera japonica HOM05D003841 ORTHO05D004602 1.1e-66 258.1 328 49.4
Oeu005438.1 Olea europaea HOM05D003841 ORTHO05D004602 6.5e-59 232.3 328 48.5
Actinidia35303 Actinidia chinensis HOM05D003841 ORTHO05D004602 8.4e-59 231.9 353 47.3
CAN.G952.3 Capsicum annuum HOM05D003841 ORTHO05D004602 3.0e-56 223.4 189 68.3
RhsimUnG0254800 Rhododendron simsii HOM05D003841 ORTHO05D004602 8.7e-56 221.9 343 47.5
CSS0046033 Camellia sinensis var. sinensis HOM05D003841 ORTHO05D004602 1.5e-55 221.1 298 49.0
Lj8A163G39 Lonicera japonica HOM05D003841 ORTHO05D004602 1.5e-55 221.1 335 45.7
CAN.G1160.11 Capsicum annuum HOM05D003841 ORTHO05D004602 7.4e-55 218.8 219 58.9
Migut.H01878 Erythranthe guttata HOM05D003841 ORTHO05D004602 1.1e-53 214.9 326 47.5
Lsat_1_v5_gn_7_107821 Lactuca sativa HOM05D003841 ORTHO05D004602 1.8e-53 214.2 339 42.5
HanXRQChr11g0332121 Helianthus annuus HOM05D003841 ORTHO05D004602 3.1e-53 213.4 332 43.4
CAN.G64.40 Capsicum annuum HOM05D003841 ORTHO05D004602 1.5e-52 211.1 181 66.3
Oeu052335.1 Olea europaea HOM05D003841 ORTHO05D004602 6.5e-51 205.7 333 42.0
QL08p014515 Quercus lobata HOM05D003841 ORTHO05D004602 1.4e-50 204.5 336 41.1
TAR271G0006 Trochodendron aralioides HOM05D003841 ORTHO05D004602 1.2e-49 201.4 345 42.0
TWI39G0875 Tripterygium wilfordii HOM05D003841 ORTHO05D004602 3.6e-49 199.9 342 44.2
Manes.15G079400 Manihot esculenta HOM05D003841 ORTHO05D004602 6.1e-49 199.1 340 42.1
SGA_v2.0_scaffold9G05000 Striga asiatica HOM05D003841 ORTHO05D004602 6.1e-49 199.1 330 44.5
TAR627G0073 Trochodendron aralioides HOM05D003841 ORTHO05D004602 6.1e-49 199.1 344 41.9
vmacro09595 Vaccinium macrocarpon HOM05D003841 ORTHO05D004602 1.0e-48 198.4 478 36.8
MSTRG.14400 Avicennia marina HOM05D003841 ORTHO05D004602 1.8e-48 197.6 285 45.6
Ciclev10008955m.g Citrus clementina HOM05D003841 ORTHO05D004602 2.3e-48 197.2 337 41.5
TAR271G0005 Trochodendron aralioides HOM05D003841 ORTHO05D004602 2.3e-48 197.2 345 42.6
Rhsim06G0190700 Rhododendron simsii HOM05D003841 ORTHO05D004602 3.9e-48 196.4 331 43.2
Rhsim06G0189000 Rhododendron simsii HOM05D003841 ORTHO05D004602 1.1e-47 194.9 331 43.2
Actinidia10692 Actinidia chinensis HOM05D003841 ORTHO05D004602 2.5e-47 193.7 290 45.9
CiPaw.12G124700 Carya illinoinensis HOM05D003841 ORTHO05D004602 2.5e-47 193.7 329 41.0
MSTRG.6876 Avicennia marina HOM05D003841 ORTHO05D004602 4.3e-47 193.0 332 43.4
Nn1g06911 Nelumbo nucifera HOM05D003841 ORTHO05D004602 7.4e-47 192.2 343 41.1
Cfa020471 Carpinus fangiana HOM05D003841 ORTHO05D004602 1.3e-46 191.4 330 43.0
Ah.06g183230 Amaranthus hybridus HOM05D003841 ORTHO05D004602 6.3e-46 189.1 322 41.6
Ca_18832_v3 Cicer arietinum L. HOM05D003841 ORTHO05D004602 8.2e-46 188.7 336 41.7
Ca_30091_v3 Cicer arietinum L. HOM05D003841 ORTHO05D004602 8.2e-46 188.7 336 41.7
Potri.001G410100 Populus trichocarpa HOM05D003841 ORTHO05D004602 1.1e-45 188.3 339 43.4
CAN.G777.9 Capsicum annuum HOM05D003841 ORTHO05D004602 1.4e-45 188.0 318 45.3
Sabra16G0281100 Salix brachista HOM05D003841 ORTHO05D004602 2.4e-45 187.2 340 45.6
ECA236G3199 Erigeron canadensis HOM05D003841 ORTHO05D004602 3.1e-45 186.8 329 41.6
AUR62029272 Chenopodium quinoa HOM05D003841 ORTHO05D004602 4.1e-45 186.4 326 42.9
Potri.011G130000 Populus trichocarpa HOM05D003841 ORTHO05D004602 6.9e-45 185.7 337 41.8
CANSAT11G1059 Cannabis sativa HOM05D003841 ORTHO05D004602 2.0e-44 184.1 324 41.7
Glyma.06G262900 Glycine max HOM05D003841 ORTHO05D004602 2.0e-44 184.1 335 38.2
EL10Ac4g08014 Beta vulgaris HOM05D003841 ORTHO05D004602 3.4e-44 183.3 327 41.6
SalBow7G4379 Salvia bowleyana HOM05D003841 ORTHO05D004602 3.4e-44 183.3 323 41.8
Medtr4g081550 Medicago truncatula HOM05D003841 ORTHO05D004602 4.5e-44 183.0 327 41.0
Haze_09572 Corylus avellana HOM05D003841 ORTHO05D004602 7.7e-44 182.2 355 38.9
vmacro11787 Vaccinium macrocarpon HOM05D003841 ORTHO05D004602 1.0e-43 181.8 366 40.7
VMungo1127G0850 Vigna mungo HOM05D003841 ORTHO05D004602 1.0e-43 181.8 333 37.5
Phvul.011G146700 Phaseolus vulgaris HOM05D003841 ORTHO05D004602 1.7e-43 181.0 331 39.3
Psat7g160280 Pisum sativum HOM05D003841 ORTHO05D004602 2.2e-43 180.6 335 39.4
TWI38G0390 Tripterygium wilfordii HOM05D003841 ORTHO05D004602 2.2e-43 180.6 346 40.2
Hund23360 Selenicereus undatus HOM05D003841 ORTHO05D004602 3.8e-43 179.9 327 41.6
Duzib213G0276 Durio zibethinus HOM05D003841 ORTHO05D004602 8.5e-43 178.7 328 42.4
arahy.Tifrunner.gnm1.ann1.SIF99T Arachis hypogaea HOM05D003841 ORTHO05D004602 1.9e-42 177.6 331 36.3
TPR.G34029 Trifolium pratense HOM05D003841 ORTHO05D004602 7.2e-42 175.6 335 40.0
AUR62041149 Chenopodium quinoa HOM05D003841 ORTHO05D004602 9.4e-42 175.3 330 40.0
Gohir.A11G281600 Gossypium hirsutum HOM05D003841 ORTHO05D004602 9.4e-42 175.3 335 40.6
GSVIVG01014549001 Vitis vinifera HOM05D003841 ORTHO05D004602 1.2e-41 174.9 233 50.2
Lalb_Chr22g0357311 Lupinus albus HOM05D003841 ORTHO05D004602 1.6e-41 174.5 341 38.4
Gohir.D13G147500 Gossypium hirsutum HOM05D003841 ORTHO05D004602 2.1e-41 174.1 335 41.5
Thecc.07G059100 Theobroma cacao HOM05D003841 ORTHO05D004602 3.6e-41 173.3 341 41.6
Migut.M01831 Erythranthe guttata HOM05D003841 ORTHO05D004602 4.7e-41 172.9 324 40.4
Gorai.013G165300 Gossypium raimondii HOM05D003841 ORTHO05D004602 6.1e-41 172.6 335 40.9
Gohir.A13G142900 Gossypium hirsutum HOM05D003841 ORTHO05D004602 7.9e-41 172.2 327 41.3
arahy.Tifrunner.gnm1.ann1.GYU1HX Arachis hypogaea HOM05D003841 ORTHO05D004602 1.0e-40 171.8 336 37.2
DCAR_022502 Daucus carota HOM05D003841 ORTHO05D004602 1.0e-40 171.8 333 42.3
Gorai.007G317200 Gossypium raimondii HOM05D003841 ORTHO05D004602 1.4e-40 171.4 334 40.7
Duzib170G0031 Durio zibethinus HOM05D003841 ORTHO05D004602 1.8e-40 171.0 332 43.4
FvH4_3g21510 Fragaria vesca HOM05D003841 ORTHO05D004602 2.3e-40 170.6 327 37.3
FAN11G1553 Fragaria x ananassa HOM05D003841 ORTHO05D004602 3.9e-40 169.9 327 37.6
Gohir.D11G294200 Gossypium hirsutum HOM05D003841 ORTHO05D004602 5.1e-40 169.5 334 40.1
Lalb_Chr01g0006261 Lupinus albus HOM05D003841 ORTHO05D004602 6.7e-40 169.1 331 38.4
Actinidia05162 Actinidia chinensis HOM05D003841 ORTHO05D004602 8.8e-40 168.7 355 40.3
COL.COLO4_09535 Corchorus olitorius HOM05D003841 ORTHO05D004602 3.3e-39 166.8 337 38.3
DCAR_010006 Daucus carota HOM05D003841 ORTHO05D004602 3.3e-39 166.8 326 40.5
CAN.G22.51 Capsicum annuum HOM05D000121 ORTHO05D000102 2.2e-38 164.1 118 73.7
Lj3g0010893 Lotus japonicus HOM05D003841 ORTHO05D004602 4.8e-38 162.9 338 39.3
PSO675G5063 Papaver somniferum HOM05D003841 ORTHO05D004602 6.3e-38 162.5 340 37.4
Glyma.12G139800 Glycine max HOM05D003841 ORTHO05D004602 1.4e-37 161.4 348 36.2
Eucgr.F03390 Eucalyptus grandis HOM05D003841 ORTHO05D004602 2.4e-37 160.6 337 38.3
MELO3C018156.2 Cucumis melo HOM05D003841 ORTHO05D004602 2.6e-36 157.1 326 36.8
FAN25G3758 Fragaria x ananassa HOM05D003841 ORTHO05D004602 3.5e-36 156.8 322 37.0
CAN.G183.13 Capsicum annuum HOM05D003841 ORTHO05D004602 4.5e-36 156.4 217 48.8
FAN21G0547 Fragaria x ananassa HOM05D003841 ORTHO05D004602 7.7e-36 155.6 327 36.1
Prupe.4G197300 Prunus persica HOM05D003841 ORTHO05D004602 7.7e-36 155.6 332 37.0
Hund02157 Selenicereus undatus HOM05D003841 ORTHO05D004602 1.0e-35 155.2 326 38.0
PSO541G4862 Papaver somniferum HOM05D003841 ORTHO05D004602 2.9e-35 153.7 342 36.5
MD11G1230100 Malus domestica HOM05D003841 ORTHO05D004602 5.0e-35 152.9 330 35.2
unitig_899.g15555 Utricularia gibba HOM05D003841 ORTHO05D004602 1.9e-34 151.0 321 38.6
FAN16G3040 Fragaria x ananassa HOM05D003841 ORTHO05D004602 2.5e-34 150.6 326 36.2
Sed0013156 Sechium edule HOM05D003841 ORTHO05D004602 7.2e-34 149.1 332 36.4
Sc03g0009430 Simmondsia chinensis HOM05D003841 ORTHO05D004602 9.4e-34 148.7 326 34.4
SGA_v2.0_scaffold70G23570 Striga asiatica HOM05D003841 ORTHO05D004602 9.4e-34 148.7 321 36.1
Glyma.13G284700 Glycine max HOM05D003841 ORTHO05D004602 1.6e-33 147.9 334 37.1
THA.LOC104799894 Tarenaya hassleriana HOM05D003841 ORTHO05D004602 2.7e-33 147.1 332 37.3
Glyma.12G216500 Glycine max HOM05D003841 ORTHO05D004602 8.0e-33 145.6 258 40.3
CsaV3_3G022650 Cucumis sativus L. HOM05D003841 ORTHO05D004602 1.4e-32 144.8 330 34.5
MD03G1215500 Malus domestica HOM05D003841 ORTHO05D004602 5.2e-32 142.9 327 36.7
ClCG05G014990 Citrullus lanatus HOM05D003841 ORTHO05D004602 2.0e-31 141.0 329 34.3
AL8G29910 Arabidopsis lyrata HOM05D003841 ORTHO05D004602 2.8e-30 137.1 333 37.5
Carub.0008s1482 Capsella rubella HOM05D003841 ORTHO05D004602 4.8e-30 136.3 333 38.1
Aa31LG3G10490 Aethionema arabicum HOM05D003841 ORTHO05D004602 6.3e-30 136.0 332 39.2
Sabra11G0117400 Salix brachista HOM05D003841 ORTHO05D004602 1.6e-28 131.3 281 42.3
AT5G54540 Arabidopsis thaliana HOM05D003841 ORTHO05D004602 4.5e-28 129.8 330 37.0
DCAR_008683 Daucus carota HOM05D003841 ORTHO05D004602 4.5e-28 129.8 330 37.0
Aqoxy1G03844 Aquilegia oxysepala HOM05D003841 ORTHO05D004602 7.7e-28 129.0 341 33.7
CARHR267820 Cardamine hirsuta HOM05D003841 ORTHO05D004602 2.9e-27 127.1 327 38.2
Sp6g16510 Schrenkiella parvula HOM05D003841 ORTHO05D004602 5.0e-27 126.3 334 37.4
TAR623G1765 Trochodendron aralioides HOM05D003841 ORTHO05D004602 1.1e-26 125.2 337 34.4
unitig_746.g26819 Utricularia gibba HOM05D003841 ORTHO05D004602 3.2e-26 123.6 279 37.6
MBI18_g38396_MAGBIO Magnolia biondii HOM05D003841 ORTHO05D004602 5.5e-26 122.9 337 36.2
CDE05G3666 Ceratophyllum demersum HOM05D003841 ORTHO05D004602 1.6e-25 121.3 329 32.8
Lj3g0010292 Lotus japonicus HOM05D003841 ORTHO05D004602 1.6e-25 121.3 335 32.8
PSO675G0068 Papaver somniferum HOM05D003841 ORTHO05D004602 3.6e-25 120.2 333 31.8
BcaB08g35813 Brassica carinata HOM05D003841 ORTHO05D004602 1.0e-24 118.6 326 36.2
A02p10210 Brassica napus HOM05D003841 ORTHO05D004602 3.0e-24 117.1 283 36.0
BraA10t43276Z Brassica rapa HOM05D003841 ORTHO05D004602 3.0e-24 117.1 284 38.4
Gohir.D11G294233 Gossypium hirsutum HOM05D003841 ORTHO05D004602 5.2e-24 116.3 285 35.8
Gorai.007G317300 Gossypium raimondii HOM05D003841 ORTHO05D004602 5.2e-24 116.3 285 36.1
PSO541G5517 Papaver somniferum HOM05D003841 ORTHO05D004602 8.8e-24 115.5 232 35.8
CAN.G935.4 Capsicum annuum HOM05D003841 ORTHO05D004602 1.2e-23 115.2 99 67.7
A10p11770 Brassica napus HOM05D003841 ORTHO05D004602 1.5e-23 114.8 284 36.3
C02p16910 Brassica napus HOM05D003841 ORTHO05D004602 2.0e-23 114.4 323 34.4
BraA02t06092Z Brassica rapa HOM05D003841 ORTHO05D004602 2.0e-23 114.4 233 39.9
RcHm_v2.0_Chr5g0036951 Rosa chinensis HOM05D003841 ORTHO05D004602 2.0e-23 114.4 228 37.3
Thhalv10014255m.g Eutrema salsugineum HOM05D003841 ORTHO05D004602 3.3e-23 113.6 335 36.1
CAN.G1207.10 Capsicum annuum HOM05D003841 ORTHO05D004602 7.5e-23 112.5 258 33.7
CDE05G3612 Ceratophyllum demersum HOM05D003841 ORTHO05D004602 9.7e-23 112.1 330 32.1
HPP92_004148 Vanilla planifolia HOM05D003841 ORTHO05D004602 1.7e-22 111.3 327 33.3
Cfa021072 Carpinus fangiana HOM05D003841 ORTHO05D004602 2.8e-22 110.5 123 53.7
Gohir.A11G281650 Gossypium hirsutum HOM05D003841 ORTHO05D004602 2.8e-22 110.5 280 36.8
CAN.G362.43 Capsicum annuum HOM05D003841 ORTHO05D004602 6.3e-22 109.4 214 40.7
arahy.Tifrunner.gnm1.ann1.SKE74K Arachis hypogaea HOM05D003841 ORTHO05D004602 1.8e-21 107.8 341 31.7
BcaC04g20329 Brassica carinata HOM05D003841 ORTHO05D004602 1.8e-21 107.8 284 36.6
ATR0804G047 Amborella trichopoda HOM05D003841 ORTHO05D004602 7.0e-21 105.9 316 31.3
C09p44880 Brassica napus HOM05D003841 ORTHO05D004602 9.1e-21 105.5 284 36.3
arahy.Tifrunner.gnm1.ann1.SRRR95 Arachis hypogaea HOM05D003841 ORTHO05D004602 7.7e-20 102.4 345 31.9
BolC9t57359H Brassica oleracea HOM05D003841 ORTHO05D004602 1.7e-19 101.3 290 34.8
Lsat_1_v5_gn_2_59361 Lactuca sativa HOM05D003841 ORTHO05D004602 1.1e-18 98.6 166 37.3
Cpa.g.sc80.126 Carica papaya HOM05D003841 ORTHO05D004602 3.2e-18 97.1 195 42.1
Oeu052339.1 Olea europaea HOM05D003841 ORTHO05D004602 1.6e-17 94.7 215 35.8
Os08g0179900 Oryza sativa ssp. japonica HOM05D003841 ORTHO05D004602 4.7e-17 93.2 250 32.0
ClCG10G006140 Citrullus lanatus HOM05D003841 ORTHO05D004602 8.0e-17 92.4 257 28.8
Zm00001eb171810 Zea mays HOM05D003841 ORTHO05D004602 1.0e-16 92.0 335 30.1
Sed0013484 Sechium edule HOM05D003841 ORTHO05D004602 2.3e-16 90.9 272 28.7
Ah.04g165190 Amaranthus hybridus HOM05D003841 ORTHO05D004602 3.0e-16 90.5 219 37.9
Zm00001eb413050 Zea mays HOM05D003841 ORTHO05D004602 6.8e-16 89.4 337 29.4
Sed0016497 Sechium edule HOM05D003841 ORTHO05D004602 2.6e-15 87.4 211 34.6
HPP92_005894 Vanilla planifolia HOM05D003841 ORTHO05D004602 4.4e-15 86.7 329 29.5
MELO3C016604.2 Cucumis melo HOM05D003841 ORTHO05D004602 1.7e-14 84.7 347 28.8
BcaB05g22143 Brassica carinata HOM05D003841 ORTHO05D004602 2.2e-14 84.3 317 30.6
PSO339G6399 Papaver somniferum HOM05D003841 ORTHO05D004602 1.4e-13 81.6 348 28.4
Oeu052334.1 Olea europaea HOM05D003841 ORTHO05D004602 1.8e-13 81.3 240 32.1
CsaV3_3G005690 Cucumis sativus L. HOM05D003841 ORTHO05D004602 5.4e-13 79.7 277 28.9
VMungo1027G0001 Vigna mungo HOM05D003841 ORTHO05D004602 1.6e-12 78.2 204 30.4
Sabra16G0276700 Salix brachista HOM05D006433 ORTHO05D005382 3.5e-12 77.0 132 47.0
PSO384G0968 Papaver somniferum HOM05D003841 ORTHO05D004602 1.7e-11 74.7 348 27.6
Oeu052338.1 Olea europaea HOM05D003841 ORTHO05D004602 1.9e-10 71.2 323 28.2
Cpa.g.c47761 Carica papaya HOM05D003841 ORTHO05D004602 2.5e-10 70.9 130 42.3
SEGI_16254 Sequoiadendron giganteum HOM05D002766 ORTHO05D002809 4.2e-10 70.1 315 27.0
Phvul.005G089400 Phaseolus vulgaris HOM05D003841 ORTHO05D004602 5.5e-10 69.7 72 48.6
CAN.G526.7 Capsicum annuum HOM05D009195 ORTHO05D000137 8.0e-09 65.9 51 70.6
PGR031G0981 Punica granatum HOM05D003841 ORTHO05D004602 1.0e-08 65.5 150 36.7
VMungo1080G1564 Vigna mungo HOM05D003841 ORTHO05D004602 1.5e-07 61.6 126 41.3
Zm00001eb249490 Zea mays HOM05D002766 ORTHO05D002809 4.9e-06 56.6 143 29.4
SEGI_39337 Sequoiadendron giganteum HOM05D002766 ORTHO05D002809 8.3e-06 55.8 266 25.2
Zm00001eb186540 Zea mays HOM05D002766 ORTHO05D002809 8.3e-06 55.8 150 30.0


User provided reference genes

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