Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0003015g0090 Nicotiana tabacum HOM05D005438 ORTHO05D006744 1.8e-204 715.7 368 100.0
Nitab4.5_0007906g0070 Nicotiana tabacum HOM05D005438 ORTHO05D006744 7.0e-188 660.6 368 93.8
PGSC0003DMG400012320 Solanum tuberosum HOM05D005438 ORTHO05D006744 3.0e-183 645.2 363 90.9
CAN.G532.38 Capsicum annuum HOM05D005438 ORTHO05D006744 4.1e-180 634.8 363 90.6
Solyc08g081580.4 Solanum lycopersicum HOM05D005438 ORTHO05D006744 2.0e-179 632.5 363 90.1
Sopen08g029890 Solanum pennellii HOM05D005438 ORTHO05D006744 2.5e-177 625.5 363 89.0
Peaxi162Scf00074g01737 Petunia axillaris HOM05D005438 ORTHO05D006744 2.6e-174 615.5 366 87.4
Gohir.D03G078500 Gossypium hirsutum HOM05D005438 ORTHO05D006744 1.8e-119 433.3 369 65.6
GSVIVG01019417001 Vitis vinifera HOM05D005438 ORTHO05D006744 2.4e-119 433.0 373 64.6
Gohir.A02G105300 Gossypium hirsutum HOM05D005438 ORTHO05D006744 9.0e-119 431.0 369 65.6
COL.COLO4_08362 Corchorus olitorius HOM05D005438 ORTHO05D006744 1.5e-118 430.3 374 63.4
Gorai.003G085600 Gossypium raimondii HOM05D005438 ORTHO05D006744 1.5e-118 430.3 370 65.7
Dinv37597 Davidia involucrata HOM05D005438 ORTHO05D006744 2.0e-118 429.9 376 64.4
Actinidia10609 Actinidia chinensis HOM05D005438 ORTHO05D006744 4.5e-118 428.7 378 63.2
Thecc.03G286500 Theobroma cacao HOM05D005438 ORTHO05D006744 5.0e-117 425.2 372 64.0
TAR374G1319 Trochodendron aralioides HOM05D005438 ORTHO05D006744 2.7e-115 419.5 371 62.8
Rhsim02G0235700 Rhododendron simsii HOM05D005438 ORTHO05D006744 4.6e-115 418.7 373 62.7
arahy.Tifrunner.gnm1.ann1.Y7QUAU Arachis hypogaea HOM05D005438 ORTHO05D006744 6.1e-115 418.3 364 61.8
Duzib084G0802 Durio zibethinus HOM05D005438 ORTHO05D006744 7.9e-115 417.9 369 61.5
Cc08_g15250 Coffea canephora HOM05D005438 ORTHO05D006744 1.1e-113 414.1 379 61.2
CiPaw.11G129800 Carya illinoinensis HOM05D005438 ORTHO05D006744 1.5e-113 413.7 368 60.1
arahy.Tifrunner.gnm1.ann1.I29YTG Arachis hypogaea HOM05D005438 ORTHO05D006744 1.9e-113 413.3 364 61.8
Phvul.002G293100 Phaseolus vulgaris HOM05D005438 ORTHO05D006744 2.2e-112 409.8 370 60.0
Gorai.008G250200 Gossypium raimondii HOM05D005438 ORTHO05D006744 2.8e-112 409.5 378 61.1
QL12p031793 Quercus lobata HOM05D005438 ORTHO05D006744 4.8e-112 408.7 409 57.0
VMungo0251G0328 Vigna mungo HOM05D005438 ORTHO05D006744 4.8e-112 408.7 373 60.6
CsaV3_5G002390 Cucumis sativus L. HOM05D005438 ORTHO05D006744 6.3e-112 408.3 374 60.7
Gohir.D12G233900 Gossypium hirsutum HOM05D005438 ORTHO05D006744 1.1e-111 407.5 378 60.1
RcHm_v2.0_Chr7g0196591 Rosa chinensis HOM05D005438 ORTHO05D006744 1.1e-111 407.5 373 60.9
CSS0046697 Camellia sinensis var. sinensis HOM05D005438 ORTHO05D006744 1.8e-111 406.8 373 60.9
Duzib205G0010 Durio zibethinus HOM05D005438 ORTHO05D006744 1.8e-111 406.8 371 61.5
Migut.J01399 Erythranthe guttata HOM05D005438 ORTHO05D006744 1.8e-111 406.8 372 61.0
FAN08G1515 Fragaria x ananassa HOM05D005438 ORTHO05D006744 1.8e-111 406.8 373 61.1
DCAR_004611 Daucus carota HOM05D005438 ORTHO05D006744 2.4e-111 406.4 369 60.4
MD14G1111900 Malus domestica HOM05D005438 ORTHO05D006744 3.1e-111 406.0 372 59.9
Atru.chr9.2115 Acer truncatum HOM05D005438 ORTHO05D006744 5.3e-111 405.2 380 60.0
Ca_10950_v3 Cicer arietinum L. HOM05D005438 ORTHO05D006744 5.3e-111 405.2 375 60.3
Prupe.5G106500 Prunus persica HOM05D005438 ORTHO05D006744 9.1e-111 404.4 373 59.0
MELO3C005715.2 Cucumis melo HOM05D005438 ORTHO05D006744 2.6e-110 402.9 373 59.8
Eucgr.D01812 Eucalyptus grandis HOM05D005438 ORTHO05D006744 2.6e-110 402.9 367 61.6
Eucgr.L02379 Eucalyptus grandis HOM05D005438 ORTHO05D006744 2.6e-110 402.9 367 61.6
FAN18G2027 Fragaria x ananassa HOM05D005438 ORTHO05D006744 3.4e-110 402.5 371 61.2
Glyma.05G211800 Glycine max HOM05D005438 ORTHO05D006744 3.4e-110 402.5 373 60.6
FvH4_5g03190 Fragaria vesca HOM05D005438 ORTHO05D006744 4.5e-110 402.1 371 61.2
FAN04G0810 Fragaria x ananassa HOM05D005438 ORTHO05D006744 5.9e-110 401.7 374 61.0
vmacro11410 Vaccinium macrocarpon HOM05D005438 ORTHO05D006744 1.0e-109 401.0 370 61.4
FAN13G0364 Fragaria x ananassa HOM05D005438 ORTHO05D006744 1.3e-109 400.6 371 60.6
Glyma.08G018100 Glycine max HOM05D005438 ORTHO05D006744 2.2e-109 399.8 372 61.3
Nn1g01673 Nelumbo nucifera HOM05D005438 ORTHO05D006744 5.0e-109 398.7 395 58.2
CANSAT21G0041 Cannabis sativa HOM05D005438 ORTHO05D006744 1.4e-108 397.1 377 58.9
Ciclev10020644m.g Citrus clementina HOM05D005438 ORTHO05D006744 2.5e-108 396.4 382 58.9
Lj4g0011941 Lotus japonicus HOM05D005438 ORTHO05D006744 3.2e-108 396.0 383 59.3
Psat7g029680 Pisum sativum HOM05D005438 ORTHO05D006744 5.5e-108 395.2 373 60.1
TWI60G1446 Tripterygium wilfordii HOM05D005438 ORTHO05D006744 1.6e-107 393.7 383 58.7
Lalb_Chr05g0224491 Lupinus albus HOM05D005438 ORTHO05D006744 2.7e-107 392.9 370 60.0
Manes.01G057900 Manihot esculenta HOM05D005438 ORTHO05D006744 1.0e-106 391.0 409 57.0
Sed0027839 Sechium edule HOM05D005438 ORTHO05D006744 3.0e-106 389.4 370 59.7
Medtr8g098940 Medicago truncatula HOM05D005438 ORTHO05D006744 8.8e-106 387.9 374 61.0
ECA233G5263 Erigeron canadensis HOM05D005438 ORTHO05D006744 1.3e-104 384.0 376 58.8
HanXRQChr02g0049721 Helianthus annuus HOM05D005438 ORTHO05D006744 2.8e-104 382.9 370 58.4
PGR031G2565 Punica granatum HOM05D005438 ORTHO05D006744 3.7e-104 382.5 375 57.9
Atru.BG.199.p Acer truncatum HOM05D005438 ORTHO05D006744 1.1e-103 380.9 368 57.9
Hund11433 Selenicereus undatus HOM05D005438 ORTHO05D006744 1.4e-103 380.6 376 58.0
ClCG01G002320 Citrullus lanatus HOM05D005438 ORTHO05D006744 1.5e-102 377.1 369 57.5
Lj2C178T12 Lonicera japonica HOM05D005438 ORTHO05D006744 2.0e-102 376.7 376 57.2
TPR.G12953 Trifolium pratense HOM05D005438 ORTHO05D006744 2.0e-102 376.7 373 59.2
SGA_v2.0_scaffold173G39139 Striga asiatica HOM05D005438 ORTHO05D006744 4.5e-102 375.6 394 55.3
AUR62019752 Chenopodium quinoa HOM05D005438 ORTHO05D006744 1.7e-101 373.6 369 57.2
Migut.A00720 Erythranthe guttata HOM05D005438 ORTHO05D006744 1.7e-101 373.6 372 57.0
MBI11_g09068_MAGBIO Magnolia biondii HOM05D005438 ORTHO05D006744 6.5e-101 371.7 355 58.9
Potri.003G132600 Populus trichocarpa HOM05D005438 ORTHO05D006744 1.2e-99 367.5 415 51.1
Ah.12g051920 Amaranthus hybridus HOM05D005438 ORTHO05D006744 2.1e-99 366.7 384 55.5
Sabra03G0095000 Salix brachista HOM05D005438 ORTHO05D006744 2.1e-99 366.7 414 50.5
Lsat_1_v5_gn_3_8761 Lactuca sativa HOM05D005438 ORTHO05D006744 3.6e-99 365.9 366 57.9
Gohir.A12G233400 Gossypium hirsutum HOM05D005438 ORTHO05D006744 8.0e-99 364.8 377 57.6
AUR62010754 Chenopodium quinoa HOM05D005438 ORTHO05D006744 2.3e-98 363.2 374 55.9
Aqoxy7G00195 Aquilegia oxysepala HOM05D005438 ORTHO05D006744 1.5e-97 360.5 378 55.0
THA.LOC104817794 Tarenaya hassleriana HOM05D005438 ORTHO05D006744 4.4e-97 359.0 388 55.2
Aa31LG2G1070 Aethionema arabicum HOM05D005438 ORTHO05D006744 3.7e-96 355.9 390 54.4
EL10Ac5g12834 Beta vulgaris HOM05D005438 ORTHO05D006744 7.0e-95 351.7 349 56.4
BcaB07g31422 Brassica carinata HOM05D005438 ORTHO05D006744 1.2e-94 350.9 402 51.7
BcaB07g31532 Brassica carinata HOM05D005438 ORTHO05D006744 2.0e-94 350.1 408 52.5
CSS0015982 Camellia sinensis var. sinensis HOM05D005438 ORTHO05D006744 1.3e-93 347.4 368 57.6
A09p14060 Brassica napus HOM05D005438 ORTHO05D006744 2.2e-93 346.7 398 53.5
AL2G11130 Arabidopsis lyrata HOM05D005438 ORTHO05D006744 2.9e-93 346.3 396 53.0
Carub.0002s0086 Capsella rubella HOM05D005438 ORTHO05D006744 1.1e-92 344.4 394 53.3
Zm00001eb001860 Zea mays HOM05D005438 ORTHO05D006744 1.6e-91 340.5 385 53.2
AT1G63980 Arabidopsis thaliana HOM05D005438 ORTHO05D006744 2.1e-91 340.1 403 50.6
BcaC04g22661 Brassica carinata HOM05D005438 ORTHO05D006744 2.1e-91 340.1 405 52.1
Thhalv10023525m.g Eutrema salsugineum HOM05D005438 ORTHO05D006744 6.1e-91 338.6 394 52.5
Os03g0125300 Oryza sativa ssp. japonica HOM05D005438 ORTHO05D006744 2.3e-90 336.7 391 53.2
BraA09t37053Z Brassica rapa HOM05D005438 ORTHO05D006744 5.2e-90 335.5 405 52.6
CARHR047000 Cardamine hirsuta HOM05D005438 ORTHO05D006744 6.7e-90 335.1 400 51.2
A09p15160 Brassica napus HOM05D005438 ORTHO05D006744 1.5e-89 334.0 412 50.2
MD06G1091000 Malus domestica HOM05D005438 ORTHO05D006744 1.3e-88 330.9 369 52.0
C09p18360 Brassica napus HOM05D005438 ORTHO05D006744 3.7e-88 329.3 413 50.8
C09p16950 Brassica napus HOM05D005438 ORTHO05D006744 4.8e-88 328.9 410 51.7
PSO478G3903 Papaver somniferum HOM05D005438 ORTHO05D006744 4.8e-88 328.9 389 50.1
Sp2g00710 Schrenkiella parvula HOM05D005438 ORTHO05D006744 4.8e-88 328.9 417 49.6
BolC9t54592H Brassica oleracea HOM05D005438 ORTHO05D006744 1.4e-87 327.4 409 51.8
PSO017G3503 Papaver somniferum HOM05D005438 ORTHO05D006744 1.8e-87 327.0 397 50.4
ATR0661G541 Amborella trichopoda HOM05D005438 ORTHO05D006744 4.1e-87 325.9 397 50.1
BraA09t37158Z Brassica rapa HOM05D005438 ORTHO05D006744 4.1e-87 325.9 416 50.5
PSO266G0069 Papaver somniferum HOM05D005438 ORTHO05D006744 2.7e-86 323.2 391 50.4
BolC9t54729H Brassica oleracea HOM05D005438 ORTHO05D006744 5.9e-86 322.0 415 49.9
Sc01g0009850 Simmondsia chinensis HOM05D005438 ORTHO05D006744 1.3e-85 320.9 308 58.1
unitig_32.g10979 Utricularia gibba HOM05D005438 ORTHO05D006744 4.0e-82 309.3 329 55.0
HanXRQChr17g0533211 Helianthus annuus HOM05D005438 ORTHO05D006744 4.4e-81 305.8 358 52.8
CDE04G0809 Ceratophyllum demersum HOM05D005438 ORTHO05D006744 7.5e-81 305.1 369 49.9
HPP92_021018 Vanilla planifolia HOM05D005438 ORTHO05D006744 3.5e-78 296.2 377 51.2
SEGI_20773 Sequoiadendron giganteum HOM05D005438 ORTHO05D006744 2.3e-74 283.5 431 43.9
Haze_08758 Corylus avellana HOM05D005438 ORTHO05D006744 3.3e-68 263.1 278 55.4
SMO134G0098 Selaginella moellendorffii HOM05D005438 ORTHO05D006744 3.6e-51 206.5 364 38.5
Pp3c2_28530 Physcomitrium patens HOM05D005438 ORTHO05D006744 7.5e-49 198.7 407 36.4
Mapoly0090s0083 Marchantia polymorpha HOM05D005438 ORTHO05D006744 4.9e-48 196.1 488 33.4
SHI31900 Sapria himalayana HOM05D005438 ORTHO05D006744 2.7e-46 190.3 297 43.8
BcaC04g22519 Brassica carinata HOM05D005438 ORTHO05D006744 1.0e-45 188.3 286 44.8
Lsat_1_v5_gn_1_49360 Lactuca sativa HOM05D005438 ORTHO05D006744 4.7e-43 179.5 214 51.4
Lsat_1_v5_gn_5_103140 Lactuca sativa HOM05D005438 ORTHO05D006744 4.7e-43 179.5 214 51.4
Lsat_1_v5_gn_9_38321 Lactuca sativa HOM05D005438 ORTHO05D006744 4.7e-43 179.5 214 51.4
CSS0040427 Camellia sinensis var. sinensis HOM05D005438 ORTHO05D006744 6.8e-42 175.6 144 66.7
AagrBONN_evm.TU.Sc2ySwM_344.4712 Anthoceros agrestis HOM05D005438 ORTHO05D006744 6.4e-40 169.1 534 29.4
Actinidia28345 Actinidia chinensis HOM05D005438 ORTHO05D006744 3.5e-38 163.3 373 37.8
Cpa.g.sc631.4 Carica papaya HOM05D005438 ORTHO05D006744 4.3e-36 156.4 144 59.0
CDE12G0222 Ceratophyllum demersum HOM05D005438 ORTHO05D006744 3.2e-31 140.2 144 56.9
Pp3c7_27020 Physcomitrium patens HOM05D005438 ORTHO05D006744 1.7e-29 134.4 395 31.4
BcaNung05361 Brassica carinata HOM05D005438 ORTHO05D006744 7.3e-28 129.0 208 43.8
CBR_g35011 Chara braunii HOM05D005438 ORTHO05D006744 2.2e-24 117.5 331 32.3
Cpa.g.c39085 Carica papaya HOM05D005438 ORTHO05D006744 3.8e-24 116.7 133 48.1
ATR0661G444 Amborella trichopoda HOM05D005438 ORTHO05D006744 4.3e-20 103.2 190 37.4
Cre07.g347300 Chlamydomonas reinhardtii HOM05D005438 ORTHO05D021338 6.9e-18 95.9 377 27.9
Cre07.g347400 Chlamydomonas reinhardtii HOM05D005438 ORTHO05D006744 6.9e-18 95.9 377 27.9
ECA246G3112 Erigeron canadensis HOM05D005438 ORTHO05D006744 4.2e-15 86.7 84 54.8
HanXRQChr16g0521071 Helianthus annuus HOM05D005438 ORTHO05D006744 1.6e-11 74.7 42 83.3
AagrBONN_evm.TU.Sc2ySwM_344.4702 Anthoceros agrestis HOM05D005438 ORTHO05D006744 1.4e-07 61.6 130 33.8
ClCG01G002340 Citrullus lanatus HOM05D005438 ORTHO05D006744 3.2e-07 60.5 38 71.1
MCO11G547 Micromonas commoda HOM05D005438 ORTHO05D006744 9.3e-07 58.9 320 25.0
Cre01.g054000 Chlamydomonas reinhardtii HOM05D005438 ORTHO05D006744 3.5e-06 57.0 77 41.6


User provided reference genes

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