Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0003044g0100 Nicotiana tabacum HOM05D007451 ORTHO05D009399 9.5e-105 383.6 211 100.0
Nitab4.5_0003838g0080 Nicotiana tabacum HOM05D007451 ORTHO05D009399 6.0e-83 311.2 211 84.4
CAN.G65.121 Capsicum annuum HOM05D007451 ORTHO05D009399 7.6e-62 241.1 211 65.4
Oeu031273.1 Olea europaea HOM05D007451 ORTHO05D009399 2.3e-58 229.6 210 62.9
Lj1C1189G10 Lonicera japonica HOM05D007451 ORTHO05D009399 1.2e-54 217.2 205 58.5
Rhsim02G0158600 Rhododendron simsii HOM05D007451 ORTHO05D009399 2.8e-48 196.1 229 52.0
GSVIVG01021497001 Vitis vinifera HOM05D007451 ORTHO05D009399 3.7e-48 195.7 209 55.0
Lsat_1_v5_gn_7_28421 Lactuca sativa HOM05D007451 ORTHO05D009399 8.2e-48 194.5 205 55.6
Atru.chr10.1223 Acer truncatum HOM05D005618 ORTHO05D007278 1.4e-47 193.7 198 56.6
HanXRQChr04g0114281 Helianthus annuus HOM05D007451 ORTHO05D009399 1.4e-47 193.7 209 54.5
Potri.004G132600 Populus trichocarpa HOM05D007451 ORTHO05D009399 1.2e-46 190.7 210 55.7
TAR624G0819 Trochodendron aralioides HOM05D007451 ORTHO05D009399 5.8e-46 188.3 210 53.3
Manes.17G070400 Manihot esculenta HOM05D007451 ORTHO05D009399 7.6e-46 188.0 210 53.3
ECA246G3905 Erigeron canadensis HOM05D007451 ORTHO05D009399 2.9e-45 186.0 210 50.5
Hma1.2p1_0286F.1_g114180 Hydrangea macrophylla HOM05D007451 ORTHO05D009399 8.4e-45 184.5 214 52.8
TWI73G0492 Tripterygium wilfordii HOM05D007451 ORTHO05D009399 3.2e-44 182.6 210 51.4
Thecc.06G150100 Theobroma cacao HOM05D007451 ORTHO05D009399 5.5e-44 181.8 209 52.2
Actinidia07699 Actinidia chinensis HOM05D007451 ORTHO05D009399 1.2e-43 180.6 209 52.2
CiPaw.10G091600 Carya illinoinensis HOM05D007451 ORTHO05D009399 6.7e-42 174.9 205 52.2
Peaxi162Scf00443g00210 Petunia axillaris HOM05D007451 ORTHO05D009399 6.7e-42 174.9 122 80.3
Ciclev10018276m.g Citrus clementina HOM05D007451 ORTHO05D009399 1.5e-41 173.7 208 50.5
RcHm_v2.0_Chr5g0014241 Rosa chinensis HOM05D007451 ORTHO05D009399 7.4e-41 171.4 206 49.5
arahy.Tifrunner.gnm1.ann1.ZU2BT9 Arachis hypogaea HOM05D007451 ORTHO05D009399 9.7e-41 171.0 210 49.0
Medtr4g084470 Medicago truncatula HOM05D007451 ORTHO05D009399 3.7e-40 169.1 202 49.5
Psat7g130000 Pisum sativum HOM05D007451 ORTHO05D009399 1.8e-39 166.8 202 50.5
MBI07_g23439_MAGBIO Magnolia biondii HOM05D007451 ORTHO05D009399 2.4e-39 166.4 209 47.4
FAN21G0862 Fragaria x ananassa HOM05D007451 ORTHO05D009399 2.6e-38 162.9 223 47.1
arahy.Tifrunner.gnm1.ann1.Z8IVUX Arachis hypogaea HOM05D007451 ORTHO05D009399 7.7e-38 161.4 231 45.0
CSS0045800 Camellia sinensis var. sinensis HOM05D007451 ORTHO05D009399 1.7e-37 160.2 197 51.3
Sc17g0004890 Simmondsia chinensis HOM05D007451 ORTHO05D009399 4.2e-36 155.6 200 48.5
PSO541G4911 Papaver somniferum HOM05D007451 ORTHO05D009399 2.1e-35 153.3 210 44.8
VMungo0251G0908 Vigna mungo HOM05D007451 ORTHO05D009399 3.6e-35 152.5 209 45.9
PSO675G9053 Papaver somniferum HOM05D007451 ORTHO05D009399 6.1e-35 151.8 211 44.1
CANSAT35G1195 Cannabis sativa HOM05D007451 ORTHO05D009399 2.3e-34 149.8 194 46.4
Cc10_g10170 Coffea canephora HOM05D007451 ORTHO05D009399 5.1e-34 148.7 145 60.7
FAN11G0575 Fragaria x ananassa HOM05D007451 ORTHO05D009399 5.1e-34 148.7 197 46.2
Gohir.D10G042000 Gossypium hirsutum HOM05D007451 ORTHO05D009399 8.8e-34 147.9 209 45.9
Gorai.011G044600 Gossypium raimondii HOM05D007451 ORTHO05D009399 8.8e-34 147.9 209 45.9
Prupe.4G081100 Prunus persica HOM05D007451 ORTHO05D009399 1.1e-33 147.5 202 44.6
MD05G1283500 Malus domestica HOM05D007451 ORTHO05D009399 3.3e-33 146.0 194 45.9
CSS0015635 Camellia sinensis var. sinensis HOM05D007451 ORTHO05D009399 4.3e-33 145.6 213 46.0
Cfa000938 Carpinus fangiana HOM05D007451 ORTHO05D009399 1.7e-32 143.7 198 47.5
Phvul.002G096800 Phaseolus vulgaris HOM05D007451 ORTHO05D009399 1.7e-32 143.7 209 43.5
QL05p057933 Quercus lobata HOM05D007451 ORTHO05D009399 6.3e-32 141.7 219 44.7
Gohir.A10G041200 Gossypium hirsutum HOM05D007451 ORTHO05D009399 2.6e-30 136.3 189 47.1
Sabra04G0085400 Salix brachista HOM05D007451 ORTHO05D009399 2.6e-30 136.3 200 46.5
Aqoxy1G01697 Aquilegia oxysepala HOM05D007451 ORTHO05D009399 4.5e-30 135.6 204 41.7
Eucgr.E03355 Eucalyptus grandis HOM05D007451 ORTHO05D009399 5.9e-30 135.2 149 49.0
Nn4g26566 Nelumbo nucifera HOM05D007451 ORTHO05D009399 5.0e-29 132.1 210 41.9
TPR.G38261 Trifolium pratense HOM05D007451 ORTHO05D009399 5.0e-29 132.1 144 51.4
AL4G30550 Arabidopsis lyrata HOM05D007451 ORTHO05D009399 6.5e-29 131.7 161 46.6
Thhalv10017344m.g Eutrema salsugineum HOM05D007451 ORTHO05D009399 1.9e-28 130.2 160 48.1
Sp4g16840 Schrenkiella parvula HOM05D007451 ORTHO05D009399 1.9e-28 130.2 161 47.8
Lj4g0011610 Lotus japonicus HOM05D007451 ORTHO05D009399 2.5e-28 129.8 161 47.2
BcaC02g11529 Brassica carinata HOM05D007451 ORTHO05D009399 4.2e-28 129.0 160 48.1
Glyma.07G220100 Glycine max HOM05D007451 ORTHO05D009399 5.5e-28 128.6 209 41.6
Dinv32247 Davidia involucrata HOM05D007451 ORTHO05D009399 1.2e-27 127.5 143 53.8
FAN25G1374 Fragaria x ananassa HOM05D005618 ORTHO05D007278 1.6e-27 127.1 179 45.8
FvH4_3g05500 Fragaria vesca HOM05D007451 ORTHO05D009399 2.1e-27 126.7 204 41.2
AT2G34580 Arabidopsis thaliana HOM05D007451 ORTHO05D009399 2.7e-27 126.3 150 48.0
BcaB02g09525 Brassica carinata HOM05D007451 ORTHO05D009399 7.9e-27 124.8 161 45.3
EL10Ac8g19670 Beta vulgaris HOM05D007451 ORTHO05D009399 1.0e-26 124.4 209 43.5
Carub.0004s1625 Capsella rubella HOM05D007451 ORTHO05D009399 1.0e-26 124.4 151 47.0
CARHR128670 Cardamine hirsuta HOM05D007451 ORTHO05D009399 1.8e-26 123.6 161 46.6
EL10Ac8g19669 Beta vulgaris HOM05D007451 ORTHO05D009399 2.3e-26 123.2 200 42.0
Eucgr.B02066 Eucalyptus grandis HOM05D007451 ORTHO05D009399 6.7e-26 121.7 152 46.7
Lalb_Chr16g0385141 Lupinus albus HOM05D007451 ORTHO05D009399 9.7e-25 117.9 205 40.5
Glyma.20G018400 Glycine max HOM05D007451 ORTHO05D009399 6.3e-24 115.2 144 47.2
vmacro10960 Vaccinium macrocarpon HOM05D007451 ORTHO05D009399 6.3e-24 115.2 168 43.5
Gorai.008G053800 Gossypium raimondii HOM05D007451 ORTHO05D009399 1.8e-23 113.6 196 41.3
BraA05t20052Z Brassica rapa HOM05D007451 ORTHO05D009399 3.1e-23 112.8 189 39.2
THA.LOC104814695 Tarenaya hassleriana HOM05D007451 ORTHO05D009399 5.0e-21 105.5 184 39.7
Eucgr.I02284 Eucalyptus grandis HOM05D007451 ORTHO05D009399 1.5e-20 104.0 170 39.4
DCAR_003911 Daucus carota HOM05D007451 ORTHO05D009399 2.5e-20 103.2 107 55.1
BolC4t23021H Brassica oleracea HOM05D005261 ORTHO05D006180 9.4e-20 101.3 135 45.9
A05p11060 Brassica napus HOM05D005261 ORTHO05D006180 2.1e-19 100.1 135 43.7
AUR62002741 Chenopodium quinoa HOM05D007451 ORTHO05D009399 2.7e-19 99.8 205 38.0
AUR62002733 Chenopodium quinoa HOM05D007451 ORTHO05D009399 8.0e-19 98.2 205 38.0
AUR62030193 Chenopodium quinoa HOM05D007451 ORTHO05D009399 2.3e-18 96.7 204 38.2
Haze_05609 Corylus avellana HOM05D007451 ORTHO05D009399 1.5e-17 94.0 111 49.5
Gohir.D12G050550 Gossypium hirsutum HOM05D007451 ORTHO05D009399 2.2e-16 90.1 141 43.3
Eucgr.J01485 Eucalyptus grandis HOM05D007451 ORTHO05D009399 6.3e-16 88.6 104 47.1
BolC4t27857H Brassica oleracea HOM05D007451 ORTHO05D009399 1.4e-15 87.4 99 49.5
Gorai.004G185100 Gossypium raimondii HOM05D007451 ORTHO05D009399 1.4e-15 87.4 141 44.0
Eucgr.H02213 Eucalyptus grandis HOM05D007451 ORTHO05D009399 1.3e-13 80.9 89 52.8
Gohir.D12G174800 Gossypium hirsutum HOM05D007451 ORTHO05D009399 1.7e-13 80.5 130 43.1
Duzib192G0695 Durio zibethinus HOM05D007451 ORTHO05D009399 8.5e-13 78.2 144 38.2
Eucgr.C02335 Eucalyptus grandis HOM05D007451 ORTHO05D009399 1.1e-12 77.8 84 47.6
Zm00001eb204550 Zea mays HOM05D007451 ORTHO05D009399 1.5e-12 77.4 205 32.2
CDE02G3067 Ceratophyllum demersum HOM05D007451 ORTHO05D009399 2.5e-12 76.6 122 36.9
arahy.Tifrunner.gnm1.ann1.WBAN0Y Arachis hypogaea HOM05D007451 ORTHO05D009399 3.2e-12 76.3 119 44.5
C04p14410 Brassica napus HOM05D007451 ORTHO05D009399 6.8e-10 68.6 131 35.1
vmacro10959 Vaccinium macrocarpon HOM05D007451 ORTHO05D009399 4.8e-08 62.4 74 47.3
MBI06_g46402_MAGBIO Magnolia biondii HOM05D000482 ORTHO05D000349 7.0e-07 58.5 93 40.9
Hund21366 Selenicereus undatus HOM05D007451 ORTHO05D009399 9.1e-07 58.2 210 28.1
Ah.16g109120 Amaranthus hybridus HOM05D007451 ORTHO05D009399 4.5e-06 55.8 114 37.7


User provided reference genes

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