Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0003021g0070 Nicotiana tabacum HOM05D007763 ORTHO05D009537 2.1e-63 247.7 157 100.0
Sopen06g027000 Solanum pennellii HOM05D007763 ORTHO05D009537 6.8e-46 189.5 152 82.9
CAN.G587.9 Capsicum annuum HOM05D007763 ORTHO05D009537 1.1e-40 172.2 152 81.6
Peaxi162Scf00013g00410 Petunia axillaris HOM05D007763 ORTHO05D009537 1.5e-40 171.8 148 77.7
Nitab4.5_0004286g0010 Nicotiana tabacum HOM05D007763 ORTHO05D009537 4.3e-40 170.2 118 96.6
Solyc06g069700.4 Solanum lycopersicum HOM05D007763 ORTHO05D009537 1.8e-38 164.9 136 83.1
CSS0022156 Camellia sinensis var. sinensis HOM05D007763 ORTHO05D009537 4.9e-12 77.0 77 46.8
Gohir.D03G094100 Gossypium hirsutum HOM05D007763 ORTHO05D009537 1.1e-11 75.9 76 46.1
Actinidia04871 Actinidia chinensis HOM05D007763 ORTHO05D009537 1.4e-11 75.5 95 41.1
Gorai.003G098200 Gossypium raimondii HOM05D007763 ORTHO05D009537 3.2e-11 74.3 76 46.1
Gohir.A03G067600 Gossypium hirsutum HOM05D007763 ORTHO05D009537 5.4e-11 73.6 72 47.2
MSTRG.11374 Avicennia marina HOM05D007763 ORTHO05D009537 7.1e-11 73.2 84 44.0
Oeu052450.2 Olea europaea HOM05D007763 ORTHO05D009537 9.3e-11 72.8 47 57.4
Rhsim08G0152400 Rhododendron simsii HOM05D000001 ORTHO05D010304 9.3e-11 72.8 47 59.6
Migut.I00207 Erythranthe guttata HOM05D007763 ORTHO05D009537 1.6e-10 72.0 86 39.5
Lj9C466T13 Lonicera japonica HOM05D007763 ORTHO05D009537 1.6e-10 72.0 48 58.3
QL10p017571 Quercus lobata HOM05D007763 ORTHO05D009537 2.1e-10 71.6 48 60.4
ECA246G2275 Erigeron canadensis HOM05D007763 ORTHO05D009537 2.7e-10 71.2 91 37.4
Atru.chr12.1670 Acer truncatum HOM05D007763 ORTHO05D009537 4.6e-10 70.5 72 45.8
TPR.G27557 Trifolium pratense HOM05D007763 ORTHO05D009537 4.6e-10 70.5 127 32.3
Atru.chr12.1664 Acer truncatum HOM05D007763 ORTHO05D009537 6.0e-10 70.1 72 47.2
AUR62021645 Chenopodium quinoa HOM05D007763 ORTHO05D009537 6.0e-10 70.1 80 40.0
Phvul.009G185566 Phaseolus vulgaris HOM05D007763 ORTHO05D009537 6.0e-10 70.1 77 41.6
Duzib205G0970 Durio zibethinus HOM05D007763 ORTHO05D009537 7.8e-10 69.7 48 52.1
TAR622G0770 Trochodendron aralioides HOM05D007763 ORTHO05D009537 1.3e-09 68.9 47 57.4
Cc04_g15160 Coffea canephora HOM05D007763 ORTHO05D009537 1.7e-09 68.6 48 54.2
Nn2g12476 Nelumbo nucifera HOM05D007763 ORTHO05D009537 1.7e-09 68.6 48 54.2
HanXRQChr08g0236691 Helianthus annuus HOM05D007763 ORTHO05D009537 3.0e-09 67.8 77 40.3
arahy.Tifrunner.gnm1.ann1.NWYI6Z Arachis hypogaea HOM05D000001 ORTHO05D010304 3.9e-09 67.4 74 41.9
SGA_v2.0_scaffold25G10931 Striga asiatica HOM05D007763 ORTHO05D009537 3.9e-09 67.4 47 48.9
RcHm_v2.0_Chr7g0181881 Rosa chinensis HOM05D007763 ORTHO05D009537 5.1e-09 67.0 70 45.7
Thecc.03G093400 Theobroma cacao HOM05D007763 ORTHO05D009537 8.7e-09 66.2 93 36.6
Hma1.2p1_0060F.1_g033520 Hydrangea macrophylla HOM05D007763 ORTHO05D009537 1.1e-08 65.9 48 52.1
EL10Ac5g11053 Beta vulgaris HOM05D014602 ORTHO05D009537 1.5e-08 65.5 77 37.7
DCAR_002300 Daucus carota HOM05D007763 ORTHO05D009537 1.5e-08 65.5 47 57.4
Aqoxy3G00480 Aquilegia oxysepala HOM05D007763 ORTHO05D009537 1.9e-08 65.1 46 54.3
arahy.Tifrunner.gnm1.ann1.PFL66H Arachis hypogaea HOM05D007763 ORTHO05D009537 1.9e-08 65.1 73 41.1
THA.LOC104801471 Tarenaya hassleriana HOM05D007763 ORTHO05D009537 2.5e-08 64.7 68 44.1
Ciclev10024595m.g Citrus clementina HOM05D007763 ORTHO05D009537 5.6e-08 63.5 80 40.0
Haze_07298 Corylus avellana HOM05D007763 ORTHO05D010304 5.6e-08 63.5 48 56.2
Dinv38739 Davidia involucrata HOM05D007763 ORTHO05D001128 5.6e-08 63.5 47 55.3
Lsat_1_v5_gn_5_21540 Lactuca sativa HOM05D007763 ORTHO05D009537 7.3e-08 63.2 77 36.4
Sc12g0006490 Simmondsia chinensis HOM05D007763 ORTHO05D009537 9.6e-08 62.8 47 53.2
TWI60G1313 Tripterygium wilfordii HOM05D007763 ORTHO05D009537 9.6e-08 62.8 48 54.2
Ca_14664_v3 Cicer arietinum L. HOM05D007763 ORTHO05D009537 1.3e-07 62.4 74 39.2
COL.COLO4_36930 Corchorus olitorius HOM05D007763 ORTHO05D009537 1.3e-07 62.4 98 34.7
Atru.chr12.1659 Acer truncatum HOM05D007763 ORTHO05D009537 1.6e-07 62.0 74 43.2
Hund02629 Selenicereus undatus HOM05D007763 ORTHO05D019789 1.6e-07 62.0 43 60.5
Aqoxy2G01348 Aquilegia oxysepala HOM05D007763 ORTHO05D009537 2.1e-07 61.6 46 54.3
GSVIVG01007974001 Vitis vinifera HOM05D007763 ORTHO05D010304 2.1e-07 61.6 47 51.1
PSO017G0499 Papaver somniferum HOM05D007763 ORTHO05D009537 3.6e-07 60.8 48 50.0
vmacro17568 Vaccinium macrocarpon HOM05D007763 ORTHO05D009537 4.8e-07 60.5 56 51.8
AUR62008445 Chenopodium quinoa HOM05D007763 ORTHO05D009537 8.1e-07 59.7 44 59.1
FvH4_5g14610 Fragaria vesca HOM05D007763 ORTHO05D009537 8.1e-07 59.7 70 42.9
Manes.14G081200 Manihot esculenta HOM05D007763 ORTHO05D009537 8.1e-07 59.7 48 47.9
LjContig00102g0005353 Lotus japonicus HOM05D000001 ORTHO05D010304 1.1e-06 59.3 47 51.1
Prupe.5G197300 Prunus persica HOM05D007763 ORTHO05D009537 1.4e-06 58.9 46 47.8
PGR031G2821 Punica granatum HOM05D007763 ORTHO05D009537 1.8e-06 58.5 49 49.0
FAN18G1924 Fragaria x ananassa HOM05D007763 ORTHO05D009537 2.4e-06 58.2 70 41.4
CARHR275160 Cardamine hirsuta HOM05D007763 ORTHO05D009537 3.1e-06 57.8 58 44.8
FAN13G0255 Fragaria x ananassa HOM05D007763 ORTHO05D009537 4.0e-06 57.4 71 40.8
Aa31LG11G2020 Aethionema arabicum HOM05D007763 ORTHO05D009537 5.3e-06 57.0 68 38.2
Ah.02g113700 Amaranthus hybridus HOM05D007763 ORTHO05D009537 5.3e-06 57.0 47 48.9
Sed0000161 Sechium edule HOM05D007763 ORTHO05D009537 9.0e-06 56.2 48 47.9


User provided reference genes

Program Settings