Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0003038g0110 Nicotiana tabacum HOM05D000056 ORTHO05D000019 1.4e-153 546.2 262 100.0
Nitab4.5_0005331g0010 Nicotiana tabacum HOM05D000056 ORTHO05D000019 3.5e-101 372.1 281 69.4
Nitab4.5_0001379g0080 Nicotiana tabacum HOM05D000056 ORTHO05D000019 5.7e-99 364.8 345 60.3
Nitab4.5_0022782g0010 Nicotiana tabacum HOM05D000056 ORTHO05D000019 6.5e-95 351.3 273 70.3
Nitab4.5_0002893g0050 Nicotiana tabacum HOM05D000056 ORTHO05D000019 8.8e-68 261.2 224 65.2
Nitab4.5_0005997g0060 Nicotiana tabacum HOM05D000056 ORTHO05D000019 1.0e-60 237.7 217 62.7
Nitab4.5_0011163g0010 Nicotiana tabacum HOM05D000056 ORTHO05D000019 3.7e-58 229.2 329 43.5
Nitab4.5_0009598g0020 Nicotiana tabacum HOM05D000056 ORTHO05D000019 2.9e-55 219.5 326 44.5
Nitab4.5_0000129g0180 Nicotiana tabacum HOM05D000056 ORTHO05D000019 3.3e-54 216.1 325 43.4
Nitab4.5_0001983g0050 Nicotiana tabacum HOM05D000056 ORTHO05D000019 5.5e-54 215.3 328 44.2
Nitab4.5_0003038g0090 Nicotiana tabacum HOM05D000056 ORTHO05D000019 2.8e-53 213.0 324 42.9
Nitab4.5_0008730g0010 Nicotiana tabacum HOM05D000056 ORTHO05D000019 1.4e-52 210.7 300 44.7
Nitab4.5_0006419g0020 Nicotiana tabacum HOM05D000056 ORTHO05D000019 4.0e-52 209.1 322 41.9
Nitab4.5_0001379g0010 Nicotiana tabacum HOM05D000056 ORTHO05D000019 5.7e-51 205.3 323 41.5
Nitab4.5_0001950g0050 Nicotiana tabacum HOM05D000056 ORTHO05D000019 2.0e-48 196.8 165 64.8
Nitab4.5_0001052g0030 Nicotiana tabacum HOM05D000056 ORTHO05D000019 4.5e-48 195.7 225 52.0
Nitab4.5_0000585g0060 Nicotiana tabacum HOM05D000056 ORTHO05D000019 5.6e-46 188.7 327 41.3
Nitab4.5_0009903g0010 Nicotiana tabacum HOM05D000056 ORTHO05D000019 1.6e-45 187.2 322 37.0
Nitab4.5_0002113g0200 Nicotiana tabacum HOM05D000056 ORTHO05D000019 3.1e-44 183.0 266 42.5
Peaxi162Scf00681g00049 Petunia axillaris HOM05D000056 ORTHO05D000019 1.2e-43 181.0 297 39.7
Nitab4.5_0001379g0090 Nicotiana tabacum HOM05D000056 ORTHO05D000019 9.8e-43 177.9 134 71.6
Nitab4.5_0000129g0450 Nicotiana tabacum HOM05D000056 ORTHO05D000019 1.6e-40 170.6 329 36.2
Nitab4.5_0004179g0020 Nicotiana tabacum HOM05D000056 ORTHO05D000019 3.5e-40 169.5 323 37.8
Nitab4.5_0008325g0010 Nicotiana tabacum HOM05D000056 ORTHO05D000019 7.8e-40 168.3 322 37.3
Nitab4.5_0000129g0040 Nicotiana tabacum HOM05D000056 ORTHO05D000019 1.2e-37 161.0 156 56.4
PGSC0003DMG400006530 Solanum tuberosum HOM05D000056 ORTHO05D000019 2.8e-37 159.8 324 35.5
Nitab4.5_0007973g0040 Nicotiana tabacum HOM05D000056 ORTHO05D000019 1.1e-36 157.9 311 36.0
PGSC0003DMG400006527 Solanum tuberosum HOM05D000056 ORTHO05D000019 1.1e-36 157.9 331 35.6
PGSC0003DMG400006523 Solanum tuberosum HOM05D000056 ORTHO05D000019 1.7e-34 150.6 321 36.4
Nitab4.5_0001379g0100 Nicotiana tabacum HOM05D000056 ORTHO05D000019 2.2e-34 150.2 325 32.6
Nitab4.5_0001052g0010 Nicotiana tabacum HOM05D000056 ORTHO05D000019 8.3e-34 148.3 327 33.3
Nitab4.5_0005997g0020 Nicotiana tabacum HOM05D000056 ORTHO05D000019 1.1e-33 147.9 175 48.6
Nitab4.5_0002707g0110 Nicotiana tabacum HOM05D000056 ORTHO05D000019 5.4e-33 145.6 316 33.2
Solyc01g057260.4 Solanum lycopersicum HOM05D000056 ORTHO05D000019 9.2e-33 144.8 299 37.5
Nitab4.5_0001983g0090 Nicotiana tabacum HOM05D000056 ORTHO05D000019 2.7e-32 143.3 318 33.6
PGSC0003DMG400020032 Solanum tuberosum HOM05D000056 ORTHO05D000019 7.8e-32 141.7 286 36.0
Nitab4.5_0000129g0070 Nicotiana tabacum HOM05D000056 ORTHO05D000019 3.3e-30 136.3 325 33.5
Nitab4.5_0002605g0030 Nicotiana tabacum HOM05D000056 ORTHO05D000019 3.3e-30 136.3 257 35.4
Nitab4.5_0007714g0010 Nicotiana tabacum HOM05D000056 ORTHO05D000019 1.2e-29 134.4 262 35.5
PGSC0003DMG400006526 Solanum tuberosum HOM05D000056 ORTHO05D000019 6.2e-29 132.1 326 34.0
Sopen04g004080 Solanum pennellii HOM05D000056 ORTHO05D000019 8.1e-29 131.7 288 36.8
PGSC0003DMG400016930 Solanum tuberosum HOM05D000056 ORTHO05D000019 2.3e-28 130.2 335 32.8
Nitab4.5_0003038g0080 Nicotiana tabacum HOM05D000056 ORTHO05D000019 3.1e-28 129.8 269 34.6
PGSC0003DMG400006524 Solanum tuberosum HOM05D000056 ORTHO05D000019 6.8e-28 128.6 315 32.7
PGSC0003DMG400006535 Solanum tuberosum HOM05D000056 ORTHO05D000019 4.4e-27 125.9 301 34.2
Nitab4.5_0008730g0020 Nicotiana tabacum HOM05D000056 ORTHO05D000019 8.3e-26 121.7 174 41.4
PGSC0003DMG400006538 Solanum tuberosum HOM05D000056 ORTHO05D000019 2.4e-25 120.2 326 32.2
PGSC0003DMG400025290 Solanum tuberosum HOM05D000056 ORTHO05D000019 4.1e-25 119.4 288 34.4
Solyc04g008910.3 Solanum lycopersicum HOM05D000056 ORTHO05D000019 1.2e-24 117.9 269 36.8
PGSC0003DMG400006528 Solanum tuberosum HOM05D000056 ORTHO05D000019 3.5e-24 116.3 294 32.7
PGSC0003DMG400006529 Solanum tuberosum HOM05D000056 ORTHO05D000019 7.8e-24 115.2 318 28.9
Nitab4.5_0001950g0030 Nicotiana tabacum HOM05D000056 ORTHO05D000019 1.0e-23 114.8 302 31.1
PGSC0003DMG400014977 Solanum tuberosum HOM05D000056 ORTHO05D000019 3.9e-23 112.8 254 34.3
PGSC0003DMG400027922 Solanum tuberosum HOM05D000056 ORTHO05D000019 5.1e-23 112.5 211 38.4
Nitab4.5_0003038g0060 Nicotiana tabacum HOM05D000056 ORTHO05D000019 6.6e-23 112.1 248 33.5
PGSC0003DMG400020033 Solanum tuberosum HOM05D000056 ORTHO05D000019 4.3e-22 109.4 299 30.4
PGSC0003DMG400006525 Solanum tuberosum HOM05D000056 ORTHO05D000019 5.2e-20 102.4 265 32.5
Peaxi162Scf00681g00330 Petunia axillaris HOM05D000056 ORTHO05D000019 1.7e-18 97.4 250 32.8
Solyc04g008900.4 Solanum lycopersicum HOM05D000056 ORTHO05D000019 3.8e-18 96.3 299 28.4
Sopen04g004110 Solanum pennellii HOM05D000056 ORTHO05D000019 4.9e-18 95.9 308 31.2
Migut.L00801 Erythranthe guttata HOM05D000056 ORTHO05D000019 1.1e-17 94.7 334 26.9
PGSC0003DMG400010921 Solanum tuberosum HOM05D000056 ORTHO05D000019 2.4e-17 93.6 218 33.0
Nitab4.5_0000129g0080 Nicotiana tabacum HOM05D000056 ORTHO05D000019 7.1e-17 92.0 199 35.2
Nitab4.5_0000037g0300 Nicotiana tabacum HOM05D000056 ORTHO05D000019 9.3e-17 91.7 166 37.3
Nitab4.5_0000129g0050 Nicotiana tabacum HOM05D000056 ORTHO05D000019 2.7e-16 90.1 104 45.2
Nitab4.5_0002893g0060 Nicotiana tabacum HOM05D000056 ORTHO05D000019 2.7e-16 90.1 176 36.4
Nitab4.5_0003038g0120 Nicotiana tabacum HOM05D000056 ORTHO05D000019 6.0e-16 89.0 90 54.4
Nitab4.5_0006183g0010 Nicotiana tabacum HOM05D000056 ORTHO05D000019 2.3e-15 87.0 86 50.0
PGSC0003DMG400010922 Solanum tuberosum HOM05D000056 ORTHO05D000019 3.0e-15 86.7 287 30.7
Nitab4.5_0000129g0140 Nicotiana tabacum HOM05D000056 ORTHO05D000019 5.1e-15 85.9 105 47.6
Nitab4.5_0002893g0070 Nicotiana tabacum HOM05D000056 ORTHO05D000019 1.1e-14 84.7 174 35.6
Sopen04g008090 Solanum pennellii HOM05D000056 ORTHO05D000019 1.5e-14 84.3 90 50.0
Nitab4.5_0025287g0010 Nicotiana tabacum HOM05D000056 ORTHO05D000019 4.3e-14 82.8 85 54.1
Nitab4.5_0002707g0080 Nicotiana tabacum HOM05D000056 ORTHO05D000019 7.3e-14 82.0 91 51.6
PGSC0003DMG400025289 Solanum tuberosum HOM05D000056 ORTHO05D000019 9.6e-14 81.6 204 29.9
Nitab4.5_0005366g0040 Nicotiana tabacum HOM05D000056 ORTHO05D000019 4.8e-13 79.3 217 30.0
PGSC0003DMG400025291 Solanum tuberosum HOM05D000056 ORTHO05D000019 4.0e-12 76.3 63 61.9
Nitab4.5_0026630g0010 Nicotiana tabacum HOM05D000056 ORTHO05D000019 5.3e-12 75.9 85 50.6
Sopen01g021850 Solanum pennellii HOM05D000056 ORTHO05D010855 5.3e-12 75.9 176 38.1
Sopen04g004100 Solanum pennellii HOM05D000056 ORTHO05D000019 6.9e-12 75.5 90 46.7
Nitab4.5_0003038g0100 Nicotiana tabacum HOM05D000056 ORTHO05D000019 1.5e-11 74.3 73 58.9
Nitab4.5_0000129g0150 Nicotiana tabacum HOM05D000056 ORTHO05D000019 3.4e-11 73.2 160 35.0
Duzib212G0224 Durio zibethinus HOM05D000056 ORTHO05D000019 7.6e-11 72.0 268 26.1
CSS0046448 Camellia sinensis var. sinensis HOM05D000056 ORTHO05D000019 2.2e-10 70.5 286 26.2
Nitab4.5_0005356g0060 Nicotiana tabacum HOM05D000056 ORTHO05D000019 2.2e-10 70.5 64 56.2
Hma1.2p1_1499F.1_g287270 Hydrangea macrophylla HOM05D000056 ORTHO05D000019 3.8e-10 69.7 291 25.4
Haze_10880 Corylus avellana HOM05D000056 ORTHO05D000019 4.9e-10 69.3 281 24.2
Hma1.2p1_1782F.1_g302110 Hydrangea macrophylla HOM05D000056 ORTHO05D000019 6.4e-10 68.9 293 25.6
Dinv40386 Davidia involucrata HOM05D000056 ORTHO05D000019 8.4e-10 68.6 287 27.2
Haze_10059 Corylus avellana HOM05D000056 ORTHO05D000019 1.1e-09 68.2 283 23.3
Nitab4.5_0001052g0100 Nicotiana tabacum HOM05D022186 ORTHO05D000019 2.4e-09 67.0 123 35.8
Eucgr.C01795 Eucalyptus grandis HOM05D000056 ORTHO05D000019 4.2e-09 66.2 286 24.5
CSS0002375 Camellia sinensis var. sinensis HOM05D000056 ORTHO05D000019 7.1e-09 65.5 286 25.2
Nitab4.5_0025287g0020 Nicotiana tabacum HOM05D000056 ORTHO05D000019 9.3e-09 65.1 75 50.7
Nitab4.5_0026630g0020 Nicotiana tabacum HOM05D000056 ORTHO05D000019 1.6e-08 64.3 64 54.7
TAR626G1288 Trochodendron aralioides HOM05D000056 ORTHO05D000019 1.6e-08 64.3 282 23.4
Gohir.A09G052600 Gossypium hirsutum HOM05D000056 ORTHO05D000019 3.5e-08 63.2 287 22.6
QL10p050252 Quercus lobata HOM05D000056 ORTHO05D000019 3.5e-08 63.2 287 24.4
Dinv38273 Davidia involucrata HOM05D000056 ORTHO05D000019 6.0e-08 62.4 281 23.5
Potri.003G181600 Populus trichocarpa HOM05D000056 ORTHO05D000019 6.0e-08 62.4 292 24.3
Gorai.006G055900 Gossypium raimondii HOM05D000056 ORTHO05D000019 7.8e-08 62.0 287 23.3
Thecc.01G390100 Theobroma cacao HOM05D000056 ORTHO05D000019 7.8e-08 62.0 273 26.7
Thecc.01G390300 Theobroma cacao HOM05D000056 ORTHO05D000019 7.8e-08 62.0 277 27.1
Nn4g24368 Nelumbo nucifera HOM05D000056 ORTHO05D000019 1.3e-07 61.2 286 24.1
Potri.003G206101 Populus trichocarpa HOM05D000056 ORTHO05D000019 1.3e-07 61.2 286 23.8
Cc03_g06660 Coffea canephora HOM05D000056 ORTHO05D000019 1.7e-07 60.8 285 23.9
Duzib128G1193 Durio zibethinus HOM05D000056 ORTHO05D000019 1.7e-07 60.8 269 24.5
Gohir.D09G052972 Gossypium hirsutum HOM05D000056 ORTHO05D000019 3.0e-07 60.1 284 23.2
MBI18_g43809_MAGBIO Magnolia biondii HOM05D000056 ORTHO05D000019 3.0e-07 60.1 270 24.1
QL10p050388 Quercus lobata HOM05D000056 ORTHO05D000019 3.0e-07 60.1 289 22.5
QL10p050475 Quercus lobata HOM05D000056 ORTHO05D000019 3.0e-07 60.1 289 21.5
Thecc.04G211100 Theobroma cacao HOM05D000056 ORTHO05D000019 3.0e-07 60.1 290 24.8
Hma1.2p1_0170F.1_g075490 Hydrangea macrophylla HOM05D000056 ORTHO05D000019 3.9e-07 59.7 285 23.9
Lj8C681T0 Lonicera japonica HOM05D000056 ORTHO05D000019 3.9e-07 59.7 290 23.1
Oeu034625.1 Olea europaea HOM05D000056 ORTHO05D000019 3.9e-07 59.7 283 24.7
Cc03_g06600 Coffea canephora HOM05D000056 ORTHO05D000019 5.1e-07 59.3 274 25.5
Cc03_g06650 Coffea canephora HOM05D000056 ORTHO05D000019 5.1e-07 59.3 274 25.5
Manes.03G151600 Manihot esculenta HOM05D000056 ORTHO05D000019 5.1e-07 59.3 275 23.6
Medtr6g009610 Medicago truncatula HOM05D000056 ORTHO05D000019 5.1e-07 59.3 286 25.2
PGR031G0752 Punica granatum HOM05D000056 ORTHO05D000019 5.1e-07 59.3 279 22.6
SalBow1G4240 Salvia bowleyana HOM05D000056 ORTHO05D000019 5.1e-07 59.3 288 23.6
Solyc05g041500.1 Solanum lycopersicum HOM05D000056 ORTHO05D000019 5.1e-07 59.3 71 45.1
Dinv03562 Davidia involucrata HOM05D000056 ORTHO05D000019 6.6e-07 58.9 269 23.8
Dinv15973 Davidia involucrata HOM05D000056 ORTHO05D000019 6.6e-07 58.9 300 22.3
Dinv18223 Davidia involucrata HOM05D000056 ORTHO05D000019 6.6e-07 58.9 300 22.3
Nitab4.5_0001052g0110 Nicotiana tabacum HOM05D000056 ORTHO05D000019 6.6e-07 58.9 73 47.9
Potri.003G181800 Populus trichocarpa HOM05D000056 ORTHO05D000019 6.6e-07 58.9 292 24.0
Potri.003G206501 Populus trichocarpa HOM05D000056 ORTHO05D000019 6.6e-07 58.9 299 23.1
QL05p011042 Quercus lobata HOM05D000056 ORTHO05D000019 6.6e-07 58.9 289 23.9
Dinv01687 Davidia involucrata HOM05D000056 ORTHO05D000019 8.7e-07 58.5 321 24.3
Dinv40382 Davidia involucrata HOM05D000056 ORTHO05D000019 8.7e-07 58.5 321 24.3
Solyc04g016030.1 Solanum lycopersicum HOM05D000056 ORTHO05D000019 8.7e-07 58.5 74 45.9
Migut.G01117 Erythranthe guttata HOM05D000056 ORTHO05D000019 1.1e-06 58.2 271 23.6
Manes.03G150800 Manihot esculenta HOM05D000056 ORTHO05D000019 1.1e-06 58.2 292 22.9
Manes.03G150900 Manihot esculenta HOM05D000056 ORTHO05D000019 1.1e-06 58.2 284 22.5
Peaxi162Scf00209g00099 Petunia axillaris HOM05D000056 ORTHO05D000019 1.1e-06 58.2 263 24.0
Thecc.04G211000 Theobroma cacao HOM05D000056 ORTHO05D000019 1.1e-06 58.2 294 23.8
Dinv38197 Davidia involucrata HOM05D000056 ORTHO05D000019 1.5e-06 57.8 291 25.8
Eucgr.A00659 Eucalyptus grandis HOM05D000056 ORTHO05D000019 1.5e-06 57.8 52 50.0
QL10p050406 Quercus lobata HOM05D000056 ORTHO05D000019 1.5e-06 57.8 289 22.1
SalBow1G6589 Salvia bowleyana HOM05D000056 ORTHO05D000019 1.5e-06 57.8 288 25.0
Eucgr.A00663 Eucalyptus grandis HOM05D000056 ORTHO05D000019 1.9e-06 57.4 46 56.5
Lj8C688T0 Lonicera japonica HOM05D000056 ORTHO05D000019 1.9e-06 57.4 279 22.6
Lalb_Chr01g0018301 Lupinus albus HOM05D000056 ORTHO05D000019 1.9e-06 57.4 90 36.7
RcHm_v2.0_Chr2g0111831 Rosa chinensis HOM05D000056 ORTHO05D000019 1.9e-06 57.4 317 24.0
SalBow1G4152 Salvia bowleyana HOM05D000056 ORTHO05D000019 1.9e-06 57.4 279 25.1
CAN.G419.4 Capsicum annuum HOM05D000056 ORTHO05D115822 2.5e-06 57.0 72 43.1
Ciclev10005168m.g Citrus clementina HOM05D000056 ORTHO05D000019 2.5e-06 57.0 267 24.7
Hma1.2p1_1660F.1_g296210 Hydrangea macrophylla HOM05D000056 ORTHO05D000019 2.5e-06 57.0 316 25.9
Ciclev10015342m.g Citrus clementina HOM05D000056 ORTHO05D000019 3.3e-06 56.6 291 24.7
Ciclev10015467m.g Citrus clementina HOM05D000056 ORTHO05D000019 3.3e-06 56.6 298 22.1
Medtr6g010920 Medicago truncatula HOM05D000056 ORTHO05D000019 3.3e-06 56.6 286 22.7
Sopen05g002640 Solanum pennellii HOM05D000056 ORTHO05D000019 3.3e-06 56.6 311 21.9
PSO532G0051 Papaver somniferum HOM05D000056 ORTHO05D000019 4.3e-06 56.2 287 23.0
CiPaw.15G129000 Carya illinoinensis HOM05D000056 ORTHO05D000019 5.6e-06 55.8 256 24.2
Migut.G00735 Erythranthe guttata HOM05D000056 ORTHO05D000019 5.6e-06 55.8 296 23.6
Lj8A653T14 Lonicera japonica HOM05D000056 ORTHO05D000019 5.6e-06 55.8 291 23.7
Lj8C654T0 Lonicera japonica HOM05D000056 ORTHO05D000019 5.6e-06 55.8 279 25.4
Oeu016704.1 Olea europaea HOM05D000056 ORTHO05D000019 5.6e-06 55.8 287 20.6
Oeu034626.1 Olea europaea HOM05D000056 ORTHO05D000019 5.6e-06 55.8 266 25.6
PSO675G6503 Papaver somniferum HOM05D000056 ORTHO05D000019 5.6e-06 55.8 293 22.9
SalBow8G0908 Salvia bowleyana HOM05D000056 ORTHO05D000019 5.6e-06 55.8 294 23.5
Actinidia11937 Actinidia chinensis HOM05D000056 ORTHO05D000019 7.3e-06 55.5 261 27.6
CiPaw.06G176200 Carya illinoinensis HOM05D000056 ORTHO05D000019 7.3e-06 55.5 300 22.0
Ciclev10005120m.g Citrus clementina HOM05D000056 ORTHO05D000019 7.3e-06 55.5 271 27.7
Dinv01689 Davidia involucrata HOM05D000056 ORTHO05D000019 7.3e-06 55.5 89 34.8
Eucgr.A00673 Eucalyptus grandis HOM05D000056 ORTHO05D000019 7.3e-06 55.5 52 48.1
Lj8C664T8 Lonicera japonica HOM05D000056 ORTHO05D000019 7.3e-06 55.5 305 21.3
Haze_21472 Corylus avellana HOM05D000056 ORTHO05D000019 9.6e-06 55.1 287 24.4
Dinv15978 Davidia involucrata HOM05D000056 ORTHO05D000019 9.6e-06 55.1 294 23.5
Lj8C669T7 Lonicera japonica HOM05D000056 ORTHO05D000019 9.6e-06 55.1 267 23.6
Lj8C676T2 Lonicera japonica HOM05D000056 ORTHO05D000019 9.6e-06 55.1 299 24.1
Medtr6g011050 Medicago truncatula HOM05D000056 ORTHO05D000019 9.6e-06 55.1 281 23.1
Oeu012685.1 Olea europaea HOM05D000056 ORTHO05D000019 9.6e-06 55.1 293 22.9


User provided reference genes

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