Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0002986g0040 Nicotiana tabacum HOM05D008610 ORTHO05D010832 1.4e-105 386.3 200 100.0
Nitab4.5_0000829g0060 Nicotiana tabacum HOM05D008610 ORTHO05D010832 5.8e-96 354.4 204 91.7
CAN.G556.6 Capsicum annuum HOM05D008610 ORTHO05D010832 3.9e-68 261.9 201 70.1
Solyc01g067340.3 Solanum lycopersicum HOM05D008610 ORTHO05D010832 1.6e-64 250.0 198 68.7
Peaxi162Scf00386g00922 Petunia axillaris HOM05D008610 ORTHO05D010832 2.6e-64 249.2 202 68.8
Sopen01g029220 Solanum pennellii HOM05D008610 ORTHO05D010832 2.0e-51 206.5 166 68.1
Thecc.04G278400 Theobroma cacao HOM05D008610 ORTHO05D010832 2.5e-30 136.3 202 41.6
Duzib151G0343 Durio zibethinus HOM05D008610 ORTHO05D010832 2.3e-28 129.8 204 42.6
CSS0018848 Camellia sinensis var. sinensis HOM05D008610 ORTHO05D010832 4.4e-27 125.6 202 43.6
COL.COLO4_13922 Corchorus olitorius HOM05D008610 ORTHO05D010832 3.7e-26 122.5 206 39.3
TAR362G0442 Trochodendron aralioides HOM05D008610 ORTHO05D010832 3.2e-25 119.4 205 38.0
QL06p007560 Quercus lobata HOM05D008610 ORTHO05D010832 7.0e-25 118.2 202 41.1
Migut.G00203 Erythranthe guttata HOM05D008610 ORTHO05D010832 5.0e-23 112.1 201 36.3
Rhsim02G0012900 Rhododendron simsii HOM05D008610 ORTHO05D010832 2.5e-22 109.8 171 46.8
Dinv44421 Davidia involucrata HOM05D008610 ORTHO05D010832 1.6e-21 107.1 148 45.9
SGA_v2.0_scaffold57G20206 Striga asiatica HOM05D008610 ORTHO05D010832 2.3e-20 103.2 189 36.0
Nn4g26013 Nelumbo nucifera HOM05D008610 ORTHO05D010832 3.1e-20 102.8 200 37.5
Phvul.003G101300 Phaseolus vulgaris HOM05D008610 ORTHO05D010832 1.5e-19 100.5 156 41.7
Hma1.2p1_0823F.1_g224690 Hydrangea macrophylla HOM05D008610 ORTHO05D010832 3.4e-19 99.4 203 37.9
TPR.G28783 Trifolium pratense HOM05D008610 ORTHO05D010832 3.4e-19 99.4 172 39.0
unitig_748.g8579 Utricularia gibba HOM05D008610 ORTHO05D010832 7.5e-19 98.2 199 34.2
CANSAT78G1094 Cannabis sativa HOM05D008610 ORTHO05D010832 1.3e-18 97.4 213 35.2
TWI09G0412 Tripterygium wilfordii HOM05D008610 ORTHO05D010832 4.9e-18 95.5 209 36.4
Glyma.07G251100 Glycine max HOM05D008610 ORTHO05D010832 1.9e-17 93.6 157 43.3
VMungo1215G1271 Vigna mungo HOM05D008610 ORTHO05D010832 5.4e-17 92.0 156 39.7
Glyma.17G023200 Glycine max HOM05D008610 ORTHO05D010832 1.6e-16 90.5 155 40.0
Ca_21546_v3 Cicer arietinum L. HOM05D008610 ORTHO05D010832 4.6e-16 89.0 161 43.5
DCAR_027105 Daucus carota HOM05D008610 ORTHO05D010832 1.3e-15 87.4 153 37.9
Psat4g226320 Pisum sativum HOM05D008610 ORTHO05D010832 3.9e-15 85.9 184 37.5
Sed0011065 Sechium edule HOM05D008610 ORTHO05D010832 1.5e-14 84.0 169 34.3
Lj4g0020809 Lotus japonicus HOM05D008610 ORTHO05D010832 7.3e-14 81.6 160 40.6
ClCG05G005840 Citrullus lanatus HOM05D008610 ORTHO05D010832 1.2e-13 80.9 156 36.5
Actinidia23424 Actinidia chinensis HOM05D008610 ORTHO05D010832 2.1e-13 80.1 206 34.5
Medtr4g118830 Medicago truncatula HOM05D008610 ORTHO05D010832 2.8e-13 79.7 178 36.5
CsaV3_3G014190 Cucumis sativus L. HOM05D008610 ORTHO05D010832 1.4e-12 77.4 157 35.7
Aqoxy2G03100 Aquilegia oxysepala HOM05D008610 ORTHO05D010832 1.2e-11 74.3 175 30.3
arahy.Tifrunner.gnm1.ann1.L0EE17 Arachis hypogaea HOM05D008610 ORTHO05D010832 1.7e-10 70.5 166 34.3
MELO3C006612.2 Cucumis melo HOM05D008610 ORTHO05D010832 1.7e-10 70.5 184 32.1
Lalb_Chr12g0196451 Lupinus albus HOM05D008610 ORTHO05D010832 4.9e-10 68.9 137 36.5
arahy.Tifrunner.gnm1.ann1.2NND9M Arachis hypogaea HOM05D008610 ORTHO05D010832 1.9e-09 67.0 141 34.0
PSO170G6844 Papaver somniferum HOM05D008610 ORTHO05D010832 4.1e-09 65.9 154 33.1
Nn3g21308 Nelumbo nucifera HOM05D008610 ORTHO05D010832 7.3e-06 55.1 125 32.8


User provided reference genes

Program Settings