Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0003039g0010 Nicotiana tabacum HOM05D005658 ORTHO05D006989 4.8e-85 317.8 158 100.0
Nitab4.5_0001968g0140 Nicotiana tabacum HOM05D005658 ORTHO05D006989 1.7e-74 282.7 195 77.4
Nitab4.5_0004205g0010 Nicotiana tabacum HOM05D005658 ORTHO05D006989 3.8e-58 228.4 198 64.1
Nitab4.5_0001315g0030 Nicotiana tabacum HOM05D005658 ORTHO05D006989 3.2e-57 225.3 198 63.6
Solyc03g120540.3 Solanum lycopersicum HOM05D005658 ORTHO05D006989 1.2e-56 223.4 198 62.6
CAN.G438.34 Capsicum annuum HOM05D005658 ORTHO05D006989 3.6e-56 221.9 198 61.1
PGSC0003DMG400002629 Solanum tuberosum HOM05D005658 ORTHO05D006989 3.6e-56 221.9 198 61.6
Migut.D01014 Erythranthe guttata HOM05D005658 ORTHO05D006989 1.8e-55 219.5 190 62.6
SalBow7G0412 Salvia bowleyana HOM05D005658 ORTHO05D006989 4.0e-55 218.4 190 63.7
Migut.D01013 Erythranthe guttata HOM05D005658 ORTHO05D006989 2.0e-54 216.1 139 77.7
SGA_v2.0_scaffold68G22977 Striga asiatica HOM05D005658 ORTHO05D006989 1.3e-53 213.4 188 62.8
Cc04_g02920 Coffea canephora HOM05D005658 ORTHO05D006989 2.2e-53 212.6 195 61.0
TAR383G0711 Trochodendron aralioides HOM05D005658 ORTHO05D006989 2.2e-53 212.6 192 59.4
MSTRG.9467 Avicennia marina HOM05D005658 ORTHO05D006989 2.4e-52 209.1 189 60.8
Dinv38010 Davidia involucrata HOM05D005658 ORTHO05D006989 5.3e-52 208.0 145 71.7
MBI04_g04855_MAGBIO Magnolia biondii HOM05D005658 ORTHO05D006989 7.0e-52 207.6 141 74.5
Manes.04G130900 Manihot esculenta HOM05D005658 ORTHO05D006989 2.0e-51 206.1 191 59.7
Actinidia08995 Actinidia chinensis HOM05D005658 ORTHO05D006989 3.5e-51 205.3 192 58.9
Lj5g0010105 Lotus japonicus HOM05D005658 ORTHO05D006989 4.5e-51 204.9 189 60.8
Duzib235G1329 Durio zibethinus HOM05D005658 ORTHO05D006989 1.0e-50 203.8 191 58.6
ECA234G0336 Erigeron canadensis HOM05D005658 ORTHO05D006989 1.0e-50 203.8 140 75.0
Glyma.08G203800 Glycine max HOM05D005658 ORTHO05D006989 1.3e-50 203.4 145 73.8
HanXRQChr10g0313501 Helianthus annuus HOM05D005658 ORTHO05D006989 1.3e-50 203.4 141 74.5
RcHm_v2.0_Chr2g0139241 Rosa chinensis HOM05D005658 ORTHO05D006989 1.3e-50 203.4 186 59.1
Lj5g0006747 Lotus japonicus HOM05D005658 ORTHO05D006989 1.7e-50 203.0 186 61.3
Lalb_Chr04g0262841 Lupinus albus HOM05D005658 ORTHO05D006989 1.7e-50 203.0 140 75.7
GSVIVG01017054001 Vitis vinifera HOM05D005658 ORTHO05D006989 1.7e-50 203.0 140 73.6
Potri.003G051700 Populus trichocarpa HOM05D005658 ORTHO05D006989 2.2e-50 202.6 191 59.7
AL3G28880 Arabidopsis lyrata HOM05D005658 ORTHO05D006989 2.9e-50 202.2 192 56.8
arahy.Tifrunner.gnm1.ann1.5XEL3K Arachis hypogaea HOM05D005658 ORTHO05D006989 2.9e-50 202.2 142 73.2
CARHR091380 Cardamine hirsuta HOM05D005658 ORTHO05D006989 2.9e-50 202.2 192 57.8
Thhalv10021560m.g Eutrema salsugineum HOM05D005658 ORTHO05D006989 2.9e-50 202.2 190 57.9
arahy.Tifrunner.gnm1.ann1.17ZCGM Arachis hypogaea HOM05D005658 ORTHO05D006989 3.8e-50 201.8 139 74.8
GSVIVG01017053001 Vitis vinifera HOM05D005658 ORTHO05D006989 3.8e-50 201.8 145 71.0
CiPaw.01G234800 Carya illinoinensis HOM05D005658 ORTHO05D006989 5.0e-50 201.4 192 58.9
SalBow7G1899 Salvia bowleyana HOM05D005658 ORTHO05D006989 5.0e-50 201.4 191 59.2
Psat7g255080 Pisum sativum HOM05D005658 ORTHO05D006989 6.5e-50 201.1 140 73.6
TPR.G38603 Trifolium pratense HOM05D005658 ORTHO05D006989 6.5e-50 201.1 145 71.0
arahy.Tifrunner.gnm1.ann1.JS39C6 Arachis hypogaea HOM05D005658 ORTHO05D006989 8.5e-50 200.7 142 72.5
Prupe.3G064800 Prunus persica HOM05D005658 ORTHO05D006989 8.5e-50 200.7 191 58.6
Nn3g18122 Nelumbo nucifera HOM05D005658 ORTHO05D006989 1.1e-49 200.3 191 58.6
VMungo0331G0597 Vigna mungo HOM05D005658 ORTHO05D006989 1.1e-49 200.3 190 57.9
AT3G16190 Arabidopsis thaliana HOM05D005658 ORTHO05D006989 1.5e-49 199.9 190 57.4
Phvul.010G147800 Phaseolus vulgaris HOM05D005658 ORTHO05D006989 1.5e-49 199.9 190 57.9
Phvul.010G147700 Phaseolus vulgaris HOM05D005658 ORTHO05D006989 1.9e-49 199.5 144 71.5
PGR102G0856 Punica granatum HOM05D005658 ORTHO05D006989 1.9e-49 199.5 192 58.3
CSS0031663 Camellia sinensis var. sinensis HOM05D005658 ORTHO05D006989 2.5e-49 199.1 145 71.0
Glyma.07G018600 Glycine max HOM05D005658 ORTHO05D006989 2.5e-49 199.1 144 71.5
Gohir.A02G119700 Gossypium hirsutum HOM05D005658 ORTHO05D006989 3.2e-49 198.7 191 58.1
Haze_16346 Corylus avellana HOM05D005658 ORTHO05D006989 4.2e-49 198.4 140 71.4
Psat5g078360 Pisum sativum HOM05D005658 ORTHO05D006989 4.2e-49 198.4 145 70.3
RcHm_v2.0_Chr2g0139251 Rosa chinensis HOM05D005658 ORTHO05D006989 4.2e-49 198.4 190 56.8
Sp3g14560 Schrenkiella parvula HOM05D005658 ORTHO05D006989 4.2e-49 198.4 190 57.4
MD09G1208600 Malus domestica HOM05D005658 ORTHO05D006989 5.5e-49 198.0 190 58.4
Peaxi162Scf00015g00132 Petunia axillaris HOM05D005658 ORTHO05D006989 7.2e-49 197.6 170 64.1
VMungo0331G1814 Vigna mungo HOM05D005658 ORTHO05D006989 7.2e-49 197.6 142 71.8
DCAR_016205 Daucus carota HOM05D005658 ORTHO05D006989 9.4e-49 197.2 187 58.8
FAN14G0081 Fragaria x ananassa HOM05D005658 ORTHO05D006989 9.4e-49 197.2 188 56.9
Thecc.06G094500 Theobroma cacao HOM05D005658 ORTHO05D006989 9.4e-49 197.2 191 56.5
TPR.G40810 Trifolium pratense HOM05D005658 ORTHO05D006989 9.4e-49 197.2 140 72.9
unitig_746.g26661 Utricularia gibba HOM05D005658 ORTHO05D006989 9.4e-49 197.2 140 69.3
A05p33310 Brassica napus HOM05D005658 ORTHO05D006989 2.1e-48 196.1 191 56.0
FAN02G2498 Fragaria x ananassa HOM05D005658 ORTHO05D006989 2.1e-48 196.1 188 56.4
CANSAT56G4082 Cannabis sativa HOM05D005658 ORTHO05D006989 4.7e-48 194.9 190 57.9
Psat7g255000 Pisum sativum HOM05D005658 ORTHO05D006989 4.7e-48 194.9 144 70.1
BraA05t22156Z Brassica rapa HOM05D005658 ORTHO05D006989 6.1e-48 194.5 147 66.7
PSO210G3060 Papaver somniferum HOM05D005658 ORTHO05D006989 6.1e-48 194.5 188 56.9
C05p50310 Brassica napus HOM05D005658 ORTHO05D006989 8.0e-48 194.1 191 55.0
CANSAT56G2118 Cannabis sativa HOM05D005658 ORTHO05D006989 8.0e-48 194.1 190 57.9
Sopen03g039400 Solanum pennellii HOM05D005658 ORTHO05D006989 8.0e-48 194.1 185 60.0
BcaC09g48588 Brassica carinata HOM05D005658 ORTHO05D006989 1.4e-47 193.4 190 55.3
BolC5t33780H Brassica oleracea HOM05D004680 ORTHO05D005939 1.8e-47 193.0 151 64.9
FvH4_6g31890 Fragaria vesca HOM05D005658 ORTHO05D006989 1.8e-47 193.0 142 67.6
Eucgr.J02954 Eucalyptus grandis HOM05D005658 ORTHO05D006989 2.3e-47 192.6 191 57.6
Gohir.D03G062533 Gossypium hirsutum HOM05D005658 ORTHO05D006989 2.3e-47 192.6 191 57.1
ATR0736G109 Amborella trichopoda HOM05D005658 ORTHO05D006989 5.2e-47 191.4 190 55.3
Carub.0003s1594 Capsella rubella HOM05D005658 ORTHO05D006989 5.2e-47 191.4 147 66.0
FAN05G4480 Fragaria x ananassa HOM05D005658 ORTHO05D006989 6.8e-47 191.0 142 66.9
PSO210G2136 Papaver somniferum HOM05D005658 ORTHO05D006989 1.2e-46 190.3 145 66.2
Cfa002103 Carpinus fangiana HOM05D005658 ORTHO05D006989 2.0e-46 189.5 139 69.1
Gorai.003G064300 Gossypium raimondii HOM05D005658 ORTHO05D006989 2.0e-46 189.5 145 67.6
THA.LOC104817977 Tarenaya hassleriana HOM05D005658 ORTHO05D006989 5.7e-46 188.0 190 54.2
Aa31LG8G3340 Aethionema arabicum HOM05D004680 ORTHO05D005939 9.8e-46 187.2 139 68.3
PSO421G0294 Papaver somniferum HOM05D005658 ORTHO05D006989 9.8e-46 187.2 145 66.9
Aqoxy7G01547 Aquilegia oxysepala HOM05D005658 ORTHO05D006989 2.8e-45 185.7 191 56.0
Ciclev10026541m.g Citrus clementina HOM05D005658 ORTHO05D006989 3.1e-44 182.2 145 64.1
Os02g0276200 Oryza sativa ssp. japonica HOM05D005658 ORTHO05D006989 5.4e-44 181.4 136 69.1
EL10Ac9g22053 Beta vulgaris HOM05D005658 ORTHO05D006989 7.0e-44 181.0 190 54.7
CDE08G1506 Ceratophyllum demersum HOM05D005658 ORTHO05D006989 1.6e-43 179.9 188 54.8
COL.COLO4_30455 Corchorus olitorius HOM05D005658 ORTHO05D006989 1.6e-43 179.9 192 53.6
PSO063G2380 Papaver somniferum HOM05D005658 ORTHO05D006989 1.6e-43 179.9 145 63.4
Peaxi162Scf00015g00131 Petunia axillaris HOM05D005658 ORTHO05D006989 5.9e-43 177.9 159 61.6
Sc12g0009500 Simmondsia chinensis HOM05D005658 ORTHO05D006989 7.7e-43 177.6 140 66.4
SEGI_12338 Sequoiadendron giganteum HOM05D005658 ORTHO05D006989 1.7e-42 176.4 187 52.9
Oeu029646.1 Olea europaea HOM05D005658 ORTHO05D006989 5.0e-42 174.9 169 58.6
Lj9A509T93 Lonicera japonica HOM05D005658 ORTHO05D006989 6.5e-42 174.5 168 60.1
Atru.chr1.3413 Acer truncatum HOM05D005658 ORTHO05D006989 2.5e-41 172.6 109 78.0
HPP92_003927 Vanilla planifolia HOM05D005658 ORTHO05D006989 5.5e-41 171.4 194 52.1
Sed0000814 Sechium edule HOM05D005658 ORTHO05D006989 7.2e-41 171.0 156 59.0
QL05p021437 Quercus lobata HOM05D005658 ORTHO05D006989 6.1e-40 167.9 168 58.9
vmacro16973 Vaccinium macrocarpon HOM05D005658 ORTHO05D006989 1.0e-39 167.2 179 54.7
Os02g0276400 Oryza sativa ssp. japonica HOM05D005658 ORTHO05D006989 1.4e-39 166.8 136 66.2
Sabra03G0027300 Salix brachista HOM05D005658 ORTHO05D006989 1.8e-39 166.4 168 58.3
ClCG09G001890 Citrullus lanatus HOM05D005658 ORTHO05D006989 2.3e-39 166.0 191 50.8
SGA_v2.0_scaffold4G02011 Striga asiatica HOM05D005658 ORTHO05D006989 3.0e-39 165.6 171 56.1
Haze_16345 Corylus avellana HOM05D003600 ORTHO05D004129 5.2e-39 164.9 121 72.7
Ca_20421_v3 Cicer arietinum L. HOM05D005658 ORTHO05D006989 6.8e-39 164.5 123 69.9
Sed0023183 Sechium edule HOM05D005658 ORTHO05D006989 6.8e-39 164.5 137 62.0
CsaV3_7G033450 Cucumis sativus L. HOM05D005658 ORTHO05D006989 1.2e-38 163.7 188 50.5
Lsat_1_v5_gn_5_131001 Lactuca sativa HOM05D000012 ORTHO05D000804 1.5e-38 163.3 120 70.8
Medtr4g011330 Medicago truncatula HOM05D005658 ORTHO05D006989 2.6e-38 162.5 123 68.3
Ciclev10026617m.g Citrus clementina HOM05D005658 ORTHO05D006989 3.4e-38 162.2 137 59.9
Rhsim12G0201100 Rhododendron simsii HOM05D005658 ORTHO05D006989 5.7e-38 161.4 172 54.7
COL.COLO4_18473 Corchorus olitorius HOM05D005658 ORTHO05D006989 3.7e-37 158.7 190 50.0
Gohir.D03G066800 Gossypium hirsutum HOM05D005658 ORTHO05D006989 1.1e-36 157.1 168 54.8
AUR62011684 Chenopodium quinoa HOM05D005658 ORTHO05D006989 7.7e-35 151.0 129 62.0
COL.COLO4_30457 Corchorus olitorius HOM05D005658 ORTHO05D006989 1.0e-34 150.6 166 54.2
MELO3C027085.2 Cucumis melo HOM05D005658 ORTHO05D006989 1.1e-33 147.1 191 47.6
Psat5g078240 Pisum sativum HOM05D005658 ORTHO05D006989 1.9e-33 146.4 112 66.1
SMO147G0229 Selaginella moellendorffii HOM05D005658 ORTHO05D006989 5.6e-33 144.8 138 56.5
Pp3c13_4590 Physcomitrium patens HOM05D005658 ORTHO05D006989 7.3e-33 144.4 196 42.9
Ah.01g021740 Amaranthus hybridus HOM05D005658 ORTHO05D006989 1.6e-32 143.3 166 51.8
AUR62011683 Chenopodium quinoa HOM05D005658 ORTHO05D006989 3.6e-32 142.1 167 49.7
AUR62016508 Chenopodium quinoa HOM05D005658 ORTHO05D006989 3.6e-32 142.1 126 60.3
CBR_g48432 Chara braunii HOM05D005658 ORTHO05D006989 4.7e-32 141.7 150 50.0
Mapoly0052s0007 Marchantia polymorpha HOM05D005658 ORTHO05D006989 6.1e-32 141.4 137 53.3
AUR62016509 Chenopodium quinoa HOM05D005658 ORTHO05D006989 2.0e-30 136.3 115 62.6
AagrBONN_evm.TU.Sc2ySwM_369.407 Anthoceros agrestis HOM05D002948 ORTHO05D003577 1.4e-28 130.2 187 41.2
Cre16.g674650 Chlamydomonas reinhardtii HOM05D005658 ORTHO05D006989 5.8e-22 108.2 137 44.5
CAN.G214.3 Capsicum annuum HOM05D005658 ORTHO05D006989 2.9e-21 105.9 119 53.8
Sed0018991 Sechium edule HOM05D005658 ORTHO05D006989 3.0e-18 95.9 80 65.0
Cpa.g.sc1241.2 Carica papaya HOM05D005658 ORTHO05D006989 6.6e-18 94.7 131 46.6
Manes.11G037100 Manihot esculenta HOM05D005658 ORTHO05D006989 3.4e-14 82.4 121 46.3
Glyma.08G203700 Glycine max HOM05D005658 ORTHO05D006989 8.3e-13 77.8 70 62.9
QL02p037511 Quercus lobata HOM05D005658 ORTHO05D006989 3.6e-08 62.4 52 67.3


User provided reference genes

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