Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0003033g0060 Nicotiana tabacum HOM05D006014 ORTHO05D007608 8.7e-94 347.1 187 100.0
Nitab4.5_0000332g0180 Nicotiana tabacum HOM05D006014 ORTHO05D007608 2.5e-77 292.4 189 88.4
Nitab4.5_0013317g0010 Nicotiana tabacum HOM05D006014 ORTHO05D007608 8.5e-73 277.3 189 79.9
Peaxi162Scf00069g01737 Petunia axillaris HOM05D006014 ORTHO05D007608 1.7e-68 263.1 183 78.7
Solyc07g062870.3 Solanum lycopersicum HOM05D006014 ORTHO05D007608 3.1e-67 258.8 187 77.0
Sopen07g031070 Solanum pennellii HOM05D006014 ORTHO05D007608 3.1e-67 258.8 187 77.0
Hma1.2p1_1411F.1_g281760 Hydrangea macrophylla HOM05D006014 ORTHO05D007608 7.7e-66 254.2 174 80.5
PGSC0003DMG400012405 Solanum tuberosum HOM05D006014 ORTHO05D007608 2.2e-65 252.7 187 76.5
Cc05_g11740 Coffea canephora HOM05D006014 ORTHO05D007608 1.5e-64 250.0 169 78.7
Nitab4.5_0002330g0100 Nicotiana tabacum HOM05D006014 ORTHO05D007608 2.5e-64 249.2 206 69.4
CSS0037767 Camellia sinensis var. sinensis HOM05D006014 ORTHO05D007608 6.1e-63 244.6 173 76.9
Dinv14938 Davidia involucrata HOM05D006014 ORTHO05D007608 1.4e-62 243.4 178 77.5
Ciclev10009636m.g Citrus clementina HOM05D006014 ORTHO05D007608 4.0e-62 241.9 174 76.4
DCAR_019570 Daucus carota HOM05D006014 ORTHO05D007608 1.5e-61 240.0 180 74.4
Thecc.07G096300 Theobroma cacao HOM05D006014 ORTHO05D007608 1.5e-61 240.0 185 73.5
TWI38G2086 Tripterygium wilfordii HOM05D006014 ORTHO05D007608 1.8e-59 233.0 172 72.7
COL.COLO4_03477 Corchorus olitorius HOM05D006014 ORTHO05D007608 7.0e-59 231.1 185 72.4
GSVIVG01014290001 Vitis vinifera HOM05D006014 ORTHO05D007608 7.0e-59 231.1 179 72.1
FAN21G0470 Fragaria x ananassa HOM05D006014 ORTHO05D007608 2.0e-58 229.6 173 75.1
ClCG11G017820 Citrullus lanatus HOM05D006014 ORTHO05D007608 3.5e-58 228.8 182 71.4
FAN25G0078 Fragaria x ananassa HOM05D006014 ORTHO05D007608 1.3e-57 226.9 173 74.0
FvH4_3g19430 Fragaria vesca HOM05D006014 ORTHO05D007608 1.7e-57 226.5 173 74.0
FAN11G2300 Fragaria x ananassa HOM05D006014 ORTHO05D007608 1.7e-57 226.5 173 74.0
Manes.15G089600 Manihot esculenta HOM05D006014 ORTHO05D007608 2.2e-57 226.1 186 69.9
Gohir.D05G347800 Gossypium hirsutum HOM05D006014 ORTHO05D007608 2.9e-57 225.7 180 72.2
Gorai.009G375600 Gossypium raimondii HOM05D006014 ORTHO05D007608 2.9e-57 225.7 180 72.2
Gohir.A04G035600 Gossypium hirsutum HOM05D006014 ORTHO05D007608 6.5e-57 224.6 180 72.8
Duzib170G0605 Durio zibethinus HOM05D006014 ORTHO05D007608 1.1e-56 223.8 187 70.1
Oeu051088.1 Olea europaea HOM05D006014 ORTHO05D007608 1.5e-56 223.4 183 72.1
Prupe.4G176000 Prunus persica HOM05D006014 ORTHO05D007608 1.9e-56 223.0 175 71.4
RcHm_v2.0_Chr5g0032711 Rosa chinensis HOM05D006014 ORTHO05D007608 1.9e-56 223.0 177 72.3
Nn1g04203 Nelumbo nucifera HOM05D006014 ORTHO05D007608 2.5e-56 222.6 170 74.1
Haze_09409 Corylus avellana HOM05D005607 ORTHO05D008142 4.2e-56 221.9 143 83.2
Oeu037371.1 Olea europaea HOM05D006014 ORTHO05D007608 4.2e-56 221.9 156 76.9
QL08p024005 Quercus lobata HOM05D006014 ORTHO05D007608 4.2e-56 221.9 175 71.4
Sed0004006 Sechium edule HOM05D006014 ORTHO05D007608 4.2e-56 221.9 179 72.1
CANSAT35G1465 Cannabis sativa HOM05D006014 ORTHO05D007608 9.4e-56 220.7 173 72.3
MD11G1253300 Malus domestica HOM05D006014 ORTHO05D007608 1.2e-55 220.3 177 71.8
MD03G1232600 Malus domestica HOM05D006014 ORTHO05D007608 1.6e-55 219.9 172 72.7
Migut.H01957 Erythranthe guttata HOM05D006014 ORTHO05D007608 2.1e-55 219.5 166 75.3
TAR626G1430 Trochodendron aralioides HOM05D006014 ORTHO05D007608 3.6e-55 218.8 181 70.2
Potri.001G396600 Populus trichocarpa HOM05D006014 ORTHO05D007608 6.1e-55 218.0 179 69.8
CiPaw.11G167800 Carya illinoinensis HOM05D006014 ORTHO05D007608 1.0e-54 217.2 149 78.5
PGR083G0398 Punica granatum HOM05D006014 ORTHO05D007608 1.0e-54 217.2 184 69.6
MELO3C025609.2 Cucumis melo HOM05D006014 ORTHO05D007608 1.8e-54 216.5 185 68.1
Eucgr.F01167 Eucalyptus grandis HOM05D006014 ORTHO05D007608 3.0e-54 215.7 183 72.1
HanXRQChr10g0302621 Helianthus annuus HOM05D006014 ORTHO05D007608 3.0e-54 215.7 184 69.6
CsaV3_4G033460 Cucumis sativus L. HOM05D006014 ORTHO05D007608 4.0e-54 215.3 185 68.6
Lsat_1_v5_gn_5_128220 Lactuca sativa HOM05D006014 ORTHO05D007608 4.0e-54 215.3 188 70.2
Sabra16G0259700 Salix brachista HOM05D006014 ORTHO05D007608 4.0e-54 215.3 179 68.2
TAR624G0768 Trochodendron aralioides HOM05D006014 ORTHO05D007608 2.0e-53 213.0 138 81.9
MSTRG.12894 Avicennia marina HOM05D006014 ORTHO05D007608 2.6e-53 212.6 190 69.5
SalBow8G3070 Salvia bowleyana HOM05D006014 ORTHO05D007608 5.7e-53 211.5 176 71.6
Ca_23028_v3 Cicer arietinum L. HOM05D006014 ORTHO05D007608 4.5e-50 201.8 171 66.7
Ca_23030_v3 Cicer arietinum L. HOM05D006014 ORTHO05D007608 4.5e-50 201.8 171 66.7
BcaB04g20944 Brassica carinata HOM05D006014 ORTHO05D007608 1.0e-49 200.7 183 64.5
BolC1t04895H Brassica oleracea HOM05D006014 ORTHO05D007608 1.3e-49 200.3 192 62.0
Glyma.12G162300 Glycine max HOM05D006014 ORTHO05D007608 2.2e-49 199.5 178 66.3
A05p34280 Brassica napus HOM05D006014 ORTHO05D007608 3.8e-49 198.7 197 60.9
BraA05t22249Z Brassica rapa HOM05D006014 ORTHO05D007608 3.8e-49 198.7 197 60.9
A01p38830 Brassica napus HOM05D006014 ORTHO05D007608 6.5e-49 198.0 191 63.4
BraA01t03929Z Brassica rapa HOM05D006014 ORTHO05D007608 6.5e-49 198.0 191 63.4
Glyma.06G236200 Glycine max HOM05D006014 ORTHO05D007608 6.5e-49 198.0 178 66.9
TPR.G28172 Trifolium pratense HOM05D006014 ORTHO05D007608 6.5e-49 198.0 176 65.3
Lj3g0022855 Lotus japonicus HOM05D006014 ORTHO05D007608 1.9e-48 196.4 172 65.7
CARHR090180 Cardamine hirsuta HOM05D006014 ORTHO05D007608 2.5e-48 196.1 193 62.7
Aqoxy1G02326 Aquilegia oxysepala HOM05D006014 ORTHO05D007608 3.2e-48 195.7 182 61.5
BcaB06g29543 Brassica carinata HOM05D006014 ORTHO05D007608 3.2e-48 195.7 197 60.4
C01p49380 Brassica napus HOM05D006014 ORTHO05D007608 3.2e-48 195.7 192 61.5
Sp3g13400 Schrenkiella parvula HOM05D006014 ORTHO05D007608 4.2e-48 195.3 196 61.2
A03p39200 Brassica napus HOM05D006014 ORTHO05D007608 5.5e-48 194.9 193 62.2
Cfa020606 Carpinus fangiana HOM05D006014 ORTHO05D007608 9.4e-48 194.1 127 84.3
Sc03g0010200 Simmondsia chinensis HOM05D006014 ORTHO05D007608 1.2e-47 193.7 177 64.4
VMungo1127G0848 Vigna mungo HOM05D006014 ORTHO05D007608 1.2e-47 193.7 175 64.0
BraA03t13069Z Brassica rapa HOM05D006014 ORTHO05D007608 1.6e-47 193.4 193 61.7
Ah.06g184580 Amaranthus hybridus HOM05D006014 ORTHO05D007608 2.7e-47 192.6 176 62.5
AL3G27580 Arabidopsis lyrata HOM05D006014 ORTHO05D007608 3.6e-47 192.2 187 63.1
Aa31LG8G2390 Aethionema arabicum HOM05D006014 ORTHO05D007608 4.7e-47 191.8 193 58.5
ECA234G0345 Erigeron canadensis HOM05D006014 ORTHO05D007608 4.7e-47 191.8 180 64.4
THA.LOC104815561 Tarenaya hassleriana HOM05D006014 ORTHO05D007608 4.7e-47 191.8 185 62.2
C05p52040 Brassica napus HOM05D006014 ORTHO05D007608 6.1e-47 191.4 195 59.5
AUR62019472 Chenopodium quinoa HOM05D006014 ORTHO05D007608 1.0e-46 190.7 174 64.4
AT3G15190 Arabidopsis thaliana HOM05D006014 ORTHO05D007608 1.4e-46 190.3 192 62.0
AUR62036161 Chenopodium quinoa HOM05D006014 ORTHO05D007608 1.4e-46 190.3 174 64.4
PSO541G1420 Papaver somniferum HOM05D006014 ORTHO05D007608 1.4e-46 190.3 154 68.2
PSO675G1148 Papaver somniferum HOM05D006014 ORTHO05D007608 1.4e-46 190.3 154 68.2
Psat4g136440 Pisum sativum HOM05D006014 ORTHO05D007608 3.0e-46 189.1 173 62.4
CDE10G0058 Ceratophyllum demersum HOM05D006014 ORTHO05D007608 6.8e-46 188.0 176 64.2
Thhalv10021521m.g Eutrema salsugineum HOM05D006014 ORTHO05D007608 8.8e-46 187.6 199 59.3
Lalb_Chr07g0182891 Lupinus albus HOM05D006014 ORTHO05D007608 8.8e-46 187.6 179 60.9
Carub.0003s1484 Capsella rubella HOM05D006014 ORTHO05D007608 2.0e-45 186.4 186 62.4
EL10Ac4g08237 Beta vulgaris HOM05D006014 ORTHO05D007608 5.7e-45 184.9 177 63.8
CDE10G1292 Ceratophyllum demersum HOM05D006014 ORTHO05D007608 5.7e-45 184.9 173 64.2
MBI07_g30170_MAGBIO Magnolia biondii HOM05D006014 ORTHO05D007608 1.3e-44 183.7 134 73.1
Phvul.011G162800 Phaseolus vulgaris HOM05D006014 ORTHO05D007608 1.7e-44 183.3 175 62.3
BcaC01g03887 Brassica carinata HOM05D006014 ORTHO05D007608 2.2e-44 183.0 131 74.8
C03p47570 Brassica napus HOM05D006014 ORTHO05D007608 2.2e-44 183.0 131 74.8
BolC3t17032H Brassica oleracea HOM05D006014 ORTHO05D007608 2.2e-44 183.0 131 74.8
Rhsim04G0022600 Rhododendron simsii HOM05D006014 ORTHO05D007608 2.2e-44 183.0 177 60.5
Hund04492 Selenicereus undatus HOM05D006014 ORTHO05D007608 2.2e-44 183.0 181 60.2
Actinidia35240 Actinidia chinensis HOM05D006014 ORTHO05D007608 3.7e-44 182.2 118 83.9
Medtr8g061350 Medicago truncatula HOM05D006014 ORTHO05D007608 3.7e-44 182.2 176 63.6
unitig_749.g13531 Utricularia gibba HOM05D005607 ORTHO05D008142 9.1e-43 177.6 190 61.1
arahy.Tifrunner.gnm1.ann1.FY4UJ9 Arachis hypogaea HOM05D006014 ORTHO05D007608 1.2e-42 177.2 215 53.0
TWI39G1175 Tripterygium wilfordii HOM05D006014 ORTHO05D007608 3.5e-42 175.6 126 75.4
Sed0026173 Sechium edule HOM05D006014 ORTHO05D007608 3.8e-41 172.2 176 60.8
ATR0737G141 Amborella trichopoda HOM05D006014 ORTHO05D007608 6.1e-39 164.9 116 75.9
arahy.Tifrunner.gnm1.ann1.QT5AN8 Arachis hypogaea HOM05D006014 ORTHO05D007608 1.3e-36 157.1 264 42.4
SEGI_01083 Sequoiadendron giganteum HOM05D006014 ORTHO05D007608 1.8e-35 153.3 174 56.3
Lj8A154T77 Lonicera japonica HOM05D006014 ORTHO05D007608 3.0e-33 146.0 177 54.8
Lj3g0017472 Lotus japonicus HOM05D006014 ORTHO05D007608 1.2e-31 140.6 123 65.9
Mapoly0009s0159 Marchantia polymorpha HOM05D006014 ORTHO05D007608 1.0e-30 137.5 187 49.7
SGA_v2.0_scaffold70G23686 Striga asiatica HOM05D006014 ORTHO05D007608 3.1e-30 136.0 342 36.5
Zm00001eb360330 Zea mays HOM05D006014 ORTHO05D007608 3.4e-29 132.5 171 49.1
Os01g0678600 Oryza sativa ssp. japonica HOM05D006014 ORTHO05D007608 8.3e-28 127.9 198 45.5
Pp3c24_17080 Physcomitrium patens HOM05D006014 ORTHO05D007608 1.9e-27 126.7 186 47.3
BcaC09g48477 Brassica carinata HOM05D006014 ORTHO05D007608 3.5e-26 122.5 139 56.1
Pp3c20_13390 Physcomitrium patens HOM05D006014 ORTHO05D007608 3.0e-25 119.4 128 53.1
CBR_g30802 Chara braunii HOM05D006014 ORTHO05D007608 6.6e-25 118.2 155 49.0
vmacro09523 Vaccinium macrocarpon HOM05D006014 ORTHO05D007608 1.9e-24 116.7 76 73.7
Dinv20203 Davidia involucrata HOM05D006014 ORTHO05D007608 3.6e-23 112.5 114 64.9
AagrBONN_evm.TU.Sc2ySwM_344.3794 Anthoceros agrestis HOM05D006014 ORTHO05D007608 5.2e-22 108.6 183 42.6
Gohir.A13G146850 Gossypium hirsutum HOM05D006014 ORTHO05D007608 1.7e-17 93.6 81 67.9
CBR_g39307 Chara braunii HOM05D006014 ORTHO05D007608 2.3e-17 93.2 81 60.5
Cre12.g494750 Chlamydomonas reinhardtii HOM05D006014 ORTHO05D007608 2.5e-16 89.7 144 43.8
Cpa.g.sc131.85 Carica papaya HOM05D006014 ORTHO05D007608 1.2e-15 87.4 98 55.1
HPP92_010061 Vanilla planifolia HOM05D006014 ORTHO05D007608 3.7e-12 75.9 111 51.4
Atru.chr2.2408 Acer truncatum HOM05D006014 ORTHO05D007608 3.2e-11 72.8 53 79.2
MCO10G118 Micromonas commoda HOM05D006014 ORTHO05D007608 4.1e-11 72.4 81 49.4
QL11p029078 Quercus lobata HOM05D006014 ORTHO05D013998 6.6e-09 65.1 80 51.2


User provided reference genes

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