Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0003016g0040 Nicotiana tabacum HOM05D004654 ORTHO05D005414 5.3e-111 404.4 215 100.0
Nitab4.5_0000235g0010 Nicotiana tabacum HOM05D004654 ORTHO05D005414 1.4e-98 363.2 219 90.4
PGSC0003DMG400037923 Solanum tuberosum HOM05D004654 ORTHO05D005414 9.8e-65 250.8 224 67.0
Nitab4.5_0008713g0040 Nicotiana tabacum HOM05D004654 ORTHO05D005414 1.7e-45 186.8 228 51.3
Solyc03g031950.3 Solanum lycopersicum HOM05D004654 ORTHO05D005414 6.2e-43 178.3 234 52.1
Sopen03g005810 Solanum pennellii HOM05D004654 ORTHO05D005414 2.3e-42 176.4 234 51.7
PGSC0003DMG400024083 Solanum tuberosum HOM05D004654 ORTHO05D005414 6.8e-42 174.9 234 52.1
Peaxi162Scf00918g00026 Petunia axillaris HOM05D004654 ORTHO05D005414 5.2e-34 148.7 221 51.1
Oeu024775.2 Olea europaea HOM05D004654 ORTHO05D005414 1.4e-31 140.6 222 49.5
SGA_v2.0_scaffold8G04582 Striga asiatica HOM05D004654 ORTHO05D005414 7.1e-31 138.3 229 46.7
Oeu034013.1 Olea europaea HOM05D004654 ORTHO05D005414 8.6e-29 131.3 215 47.9
Cc07_g12430 Coffea canephora HOM05D004654 ORTHO05D005414 1.4e-26 124.0 233 41.6
Migut.D00607 Erythranthe guttata HOM05D004654 ORTHO05D005414 4.9e-24 115.5 224 41.1
SalBow6G0287 Salvia bowleyana HOM05D004654 ORTHO05D005414 4.9e-24 115.5 223 42.2
unitig_90.g27472 Utricularia gibba HOM05D004654 ORTHO05D005414 6.4e-24 115.2 208 41.8
Rhsim08G0023400 Rhododendron simsii HOM05D004654 ORTHO05D005414 1.2e-22 110.9 216 40.7
Lsat_1_v5_gn_8_113741 Lactuca sativa HOM05D004654 ORTHO05D005414 2.7e-22 109.8 169 44.4
SGA_v2.0_scaffold247G44889 Striga asiatica HOM05D004654 ORTHO05D005414 6.6e-21 105.1 229 41.9
Actinidia17131 Actinidia chinensis HOM05D004654 ORTHO05D005414 4.3e-20 102.4 227 37.4
HanXRQChr16g0532651 Helianthus annuus HOM05D004654 ORTHO05D005414 1.6e-19 100.5 206 38.3
DCAR_002994 Daucus carota HOM05D004654 ORTHO05D005414 8.1e-19 98.2 218 39.0
Lsat_1_v5_gn_3_68821 Lactuca sativa HOM05D004654 ORTHO05D005414 4.0e-18 95.9 178 44.9
HanXRQChr15g0485191 Helianthus annuus HOM05D004654 ORTHO05D005414 5.3e-18 95.5 193 38.9
Peaxi162Scf00784g00044 Petunia axillaris HOM05D004654 ORTHO05D005414 2.0e-17 93.6 80 68.8
vmacro20421 Vaccinium macrocarpon HOM05D004654 ORTHO05D005414 1.7e-16 90.5 215 35.8
vmacro23510 Vaccinium macrocarpon HOM05D004654 ORTHO05D005414 2.2e-16 90.1 214 35.0
Dinv28280 Davidia involucrata HOM05D004654 ORTHO05D005414 4.9e-16 89.0 198 37.9
unitig_578.g16656 Utricularia gibba HOM05D004654 ORTHO05D005414 8.4e-16 88.2 102 46.1
Cpa.g.sc108.18 Carica papaya HOM05D004654 ORTHO05D005414 1.1e-15 87.8 218 34.4
Manes.01G125100 Manihot esculenta HOM05D004654 ORTHO05D005414 1.9e-15 87.0 207 35.3
Manes.02G082600 Manihot esculenta HOM05D004654 ORTHO05D005414 3.2e-15 86.3 214 37.9
Hma1.2p1_0085F.1_g044140 Hydrangea macrophylla HOM05D004654 ORTHO05D005414 4.2e-15 85.9 228 34.6
SGA_v2.0_scaffold42G16062 Striga asiatica HOM05D004654 ORTHO05D005414 4.2e-15 85.9 217 35.0
Lsat_1_v5_gn_2_72380 Lactuca sativa HOM05D004654 ORTHO05D005414 5.4e-15 85.5 164 37.2
Hma1.2p1_2924F.1_g330430 Hydrangea macrophylla HOM05D004654 ORTHO05D005414 7.1e-15 85.1 230 34.3
ECA246G3021 Erigeron canadensis HOM05D004654 ORTHO05D005414 1.6e-14 84.0 205 38.5
HanXRQChr15g0486441 Helianthus annuus HOM05D004654 ORTHO05D005414 3.5e-14 82.8 173 38.7
Actinidia35698 Actinidia chinensis HOM05D004654 ORTHO05D005414 4.6e-14 82.4 214 34.1
FAN28G0174 Fragaria x ananassa HOM05D004654 ORTHO05D005414 6.0e-14 82.0 204 34.8
FAN28G0874 Fragaria x ananassa HOM05D004654 ORTHO05D005414 6.0e-14 82.0 204 34.8
FAN26G0407 Fragaria x ananassa HOM05D004654 ORTHO05D005414 2.3e-13 80.1 202 35.1
FAN19G2236 Fragaria x ananassa HOM05D004654 ORTHO05D005414 3.0e-13 79.7 204 34.3
Ciclev10012875m.g Citrus clementina HOM05D004654 ORTHO05D005414 5.1e-13 79.0 209 34.0
Aqoxy5G02573 Aquilegia oxysepala HOM05D004654 ORTHO05D005414 6.7e-13 78.6 238 33.2
Hma1.2p1_0034F.1_g021540 Hydrangea macrophylla HOM05D004654 ORTHO05D005414 2.5e-12 76.6 215 32.6
Aa31LG2G2610 Aethionema arabicum HOM05D004654 ORTHO05D005414 3.3e-12 76.3 202 37.1
unitig_85.g27201 Utricularia gibba HOM05D004654 ORTHO05D005414 5.6e-12 75.5 107 42.1
Atru.chr1.2194 Acer truncatum HOM05D004654 ORTHO05D005414 7.4e-12 75.1 199 36.7
Dinv19105 Davidia involucrata HOM05D004654 ORTHO05D005414 1.3e-11 74.3 153 40.5
Glyma.18G046900 Glycine max HOM05D004654 ORTHO05D005414 1.3e-11 74.3 195 37.4
VMungo0540G1596 Vigna mungo HOM05D004654 ORTHO05D005414 1.3e-11 74.3 209 36.4
BolC6t39010H Brassica oleracea HOM05D004654 ORTHO05D005414 2.8e-11 73.2 198 35.4
Potri.017G142100 Populus trichocarpa HOM05D004654 ORTHO05D005414 2.8e-11 73.2 195 35.9
A07p32950 Brassica napus HOM05D004654 ORTHO05D005414 3.6e-11 72.8 202 35.1
QL02p054970 Quercus lobata HOM05D004654 ORTHO05D005414 4.8e-11 72.4 197 38.6
C06p39170 Brassica napus HOM05D004654 ORTHO05D005414 6.2e-11 72.0 202 34.7
BraA07t30922Z Brassica rapa HOM05D004654 ORTHO05D005414 6.2e-11 72.0 202 35.6
Thhalv10019176m.g Eutrema salsugineum HOM05D004654 ORTHO05D005414 6.2e-11 72.0 219 34.7
PGR004G1881 Punica granatum HOM05D004654 ORTHO05D005414 6.2e-11 72.0 197 34.5
QL02p056026 Quercus lobata HOM05D004654 ORTHO05D005414 6.2e-11 72.0 209 37.8
Cfa008008 Carpinus fangiana HOM05D004654 ORTHO05D005414 1.8e-10 70.5 92 56.5
Medtr3g064040 Medicago truncatula HOM05D004654 ORTHO05D005414 2.4e-10 70.1 95 47.4
Phvul.006G084100 Phaseolus vulgaris HOM05D004654 ORTHO05D005414 2.4e-10 70.1 197 37.1
Carub.0002s1154 Capsella rubella HOM05D004654 ORTHO05D005414 3.1e-10 69.7 189 35.4
Sabra17G0119000 Salix brachista HOM05D004654 ORTHO05D005414 5.3e-10 68.9 196 33.7
THA.LOC104805666 Tarenaya hassleriana HOM05D004654 ORTHO05D005414 5.3e-10 68.9 194 35.6
THA.LOC104822158 Tarenaya hassleriana HOM05D004654 ORTHO05D005414 5.3e-10 68.9 197 35.5
THA.LOC104823831 Tarenaya hassleriana HOM05D004654 ORTHO05D005414 5.3e-10 68.9 193 34.7
Ah.04g162850 Amaranthus hybridus HOM05D004654 ORTHO05D005414 6.9e-10 68.6 228 34.6
EL10Ac4g08895 Beta vulgaris HOM05D004654 ORTHO05D005414 9.0e-10 68.2 109 44.0
CARHR057580 Cardamine hirsuta HOM05D004654 ORTHO05D005414 9.0e-10 68.2 198 31.8
Glyma.11G204100 Glycine max HOM05D004654 ORTHO05D005414 9.0e-10 68.2 215 36.3
Sabra04G0052000 Salix brachista HOM05D004654 ORTHO05D005414 9.0e-10 68.2 166 36.7
Sp5g20670 Schrenkiella parvula HOM05D004654 ORTHO05D005414 1.2e-09 67.8 197 33.5
Gohir.A08G038100 Gossypium hirsutum HOM05D004654 ORTHO05D005414 1.5e-09 67.4 198 31.8
Prupe.3G011600 Prunus persica HOM05D004654 ORTHO05D005414 2.6e-09 66.6 220 32.3
PSO782G3544 Papaver somniferum HOM05D004654 ORTHO05D005414 3.4e-09 66.2 221 33.9
Eucgr.F02926 Eucalyptus grandis HOM05D004654 ORTHO05D005414 4.5e-09 65.9 220 33.2
Lalb_Chr17g0345801 Lupinus albus HOM05D004654 ORTHO05D005414 4.5e-09 65.9 211 31.8
CiPaw.03G008900 Carya illinoinensis HOM05D004654 ORTHO05D005414 5.8e-09 65.5 205 33.2
Haze_14051 Corylus avellana HOM05D004654 ORTHO05D005414 5.8e-09 65.5 222 37.8
FAN23G2643 Fragaria x ananassa HOM05D004654 ORTHO05D005414 5.8e-09 65.5 162 34.0
Gohir.D08G048300 Gossypium hirsutum HOM05D004654 ORTHO05D005414 5.8e-09 65.5 198 31.8
Gorai.004G047800 Gossypium raimondii HOM05D004654 ORTHO05D005414 5.8e-09 65.5 198 31.8
arahy.Tifrunner.gnm1.ann1.C1RHT9 Arachis hypogaea HOM05D004654 ORTHO05D005414 7.6e-09 65.1 107 42.1
Psat5g143960 Pisum sativum HOM05D004654 ORTHO05D005414 7.6e-09 65.1 225 32.4
PSO566G0049 Papaver somniferum HOM05D004654 ORTHO05D005414 9.9e-09 64.7 223 32.7
PSO566G0349 Papaver somniferum HOM05D004654 ORTHO05D005414 9.9e-09 64.7 223 32.7
CiPaw.03G260700 Carya illinoinensis HOM05D004654 ORTHO05D005414 1.7e-08 63.9 75 56.0
AUR62004739 Chenopodium quinoa HOM05D004654 ORTHO05D005414 1.7e-08 63.9 206 35.0
Potri.004G078500 Populus trichocarpa HOM05D004654 ORTHO05D005414 1.7e-08 63.9 191 32.5
CANSAT78G0950 Cannabis sativa HOM05D004654 ORTHO05D005414 2.2e-08 63.5 209 33.0
MD09G1282600 Malus domestica HOM05D004654 ORTHO05D005414 2.2e-08 63.5 219 34.2
BcaC03g14719 Brassica carinata HOM05D004654 ORTHO05D005414 2.9e-08 63.2 70 50.0
C02p21610 Brassica napus HOM05D004654 ORTHO05D005414 2.9e-08 63.2 70 50.0
BolC2t08298H Brassica oleracea HOM05D004654 ORTHO05D005414 2.9e-08 63.2 70 50.0
AUR62037512 Chenopodium quinoa HOM05D004654 ORTHO05D005414 2.9e-08 63.2 164 35.4
AL2G22850 Arabidopsis lyrata HOM05D004654 ORTHO05D005414 3.8e-08 62.8 94 43.6
AT1G65720 Arabidopsis thaliana HOM05D004654 ORTHO05D005414 3.8e-08 62.8 189 36.5
CiPaw.13G067300 Carya illinoinensis HOM05D004654 ORTHO05D005414 4.9e-08 62.4 203 29.6
Duzib138G0480 Durio zibethinus HOM05D004654 ORTHO05D005414 6.4e-08 62.0 214 32.2
CiPaw.07G102900 Carya illinoinensis HOM05D004654 ORTHO05D005414 8.4e-08 61.6 215 29.8
CDE07G1822 Ceratophyllum demersum HOM05D004654 ORTHO05D005414 1.1e-07 61.2 76 44.7
Sc09g0004620 Simmondsia chinensis HOM05D004654 ORTHO05D005414 1.1e-07 61.2 171 36.3
Gorai.008G054900 Gossypium raimondii HOM05D004654 ORTHO05D005414 1.4e-07 60.8 200 33.0
TPR.G37307 Trifolium pratense HOM05D004654 ORTHO05D005414 1.4e-07 60.8 196 32.1
GSVIVG01005258001 Vitis vinifera HOM05D004654 ORTHO05D005414 1.4e-07 60.8 211 31.3
Ca_15106_v3 Cicer arietinum L. HOM05D004654 ORTHO05D005414 1.9e-07 60.5 133 37.6
COL.COLO4_00809 Corchorus olitorius HOM05D004654 ORTHO05D005414 1.9e-07 60.5 211 30.8
Gohir.D12G051600 Gossypium hirsutum HOM05D004654 ORTHO05D005414 1.9e-07 60.5 200 33.0
arahy.Tifrunner.gnm1.ann1.RSI5EI Arachis hypogaea HOM05D004654 ORTHO05D005414 2.4e-07 60.1 212 28.8
Os03g0110300 Oryza sativa ssp. japonica HOM05D004654 ORTHO05D005414 2.4e-07 60.1 82 45.1
TAR374G0741 Trochodendron aralioides HOM05D004654 ORTHO05D005414 3.2e-07 59.7 167 36.5
ClCG05G011320 Citrullus lanatus HOM05D004654 ORTHO05D005414 5.5e-07 58.9 164 32.9
DCAR_000947 Daucus carota HOM05D004654 ORTHO05D005414 5.5e-07 58.9 65 40.0
Gohir.A12G053100 Gossypium hirsutum HOM05D004654 ORTHO05D005414 5.5e-07 58.9 200 32.5
Zm00001eb000770 Zea mays HOM05D004654 ORTHO05D005414 7.1e-07 58.5 84 41.7
Lj5C23T4 Lonicera japonica HOM05D004654 ORTHO05D005414 9.3e-07 58.2 59 52.5
HPP92_022519 Vanilla planifolia HOM05D004654 ORTHO05D005414 9.3e-07 58.2 78 44.9
MELO3C020251.2 Cucumis melo HOM05D004654 ORTHO05D005414 1.2e-06 57.8 80 45.0
CsaV3_3G021140 Cucumis sativus L. HOM05D004654 ORTHO05D005414 1.2e-06 57.8 80 45.0
A02p13350 Brassica napus HOM05D004654 ORTHO05D005414 1.6e-06 57.4 67 47.8
BraA02t06392Z Brassica rapa HOM05D004654 ORTHO05D005414 1.6e-06 57.4 67 47.8
CDE04G3704 Ceratophyllum demersum HOM05D004654 ORTHO05D005414 1.6e-06 57.4 48 58.3
Gohir.A04G103050 Gossypium hirsutum HOM05D004654 ORTHO05D005414 2.1e-06 57.0 64 46.9
Lj6g0008387 Lotus japonicus HOM05D004654 ORTHO05D005414 2.1e-06 57.0 197 32.0
MBI03_g34062_MAGBIO Magnolia biondii HOM05D004654 ORTHO05D005414 2.1e-06 57.0 206 31.1
MBI06_g28670_MAGBIO Magnolia biondii HOM05D004654 ORTHO05D005414 2.1e-06 57.0 214 31.3
Os10g0483900 Oryza sativa ssp. japonica HOM05D004654 ORTHO05D005414 2.7e-06 56.6 75 44.0
Thecc.04G056200 Theobroma cacao HOM05D004654 ORTHO05D005414 2.7e-06 56.6 197 29.9
TAR622G1006 Trochodendron aralioides HOM05D004654 ORTHO05D005414 3.5e-06 56.2 157 33.8
DCAR_014130 Daucus carota HOM05D004654 ORTHO05D005414 6.0e-06 55.5 173 32.9
Lalb_Chr10g0103991 Lupinus albus HOM05D004654 ORTHO05D005414 7.9e-06 55.1 38 65.8
MD17G1272400 Malus domestica HOM05D004654 ORTHO05D005414 7.9e-06 55.1 219 31.5


User provided reference genes

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