Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0003006g0030 Nicotiana tabacum HOM05D007030 ORTHO05D009159 1.3e-274 949.1 472 100.0
Nitab4.5_0001413g0070 Nicotiana tabacum HOM05D007030 ORTHO05D009159 2.6e-264 914.8 472 96.2
Sopen11g019320 Solanum pennellii HOM05D007030 ORTHO05D009159 6.6e-239 830.5 470 87.9
PGSC0003DMG400009584 Solanum tuberosum HOM05D007030 ORTHO05D009159 1.0e-236 823.2 470 87.4
CAN.G341.5 Capsicum annuum HOM05D007030 ORTHO05D009159 1.7e-223 779.2 506 79.8
Manes.04G085100 Manihot esculenta HOM05D007030 ORTHO05D009159 2.4e-212 742.3 460 78.5
Dinv23472 Davidia involucrata HOM05D007030 ORTHO05D009159 1.4e-209 733.0 459 78.4
vmacro02066 Vaccinium macrocarpon HOM05D007030 ORTHO05D009159 1.9e-209 732.6 422 82.9
Lj5A191G48 Lonicera japonica HOM05D007030 ORTHO05D009159 2.4e-209 732.3 461 78.3
Rhsim11G0182100 Rhododendron simsii HOM05D007030 ORTHO05D009159 9.2e-209 730.3 470 77.7
Oeu008578.1 Olea europaea HOM05D007030 ORTHO05D009159 3.5e-208 728.4 426 82.6
GSVIVG01024202001 Vitis vinifera HOM05D007030 ORTHO05D009159 2.3e-207 725.7 452 79.0
Potri.009G122300 Populus trichocarpa HOM05D007030 ORTHO05D009159 2.8e-205 718.8 459 76.7
CSS0044633 Camellia sinensis var. sinensis HOM05D007030 ORTHO05D009159 1.1e-204 716.8 461 77.4
Ciclev10028302m.g Citrus clementina HOM05D007030 ORTHO05D009159 9.0e-204 713.8 454 76.0
Cc02_g17050 Coffea canephora HOM05D007030 ORTHO05D009159 1.2e-203 713.4 426 81.0
Nn6g32211 Nelumbo nucifera HOM05D007030 ORTHO05D009159 2.6e-203 712.2 449 76.4
Prupe.8G087700 Prunus persica HOM05D007030 ORTHO05D009159 7.6e-203 710.7 421 81.0
RcHm_v2.0_Chr6g0267041 Rosa chinensis HOM05D007030 ORTHO05D009159 2.9e-202 708.8 426 79.8
Gohir.D13G029100 Gossypium hirsutum HOM05D007030 ORTHO05D009159 3.8e-202 708.4 423 79.4
MD10G1065800 Malus domestica HOM05D007030 ORTHO05D009159 3.8e-202 708.4 420 80.2
TWI31G0693 Tripterygium wilfordii HOM05D007030 ORTHO05D009159 6.4e-202 707.6 424 80.0
Migut.B00189 Erythranthe guttata HOM05D007030 ORTHO05D009159 1.1e-201 706.8 457 77.0
TAR381G1513 Trochodendron aralioides HOM05D007030 ORTHO05D009159 1.6e-200 703.0 426 79.8
FAN20G0390 Fragaria x ananassa HOM05D007030 ORTHO05D009159 2.1e-200 702.6 426 79.3
QL11p045675 Quercus lobata HOM05D007030 ORTHO05D009159 7.8e-200 700.7 443 77.0
Eucgr.I01312 Eucalyptus grandis HOM05D007030 ORTHO05D009159 1.3e-199 699.9 461 75.5
FAN15G3154 Fragaria x ananassa HOM05D007030 ORTHO05D009159 1.7e-199 699.5 426 78.9
CANSAT11G0427 Cannabis sativa HOM05D007030 ORTHO05D009159 1.9e-198 696.0 434 78.6
Haze_02305 Corylus avellana HOM05D007030 ORTHO05D009159 1.9e-198 696.0 479 72.7
ECA246G1002 Erigeron canadensis HOM05D007030 ORTHO05D009159 1.9e-198 696.0 427 78.0
Lj3g0022597 Lotus japonicus HOM05D007030 ORTHO05D009159 2.5e-198 695.7 463 73.4
FAN24G1057 Fragaria x ananassa HOM05D007030 ORTHO05D009159 4.3e-198 694.9 426 78.2
CsaV3_2G015180 Cucumis sativus L. HOM05D007030 ORTHO05D009159 7.3e-198 694.1 441 76.0
Gorai.013G033100 Gossypium raimondii HOM05D007030 ORTHO05D009159 1.3e-197 693.3 502 69.3
SalBow6G2462 Salvia bowleyana HOM05D007030 ORTHO05D009159 1.3e-197 693.3 462 73.8
CiPaw.05G072000 Carya illinoinensis HOM05D007030 ORTHO05D009159 1.6e-197 693.0 439 75.9
Cpa.g.sc150.40 Carica papaya HOM05D007030 ORTHO05D009159 4.8e-197 691.4 442 76.0
Lalb_Chr01g0002251 Lupinus albus HOM05D007030 ORTHO05D009159 4.8e-197 691.4 421 78.6
PGR142G2744 Punica granatum HOM05D007030 ORTHO05D009159 4.8e-197 691.4 449 74.6
DCAR_022800 Daucus carota HOM05D007030 ORTHO05D009159 3.1e-196 688.7 435 75.6
MBI05_g05431_MAGBIO Magnolia biondii HOM05D007030 ORTHO05D009159 3.1e-196 688.7 452 75.2
THA.LOC104824797 Tarenaya hassleriana HOM05D007030 ORTHO05D009159 2.0e-195 686.0 427 75.6
HanXRQChr15g0479121 Helianthus annuus HOM05D007030 ORTHO05D009159 2.6e-195 685.6 457 73.3
Hund06268 Selenicereus undatus HOM05D007030 ORTHO05D009159 4.5e-195 684.9 471 71.1
Gohir.A13G031100 Gossypium hirsutum HOM05D007030 ORTHO05D009159 5.8e-195 684.5 423 78.3
BcaNung06994 Brassica carinata HOM05D007030 ORTHO05D009159 2.2e-194 682.6 420 76.4
Aqoxy5G01506 Aquilegia oxysepala HOM05D007030 ORTHO05D009159 2.9e-194 682.2 423 78.3
Sp4g00540 Schrenkiella parvula HOM05D007030 ORTHO05D009159 2.9e-194 682.2 420 76.4
Phvul.011G040600 Phaseolus vulgaris HOM05D007030 ORTHO05D009159 8.4e-194 680.6 418 78.0
Thhalv10000118m.g Eutrema salsugineum HOM05D007030 ORTHO05D009159 1.4e-193 679.9 419 77.1
AL4G10540 Arabidopsis lyrata HOM05D007030 ORTHO05D009159 3.2e-193 678.7 443 73.4
BraA09t41218Z Brassica rapa HOM05D007030 ORTHO05D009159 3.2e-193 678.7 420 76.4
Medtr4g071230 Medicago truncatula HOM05D007030 ORTHO05D009159 3.2e-193 678.7 421 77.2
Glyma.11G112600 Glycine max HOM05D007030 ORTHO05D009159 5.4e-193 677.9 469 71.0
BcaNung06382 Brassica carinata HOM05D007030 ORTHO05D009159 1.2e-192 676.8 454 72.2
C08p41600 Brassica napus HOM05D007030 ORTHO05D009159 6.0e-192 674.5 454 72.0
BolC8t51722H Brassica oleracea HOM05D007030 ORTHO05D009159 2.3e-191 672.5 454 71.8
arahy.Tifrunner.gnm1.ann1.X71KKA Arachis hypogaea HOM05D007030 ORTHO05D009159 2.8e-189 665.6 464 70.3
EL10Ac9g21613 Beta vulgaris HOM05D007030 ORTHO05D009159 2.4e-188 662.5 424 75.0
AUR62010413 Chenopodium quinoa HOM05D007030 ORTHO05D009159 3.4e-187 658.7 422 75.4
COL.COLO4_26024 Corchorus olitorius HOM05D007030 ORTHO05D009159 3.2e-185 652.1 453 70.6
ClCG11G003990 Citrullus lanatus HOM05D007030 ORTHO05D009159 1.8e-183 646.4 480 68.3
Actinidia11760 Actinidia chinensis HOM05D007030 ORTHO05D009159 6.2e-181 637.9 435 74.0
Ca_20921_v3 Cicer arietinum L. HOM05D007030 ORTHO05D009159 1.8e-180 636.3 421 73.6
Sed0020159 Sechium edule HOM05D007030 ORTHO05D009159 2.6e-179 632.5 382 79.3
FvH4_2g10090 Fragaria vesca HOM05D007030 ORTHO05D009159 3.4e-179 632.1 378 80.2
SGA_v2.0_scaffold58G20475 Striga asiatica HOM05D007030 ORTHO05D009159 3.4e-179 632.1 427 73.3
CARHR112250 Cardamine hirsuta HOM05D007030 ORTHO05D009159 3.8e-178 628.6 383 77.5
arahy.Tifrunner.gnm1.ann1.EU2PQ7 Arachis hypogaea HOM05D007030 ORTHO05D009159 2.5e-177 625.9 476 66.6
MELO3C023343.2 Cucumis melo HOM05D007030 ORTHO05D009159 2.5e-177 625.9 381 78.5
Lsat_1_v5_gn_3_43860 Lactuca sativa HOM05D007030 ORTHO05D009159 2.5e-177 625.9 457 68.3
Thecc.02G077800 Theobroma cacao HOM05D007030 ORTHO05D009159 5.5e-177 624.8 380 78.2
Hma1.2p1_0851F.1_g228290 Hydrangea macrophylla HOM05D007030 ORTHO05D009159 1.1e-174 617.1 426 74.4
Carub.0004s0040 Capsella rubella HOM05D007030 ORTHO05D009159 3.3e-174 615.5 383 76.5
AT2G21370 Arabidopsis thaliana HOM05D007030 ORTHO05D009159 2.2e-173 612.8 379 75.7
PSO210G4381 Papaver somniferum HOM05D007030 ORTHO05D009159 7.2e-169 597.8 419 69.7
Atru.chr5.3113 Acer truncatum HOM05D007030 ORTHO05D009159 1.5e-166 590.1 342 82.5
TPR.G16229 Trifolium pratense HOM05D007030 ORTHO05D009159 1.7e-165 586.6 386 73.1
ATR0661G201 Amborella trichopoda HOM05D007030 ORTHO05D009159 2.4e-164 582.8 429 67.8
Psat7g182480 Pisum sativum HOM05D007030 ORTHO05D009159 3.1e-164 582.4 360 76.7
AUR62016803 Chenopodium quinoa HOM05D007030 ORTHO05D009159 2.9e-162 575.9 424 68.4
VMungo1127G1504 Vigna mungo HOM05D007030 ORTHO05D009159 2.1e-160 569.7 419 67.5
Mapoly0010s0072 Marchantia polymorpha HOM05D007030 ORTHO05D009159 1.1e-156 557.4 419 64.0
Aa31LG7G15160 Aethionema arabicum HOM05D007030 ORTHO05D009159 5.0e-154 548.5 350 75.7
Zm00001eb094750 Zea mays HOM05D007030 ORTHO05D009159 1.1e-153 547.4 421 64.8
SMO115G0266 Selaginella moellendorffii HOM05D007030 ORTHO05D009159 1.9e-153 546.6 419 62.8
Duzib052G0475 Durio zibethinus HOM05D007030 ORTHO05D009159 1.0e-151 540.8 442 62.4
Sc14g0001940 Simmondsia chinensis HOM05D007030 ORTHO05D009159 1.9e-145 520.0 314 79.6
BcaNung06381 Brassica carinata HOM05D007030 ORTHO05D009159 4.2e-145 518.8 326 75.2
Peaxi162Scf00684g00133 Petunia axillaris HOM05D007030 ORTHO05D009159 3.7e-141 505.8 304 85.2
unitig_744.g24262 Utricularia gibba HOM05D007030 ORTHO05D009159 2.1e-136 490.0 449 57.5
CDE09G0328 Ceratophyllum demersum HOM05D007030 ORTHO05D009159 3.3e-129 466.1 428 56.8
Cre02.g098150 Chlamydomonas reinhardtii HOM05D007030 ORTHO05D009159 1.7e-117 427.2 460 48.9
Os07g0409200 Oryza sativa ssp. japonica HOM05D007030 ORTHO05D009159 2.4e-108 396.7 246 77.2
Solyc11g042950.1 Solanum lycopersicum HOM05D007030 ORTHO05D009159 2.1e-104 383.6 202 91.1
MCO15G291 Micromonas commoda HOM05D007030 ORTHO05D009159 2.7e-99 366.7 436 47.0
Haze_02254 Corylus avellana HOM05D007030 ORTHO05D009159 2.7e-91 340.1 320 58.4
Haze_02264 Corylus avellana HOM05D007030 ORTHO05D009159 1.0e-90 338.2 320 58.4
AagrBONN_evm.TU.Sc2ySwM_117.2558 Anthoceros agrestis HOM05D007030 ORTHO05D009159 1.7e-85 320.9 275 57.5
RcHm_v2.0_Chr4g0423361 Rosa chinensis HOM05D007030 ORTHO05D009159 8.1e-80 302.0 225 70.2
Haze_02269 Corylus avellana HOM05D007030 ORTHO05D009159 3.5e-75 286.6 211 68.7
THA.LOC104804536 Tarenaya hassleriana HOM05D007030 ORTHO05D009159 1.5e-70 271.2 179 73.2
RcHm_v2.0_Chr3g0496591 Rosa chinensis HOM05D007030 ORTHO05D009159 5.8e-62 242.7 309 48.2
PRCOL_00006836 Prasinoderma coloniale HOM05D007030 ORTHO05D009159 1.0e-61 241.9 437 40.0
TPR.G30522 Trifolium pratense HOM05D007030 ORTHO05D000007 8.7e-58 228.8 164 68.3
PGSC0003DMG400009674 Solanum tuberosum HOM05D007030 ORTHO05D028676 1.2e-38 165.2 85 92.9
arahy.Tifrunner.gnm1.ann1.L6T79S Arachis hypogaea HOM05D007030 ORTHO05D009159 1.2e-35 155.2 93 79.6
THA.LOC104804117 Tarenaya hassleriana HOM05D007030 ORTHO05D009159 1.2e-35 155.2 105 66.7
Glyma.12G038500 Glycine max HOM05D007030 ORTHO05D028676 1.9e-28 131.3 91 72.5
CDE09G1160 Ceratophyllum demersum HOM05D007030 ORTHO05D028676 6.3e-16 89.7 67 64.2
QL11p045724 Quercus lobata HOM05D007030 ORTHO05D028676 4.7e-11 73.6 43 81.4
Aa31LG7G15150 Aethionema arabicum HOM05D007030 ORTHO05D009159 2.4e-07 61.2 50 58.0
AagrBONN_evm.TU.Sc2ySwM_228.1076 Anthoceros agrestis HOM05D001656 ORTHO05D005043 4.1e-07 60.5 240 23.8


User provided reference genes

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