Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0003051g0030 Nicotiana tabacum HOM05D007928 ORTHO05D009207 1.6e-63 245.7 112 100.0
Nitab4.5_0000036g0450 Nicotiana tabacum HOM05D007928 ORTHO05D009207 3.9e-57 224.6 110 94.5
Sopen02g014470 Solanum pennellii HOM05D007928 ORTHO05D009207 1.9e-43 179.1 108 81.5
Solyc02g063380.1 Solanum lycopersicum HOM05D007928 ORTHO05D009207 4.2e-43 177.9 108 81.5
PGSC0003DMG400010390 Solanum tuberosum HOM05D007928 ORTHO05D009207 1.6e-42 176.0 108 81.5
Peaxi162Scf00943g00053 Petunia axillaris HOM05D007928 ORTHO05D009207 1.7e-39 166.0 116 75.0
Nitab4.5_0007512g0040 Nicotiana tabacum HOM05D007928 ORTHO05D009207 3.2e-35 151.8 113 72.6
Peaxi162Scf00703g00018 Petunia axillaris HOM05D007928 ORTHO05D009207 4.8e-31 137.9 94 71.3
Cc07_g07960 Coffea canephora HOM05D007928 ORTHO05D009207 2.7e-26 122.1 109 55.0
Actinidia16387 Actinidia chinensis HOM05D007928 ORTHO05D009207 3.5e-21 105.1 99 53.5
PGSC0003DMG400030657 Solanum tuberosum HOM05D007928 ORTHO05D009207 4.5e-21 104.8 97 61.9
Oeu054747.1 Olea europaea HOM05D007928 ORTHO05D009207 7.7e-21 104.0 99 54.5
Dinv36974 Davidia involucrata HOM05D007928 ORTHO05D009207 5.5e-19 97.8 93 55.9
Sopen02g036180 Solanum pennellii HOM05D007928 ORTHO05D009207 7.2e-19 97.4 101 55.4
Gohir.A11G208300 Gossypium hirsutum HOM05D007928 ORTHO05D009207 9.4e-19 97.1 97 55.7
Gorai.007G230900 Gossypium raimondii HOM05D007928 ORTHO05D009207 1.2e-18 96.7 89 58.4
SGA_v2.0_scaffold149G36512 Striga asiatica HOM05D007928 ORTHO05D009207 1.6e-18 96.3 104 50.0
Gohir.D11G215100 Gossypium hirsutum HOM05D007928 ORTHO05D009207 2.1e-18 95.9 89 58.4
TAR628G0787 Trochodendron aralioides HOM05D007928 ORTHO05D009207 2.1e-18 95.9 78 60.3
Cfa006837 Carpinus fangiana HOM05D007928 ORTHO05D009207 2.7e-18 95.5 111 50.5
COL.COLO4_11686 Corchorus olitorius HOM05D007928 ORTHO05D009207 3.6e-18 95.1 115 51.3
Migut.H00287 Erythranthe guttata HOM05D007928 ORTHO05D009207 3.6e-18 95.1 94 53.2
Duzib147G1143 Durio zibethinus HOM05D007928 ORTHO05D009207 6.1e-18 94.4 108 50.0
Oeu030822.1 Olea europaea HOM05D007928 ORTHO05D009207 6.1e-18 94.4 104 51.0
Thecc.01G084700 Theobroma cacao HOM05D007928 ORTHO05D009207 6.1e-18 94.4 114 50.9
SalBow3G1764 Salvia bowleyana HOM05D007928 ORTHO05D009207 2.3e-17 92.4 82 54.9
SalBow3G2359 Salvia bowleyana HOM05D007928 ORTHO05D009207 2.3e-17 92.4 82 54.9
Haze_03925 Corylus avellana HOM05D007928 ORTHO05D009207 3.0e-17 92.0 106 50.9
Atru.chr3.1179 Acer truncatum HOM05D007928 ORTHO05D009207 4.4e-16 88.2 105 46.7
Oeu050985.1 Olea europaea HOM05D007928 ORTHO05D009207 4.4e-16 88.2 102 50.0
Rhsim08G0088100 Rhododendron simsii HOM05D007928 ORTHO05D009207 9.7e-16 87.0 89 49.4
Migut.L00450 Erythranthe guttata HOM05D007928 ORTHO05D009207 1.7e-15 86.3 109 46.8
Gorai.007G058100 Gossypium raimondii HOM05D007928 ORTHO05D009207 2.8e-15 85.5 113 48.7
Nn5g29796 Nelumbo nucifera HOM05D007928 ORTHO05D009207 2.8e-15 85.5 91 47.3
Gorai.008G088800 Gossypium raimondii HOM05D007928 ORTHO05D009207 1.1e-14 83.6 92 50.0
CiPaw.08G144700 Carya illinoinensis HOM05D007928 ORTHO05D009207 3.1e-14 82.0 116 44.8
MBI16_g14338_MAGBIO Magnolia biondii HOM05D007928 ORTHO05D009207 7.0e-14 80.9 96 41.7
MBI16_g36545_MAGBIO Magnolia biondii HOM05D007928 ORTHO05D009207 9.1e-14 80.5 96 41.7
Manes.12G121900 Manihot esculenta HOM05D007928 ORTHO05D009207 9.1e-14 80.5 99 48.5
Lsat_1_v5_gn_3_81040 Lactuca sativa HOM05D007928 ORTHO05D009207 1.2e-13 80.1 83 48.2
Cpa.g.sc129.13 Carica papaya HOM05D007928 ORTHO05D009207 1.6e-13 79.7 102 48.0
Gohir.A12G082800 Gossypium hirsutum HOM05D007928 ORTHO05D009207 2.7e-13 79.0 86 50.0
GSVIVG01003863001 Vitis vinifera HOM05D007928 ORTHO05D009207 7.7e-13 77.4 111 40.5
Gohir.A11G049900 Gossypium hirsutum HOM05D007928 ORTHO05D009207 1.3e-12 76.6 94 50.0
CsaV3_6G044800 Cucumis sativus L. HOM05D007928 ORTHO05D009207 1.7e-12 76.3 77 53.2
Lalb_Chr16g0381521 Lupinus albus HOM05D007928 ORTHO05D009207 1.7e-12 76.3 92 50.0
Ah.03g134340 Amaranthus hybridus HOM05D007928 ORTHO05D009207 2.9e-12 75.5 96 44.8
FAN26G1033 Fragaria x ananassa HOM05D007928 ORTHO05D009207 2.9e-12 75.5 115 43.5
Ciclev10026783m.g Citrus clementina HOM05D007928 ORTHO05D009207 5.0e-12 74.7 98 49.0
FvH4_1g19100 Fragaria vesca HOM05D007928 ORTHO05D009207 5.0e-12 74.7 116 43.1
FAN19G2807 Fragaria x ananassa HOM05D007928 ORTHO05D009207 5.0e-12 74.7 116 43.1
RcHm_v2.0_Chr2g0110091 Rosa chinensis HOM05D007928 ORTHO05D009207 5.0e-12 74.7 104 43.3
Lsat_1_v5_gn_4_157020 Lactuca sativa HOM05D007928 ORTHO05D009207 6.5e-12 74.3 98 42.9
MBI16_g07262_MAGBIO Magnolia biondii HOM05D007928 ORTHO05D009207 6.5e-12 74.3 110 42.7
Nn1g05659 Nelumbo nucifera HOM05D007928 ORTHO05D009207 6.5e-12 74.3 85 44.7
Phvul.002G143700 Phaseolus vulgaris HOM05D007928 ORTHO05D009207 1.1e-11 73.6 78 48.7
VMungo1215G2120 Vigna mungo HOM05D007928 ORTHO05D009207 1.1e-11 73.6 78 48.7
Lsat_1_v5_gn_4_157500 Lactuca sativa HOM05D007928 ORTHO05D009207 1.5e-11 73.2 98 42.9
Glyma.01G020400 Glycine max HOM05D007928 ORTHO05D009207 2.5e-11 72.4 73 46.6
Glyma.09G201900 Glycine max HOM05D007928 ORTHO05D009207 3.2e-11 72.0 76 46.1
Prupe.6G209000 Prunus persica HOM05D007928 ORTHO05D009207 1.6e-10 69.7 93 46.2
CDE01G0331 Ceratophyllum demersum HOM05D007928 ORTHO05D009207 2.1e-10 69.3 88 39.8
ClCG01G018220 Citrullus lanatus HOM05D007928 ORTHO05D009207 4.7e-10 68.2 74 47.3
CiPaw.07G043300 Carya illinoinensis HOM05D007928 ORTHO05D009207 6.1e-10 67.8 95 45.3
EL10Ac6g13311 Beta vulgaris HOM05D007928 ORTHO05D009207 8.0e-10 67.4 117 41.9
Lj2g0015328 Lotus japonicus HOM05D007928 ORTHO05D009207 8.0e-10 67.4 105 42.9
Sc03g0000550 Simmondsia chinensis HOM05D007928 ORTHO05D009207 8.0e-10 67.4 99 46.5
MELO3C007699.2 Cucumis melo HOM05D007928 ORTHO05D009207 5.2e-09 64.7 73 47.9
FAN23G2934 Fragaria x ananassa HOM05D007928 ORTHO05D009207 1.5e-08 63.2 92 41.3
Lalb_Chr09g0325821 Lupinus albus HOM05D007928 ORTHO05D009207 1.5e-08 63.2 93 40.9
Medtr5g030990 Medicago truncatula HOM05D007928 ORTHO05D009207 1.5e-08 63.2 73 42.5
arahy.Tifrunner.gnm1.ann1.WFP9WJ Arachis hypogaea HOM05D007928 ORTHO05D009207 1.7e-07 59.7 96 35.4
TPR.G37018 Trifolium pratense HOM05D007928 ORTHO05D009207 2.2e-07 59.3 88 39.8
Thhalv10005166m.g Eutrema salsugineum HOM05D013367 ORTHO05D009207 2.8e-07 58.9 105 39.0
Lsat_1_v5_gn_4_157060 Lactuca sativa HOM05D011897 ORTHO05D009207 4.8e-07 58.2 77 45.5
Lsat_1_v5_gn_4_157100 Lactuca sativa HOM05D011897 ORTHO05D009207 6.3e-07 57.8 77 44.2
Lsat_1_v5_gn_4_157120 Lactuca sativa HOM05D011897 ORTHO05D009207 6.3e-07 57.8 77 45.5
Lsat_1_v5_gn_4_156501 Lactuca sativa HOM05D011897 ORTHO05D009207 8.3e-07 57.4 76 44.7
Lsat_1_v5_gn_4_156481 Lactuca sativa HOM05D011897 ORTHO05D009207 1.1e-06 57.0 76 44.7
Sed0007366 Sechium edule HOM05D007928 ORTHO05D009207 2.4e-06 55.8 88 37.5
Lsat_1_v5_gn_4_157180 Lactuca sativa HOM05D011897 ORTHO05D009207 3.1e-06 55.5 77 41.6
Lsat_1_v5_gn_4_157220 Lactuca sativa HOM05D011897 ORTHO05D009207 3.1e-06 55.5 77 41.6
THA.LOC109116076 Tarenaya hassleriana HOM05D013367 ORTHO05D009207 3.1e-06 55.5 97 39.2
Lsat_1_v5_gn_4_157300 Lactuca sativa HOM05D011897 ORTHO05D009207 5.4e-06 54.7 79 43.0
C03p60140 Brassica napus HOM05D013367 ORTHO05D009207 7.0e-06 54.3 92 37.0
BolC3t18278H Brassica oleracea HOM05D013367 ORTHO05D009207 7.0e-06 54.3 92 37.0


User provided reference genes

Program Settings