Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0003050g0020 Nicotiana tabacum HOM05D005741 ORTHO05D007240 5.9e-291 1003.4 496 100.0
Nitab4.5_0001381g0010 Nicotiana tabacum HOM05D005741 ORTHO05D007240 4.1e-268 927.5 496 91.5
PGSC0003DMG400004829 Solanum tuberosum HOM05D005741 ORTHO05D007240 9.6e-257 889.8 497 87.3
Sopen08g026870 Solanum pennellii HOM05D005741 ORTHO05D007240 1.1e-252 876.3 497 86.1
Solyc08g078380.3 Solanum lycopersicum HOM05D005741 ORTHO05D007240 9.3e-252 873.2 497 85.7
Peaxi162Scf00214g00035 Petunia axillaris HOM05D005741 ORTHO05D007240 1.7e-245 852.4 497 84.5
CAN.G1178.14 Capsicum annuum HOM05D005741 ORTHO05D007240 2.3e-226 788.9 461 83.3
Lj2A224T24 Lonicera japonica HOM05D005741 ORTHO05D007240 1.2e-177 627.1 499 62.1
CSS0012403 Camellia sinensis var. sinensis HOM05D005741 ORTHO05D007240 9.8e-177 624.0 503 62.8
Actinidia02155 Actinidia chinensis HOM05D005741 ORTHO05D007240 2.4e-175 619.4 488 64.1
Migut.A01137 Erythranthe guttata HOM05D005741 ORTHO05D007240 7.0e-175 617.8 480 64.4
Atru.chr9.1271 Acer truncatum HOM05D005741 ORTHO05D007240 7.3e-172 607.8 490 63.3
Thecc.03G247800 Theobroma cacao HOM05D005741 ORTHO05D007240 1.6e-171 606.7 484 64.0
CANSAT21G0669 Cannabis sativa HOM05D005741 ORTHO05D007240 2.0e-169 599.7 489 60.9
Gohir.D09G191200 Gossypium hirsutum HOM05D005741 ORTHO05D007240 2.0e-169 599.7 496 62.3
Haze_07941 Corylus avellana HOM05D005741 ORTHO05D007240 3.4e-169 599.0 484 64.7
Duzib205G0633 Durio zibethinus HOM05D005741 ORTHO05D007240 9.8e-169 597.4 426 68.3
Ciclev10019844m.g Citrus clementina HOM05D005741 ORTHO05D007240 1.3e-168 597.0 487 61.6
Gorai.003G175200 Gossypium raimondii HOM05D005741 ORTHO05D007240 8.3e-168 594.3 494 61.7
Gorai.006G214000 Gossypium raimondii HOM05D005741 ORTHO05D007240 1.1e-167 594.0 496 61.9
Duzib084G1038 Durio zibethinus HOM05D005741 ORTHO05D007240 1.4e-167 593.6 432 68.1
Gohir.A09G196600 Gossypium hirsutum HOM05D005741 ORTHO05D007240 1.4e-167 593.6 495 61.8
Potri.003G079400 Populus trichocarpa HOM05D005741 ORTHO05D007240 2.4e-167 592.8 444 66.7
HanXRQChr16g0501101 Helianthus annuus HOM05D005741 ORTHO05D007240 5.4e-167 591.7 498 59.6
Eucgr.E00405 Eucalyptus grandis HOM05D005741 ORTHO05D007240 7.0e-167 591.3 486 61.3
Sabra03G0049500 Salix brachista HOM05D005741 ORTHO05D007240 1.6e-166 590.1 444 65.8
Prupe.5G065000 Prunus persica HOM05D005741 ORTHO05D007240 2.0e-166 589.7 488 62.3
Manes.01G083800 Manihot esculenta HOM05D005741 ORTHO05D007240 3.5e-166 589.0 500 61.0
Gohir.D03G165500 Gossypium hirsutum HOM05D005741 ORTHO05D007240 6.0e-166 588.2 494 60.7
TWI15G0579 Tripterygium wilfordii HOM05D005741 ORTHO05D007240 2.3e-165 586.3 496 59.5
THA.LOC104806667 Tarenaya hassleriana HOM05D005741 ORTHO05D007240 3.0e-165 585.9 493 61.3
CiPaw.11G082200 Carya illinoinensis HOM05D005741 ORTHO05D007240 3.9e-165 585.5 490 63.9
Cc08_g12130 Coffea canephora HOM05D005741 ORTHO05D007240 3.9e-165 585.5 501 59.9
RcHm_v2.0_Chr7g0204071 Rosa chinensis HOM05D005741 ORTHO05D007240 5.0e-165 585.1 491 63.1
MD04G1060600 Malus domestica HOM05D005741 ORTHO05D007240 7.3e-164 581.3 491 61.5
DCAR_008509 Daucus carota HOM05D005741 ORTHO05D007240 9.5e-164 580.9 475 61.1
QL12p011266 Quercus lobata HOM05D005741 ORTHO05D007240 9.5e-164 580.9 481 62.8
TWI81G0674 Tripterygium wilfordii HOM05D005741 ORTHO05D007240 2.3e-162 576.2 493 58.0
GSVIVG01005817001 Vitis vinifera HOM05D005741 ORTHO05D007240 4.0e-162 575.5 458 62.7
vmacro00008 Vaccinium macrocarpon HOM05D005741 ORTHO05D007240 5.2e-162 575.1 552 56.3
FAN13G2335 Fragaria x ananassa HOM05D005741 ORTHO05D007240 2.0e-161 573.2 498 61.0
Lsat_1_v5_gn_6_59361 Lactuca sativa HOM05D005741 ORTHO05D007240 7.5e-161 571.2 495 58.2
Thhalv10024957m.g Eutrema salsugineum HOM05D005741 ORTHO05D007240 1.3e-160 570.5 494 58.9
FvH4_5g19490 Fragaria vesca HOM05D005741 ORTHO05D007240 3.7e-160 568.9 498 60.8
CARHR224030 Cardamine hirsuta HOM05D005741 ORTHO05D007240 1.4e-159 567.0 492 60.2
SalBow5G2168 Salvia bowleyana HOM05D005741 ORTHO05D007240 3.2e-159 565.8 464 63.6
C01p25020 Brassica napus HOM05D005741 ORTHO05D007240 5.4e-159 565.1 498 59.4
BolC1t02446H Brassica oleracea HOM05D005741 ORTHO05D007240 5.4e-159 565.1 498 59.4
FAN18G1401 Fragaria x ananassa HOM05D005741 ORTHO05D007240 1.6e-158 563.5 498 60.4
SGA_v2.0_scaffold199G41222 Striga asiatica HOM05D005741 ORTHO05D007240 1.6e-158 563.5 517 57.3
FAN18G3259 Fragaria x ananassa HOM05D005741 ORTHO05D007240 4.6e-158 562.0 498 60.2
PSO782G4316 Papaver somniferum HOM05D005741 ORTHO05D007240 6.0e-158 561.6 438 63.5
Sed0015384 Sechium edule HOM05D005741 ORTHO05D007240 1.7e-157 560.1 492 57.9
Medtr8g104850 Medicago truncatula HOM05D005741 ORTHO05D007240 2.3e-157 559.7 480 58.1
PSO063G3551 Papaver somniferum HOM05D005741 ORTHO05D007240 2.3e-157 559.7 490 59.2
BcaNung00094 Brassica carinata HOM05D005741 ORTHO05D007240 3.9e-157 558.9 494 58.5
AL7G37290 Arabidopsis lyrata HOM05D005741 ORTHO05D007240 5.1e-157 558.5 493 60.2
MELO3C005514.2 Cucumis melo HOM05D005741 ORTHO05D007240 5.1e-157 558.5 496 57.7
BcaC09g50473 Brassica carinata HOM05D005741 ORTHO05D007240 6.6e-157 558.1 498 59.2
BraA01t01920Z Brassica rapa HOM05D005741 ORTHO05D007240 8.6e-157 557.8 498 58.4
COL.COLO4_37119 Corchorus olitorius HOM05D005741 ORTHO05D007240 3.3e-156 555.8 405 66.7
A01p19940 Brassica napus HOM05D005741 ORTHO05D007240 5.6e-156 555.1 498 58.6
Ca_17300_v3 Cicer arietinum L. HOM05D005741 ORTHO05D007240 5.6e-156 555.1 478 57.5
Lj2g0010165 Lotus japonicus HOM05D005741 ORTHO05D007240 5.6e-156 555.1 500 56.8
Nn6g33867 Nelumbo nucifera HOM05D005741 ORTHO05D007240 7.3e-156 554.7 496 57.1
AT4G17430 Arabidopsis thaliana HOM05D005741 ORTHO05D007240 9.5e-156 554.3 492 59.6
FAN04G2833 Fragaria x ananassa HOM05D005741 ORTHO05D007240 1.6e-155 553.5 498 59.2
arahy.Tifrunner.gnm1.ann1.915X16 Arachis hypogaea HOM05D005741 ORTHO05D007240 2.8e-155 552.7 422 61.4
arahy.Tifrunner.gnm1.ann1.F09Q1T Arachis hypogaea HOM05D005741 ORTHO05D007240 2.8e-155 552.7 422 61.4
CsaV3_5G004450 Cucumis sativus L. HOM05D005741 ORTHO05D007240 4.7e-155 552.0 437 62.0
EL10Ac1g01729 Beta vulgaris HOM05D005741 ORTHO05D007240 6.2e-155 551.6 486 56.0
Ca_17307_v3 Cicer arietinum L. HOM05D005741 ORTHO05D007240 6.2e-155 551.6 423 61.9
Aqoxy3G02814 Aquilegia oxysepala HOM05D005741 ORTHO05D007240 2.6e-153 546.2 459 59.0
Psat7g009600 Pisum sativum HOM05D005741 ORTHO05D007240 1.3e-152 543.9 490 55.5
FAN08G2842 Fragaria x ananassa HOM05D005741 ORTHO05D007240 1.7e-152 543.5 498 59.2
Lalb_Chr07g0190101 Lupinus albus HOM05D005741 ORTHO05D007240 1.7e-152 543.5 484 56.0
TPR.G32686 Trifolium pratense HOM05D005741 ORTHO05D007240 1.7e-152 543.5 430 59.8
Carub.0007s2399 Capsella rubella HOM05D005741 ORTHO05D007240 3.8e-152 542.3 493 59.0
Rhsim03G0144800 Rhododendron simsii HOM05D005741 ORTHO05D007240 3.2e-151 539.3 513 56.5
Glyma.13G055300 Glycine max HOM05D005741 ORTHO05D007240 5.4e-151 538.5 486 55.3
Phvul.004G038100 Phaseolus vulgaris HOM05D005741 ORTHO05D007240 2.1e-150 536.6 491 55.8
Aa31sc151G50 Aethionema arabicum HOM05D005741 ORTHO05D007240 4.6e-150 535.4 492 56.5
unitig_0.g1051 Utricularia gibba HOM05D005741 ORTHO05D007240 3.0e-149 532.7 486 56.2
VMungo0464G0479 Vigna mungo HOM05D005741 ORTHO05D007240 3.0e-149 532.7 472 55.7
Thhalv10000864m.g Eutrema salsugineum HOM05D005741 ORTHO05D007240 4.3e-148 528.9 492 55.3
Sc22g0001010 Simmondsia chinensis HOM05D005741 ORTHO05D007240 4.7e-147 525.4 422 60.9
TAR629G0196 Trochodendron aralioides HOM05D005741 ORTHO05D007240 2.0e-145 520.0 402 64.4
CDE02G0403 Ceratophyllum demersum HOM05D005741 ORTHO05D007240 4.4e-145 518.8 435 60.5
Os10g0561200 Oryza sativa ssp. japonica HOM05D005741 ORTHO05D007240 1.7e-144 516.9 502 53.8
CDE09G0915 Ceratophyllum demersum HOM05D005741 ORTHO05D007240 6.4e-144 515.0 435 59.5
ClCG01G004250 Citrullus lanatus HOM05D005741 ORTHO05D007240 2.1e-142 510.0 499 54.5
Zm00001eb023170 Zea mays HOM05D005741 ORTHO05D007240 4.6e-142 508.8 498 53.4
SHI07684 Sapria himalayana HOM05D005741 ORTHO05D007240 2.8e-139 499.6 485 54.2
AUR62042169 Chenopodium quinoa HOM05D005741 ORTHO05D007240 4.8e-139 498.8 400 59.8
PGR042G2173 Punica granatum HOM05D005741 ORTHO05D007240 6.2e-139 498.4 487 54.2
ECA233G5769 Erigeron canadensis HOM05D000263 ORTHO05D000213 1.8e-138 496.9 410 59.8
ATR0057G109 Amborella trichopoda HOM05D005741 ORTHO05D007240 9.0e-138 494.6 514 49.2
AUR62022412 Chenopodium quinoa HOM05D005741 ORTHO05D007240 1.2e-137 494.2 400 58.8
SEGI_37405 Sequoiadendron giganteum HOM05D005741 ORTHO05D007240 5.8e-137 491.9 435 55.2
Gohir.A03G006700 Gossypium hirsutum HOM05D005741 ORTHO05D007240 3.2e-135 486.1 374 65.0
Hund30921 Selenicereus undatus HOM05D005741 ORTHO05D007240 2.3e-133 479.9 452 55.1
Hund20780 Selenicereus undatus HOM05D005741 ORTHO05D007240 5.1e-133 478.8 453 55.2
Oeu036348.1 Olea europaea HOM05D005741 ORTHO05D007240 4.3e-132 475.7 345 66.1
CSS0035552 Camellia sinensis var. sinensis HOM05D005741 ORTHO05D007240 7.9e-126 454.9 343 64.7
Hma1.2p1_1136F.1_g260550 Hydrangea macrophylla HOM05D005741 ORTHO05D007240 6.7e-125 451.8 346 63.0
Dinv03497 Davidia involucrata HOM05D005741 ORTHO05D007240 1.1e-124 451.1 348 63.8
TAR365G0013 Trochodendron aralioides HOM05D005741 ORTHO05D007240 8.2e-123 444.9 356 62.4
Cc11_g11020 Coffea canephora HOM05D005741 ORTHO05D007240 6.9e-114 415.2 284 69.7
AagrBONN_evm.TU.Sc2ySwM_228.4051__4052 Anthoceros agrestis HOM05D005741 ORTHO05D007240 3.8e-88 329.7 438 42.0
Dinv39172 Davidia involucrata HOM05D005741 ORTHO05D007240 6.5e-88 328.9 249 65.5
SMO358G0726 Selaginella moellendorffii HOM05D005741 ORTHO05D007240 6.1e-86 322.4 473 40.0
QL05p056282 Quercus lobata HOM05D005741 ORTHO05D007240 2.3e-77 293.9 401 44.1
QL05p056380 Quercus lobata HOM05D005741 ORTHO05D007240 1.3e-72 278.1 214 66.4
Aa31LG6G180 Aethionema arabicum HOM05D005741 ORTHO05D007240 4.2e-71 273.1 230 59.6
MD06G1054000 Malus domestica HOM05D005741 ORTHO05D007240 4.7e-70 269.6 247 60.3
QL05p056241 Quercus lobata HOM05D005741 ORTHO05D007240 1.2e-68 265.0 202 64.9
Lj1g0021170 Lotus japonicus HOM05D005741 ORTHO05D007240 3.7e-67 260.0 415 37.1
Mapoly0027s0023 Marchantia polymorpha HOM05D005741 ORTHO05D007240 9.2e-66 255.4 464 34.9
Sed0012710 Sechium edule HOM05D005741 ORTHO05D007240 6.8e-53 212.6 328 40.5
Glyma.19G032167 Glycine max HOM05D005741 ORTHO05D007240 9.8e-52 208.8 184 56.0
CSS0043083 Camellia sinensis var. sinensis HOM05D005741 ORTHO05D007240 3.5e-49 200.3 167 58.7
Mapoly0048s0017 Marchantia polymorpha HOM05D005741 ORTHO05D007240 1.3e-48 198.4 455 29.9
vmacro00009 Vaccinium macrocarpon HOM05D005741 ORTHO05D007240 5.6e-39 166.4 195 50.3
Pp3c6_17590 Physcomitrium patens HOM05D005741 ORTHO05D007240 3.6e-38 163.7 238 39.5
vmacro00011 Vaccinium macrocarpon HOM05D005741 ORTHO05D007240 2.9e-35 154.1 292 38.7
Glyma.19G032233 Glycine max HOM05D005741 ORTHO05D007240 3.0e-32 144.1 177 44.6
CSS0008948 Camellia sinensis var. sinensis HOM05D005741 ORTHO05D007240 3.3e-31 140.6 110 61.8
Actinidia14404 Actinidia chinensis HOM05D005741 ORTHO05D007240 5.6e-31 139.8 333 30.3
CSS0012087 Camellia sinensis var. sinensis HOM05D005741 ORTHO05D007240 1.4e-29 135.2 112 58.9
CSS0007358 Camellia sinensis var. sinensis HOM05D005741 ORTHO05D007240 1.2e-28 132.1 114 57.9
Oeu057691.1 Olea europaea HOM05D005741 ORTHO05D007240 1.6e-22 111.7 75 72.0
Pp3c6_17579 Physcomitrium patens HOM05D005741 ORTHO05D007240 5.8e-20 103.2 77 61.0
Aa31LG6G170 Aethionema arabicum HOM05D005741 ORTHO05D007240 4.9e-19 100.1 111 45.9
Hma1.2p1_2773F.1_g328260 Hydrangea macrophylla HOM05D005741 ORTHO05D228475 4.8e-14 83.6 82 52.4
AL7G37230 Arabidopsis lyrata HOM05D005741 ORTHO05D007240 1.1e-10 72.4 73 53.4


User provided reference genes

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