Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0002985g0020 Nicotiana tabacum HOM05D005417 ORTHO05D002591 3.6e-186 654.8 346 100.0
Nitab4.5_0002641g0180 Nicotiana tabacum HOM05D005417 ORTHO05D002591 2.2e-143 512.7 337 84.6
Peaxi162Scf00372g00102 Petunia axillaris HOM05D005417 ORTHO05D002591 1.1e-113 414.1 364 65.9
PGSC0003DMG400022034 Solanum tuberosum HOM05D005417 ORTHO05D002591 1.3e-106 390.6 343 67.3
Sopen06g002670 Solanum pennellii HOM05D005417 ORTHO05D002591 4.2e-94 349.0 344 62.2
Solyc06g007790.1 Solanum lycopersicum HOM05D005417 ORTHO05D002591 8.0e-93 344.7 344 61.3
CAN.G181.55 Capsicum annuum HOM05D005417 ORTHO05D002591 1.2e-91 340.9 349 60.7
Peaxi162Scf00068g00216 Petunia axillaris HOM05D005417 ORTHO05D002591 9.2e-65 251.5 306 53.6
Dinv19167 Davidia involucrata HOM05D005417 ORTHO05D002591 1.0e-63 248.1 371 49.9
CSS0019537 Camellia sinensis var. sinensis HOM05D005417 ORTHO05D002591 1.5e-59 234.2 385 46.8
Nitab4.5_0001161g0100 Nicotiana tabacum HOM05D005417 ORTHO05D002591 1.9e-57 227.3 392 46.9
CAN.G800.6 Capsicum annuum HOM05D005417 ORTHO05D002591 2.8e-53 213.4 347 44.4
Manes.12G047700 Manihot esculenta HOM05D005417 ORTHO05D002591 1.1e-52 211.5 380 45.8
PGSC0003DMG400017495 Solanum tuberosum HOM05D005417 ORTHO05D002591 5.3e-52 209.1 376 45.7
Nitab4.5_0003020g0050 Nicotiana tabacum HOM05D005417 ORTHO05D002591 9.0e-52 208.4 252 51.6
Prupe.8G197900 Prunus persica HOM05D005417 ORTHO05D002591 7.6e-51 205.3 406 40.9
Oeu007785.1 Olea europaea HOM05D005417 ORTHO05D002591 1.3e-50 204.5 345 48.7
QL09p051098 Quercus lobata HOM05D005417 ORTHO05D002591 8.4e-50 201.8 370 44.6
QL09p050923 Quercus lobata HOM05D005417 ORTHO05D002591 1.9e-49 200.7 379 43.3
Oeu051530.1 Olea europaea HOM05D005417 ORTHO05D002591 9.3e-49 198.4 389 42.9
Actinidia39427 Actinidia chinensis HOM05D005417 ORTHO05D002591 2.5e-46 190.3 345 44.9
Psat3g149440 Pisum sativum HOM05D005417 ORTHO05D002591 9.6e-46 188.3 420 38.8
Nitab4.5_0013864g0020 Nicotiana tabacum HOM05D005417 ORTHO05D002591 2.8e-45 186.8 206 52.9
TWI75G1481 Tripterygium wilfordii HOM05D005417 ORTHO05D002591 3.6e-45 186.4 406 40.4
Rhsim01G0253400 Rhododendron simsii HOM05D005417 ORTHO05D002591 8.1e-45 185.3 414 40.3
Potri.002G246400 Populus trichocarpa HOM05D005417 ORTHO05D002591 1.1e-44 184.9 435 39.8
Solyc09g059550.1 Solanum lycopersicum HOM05D005417 ORTHO05D002591 2.4e-44 183.7 369 42.8
Sopen09g022730 Solanum pennellii HOM05D005417 ORTHO05D002591 3.1e-44 183.3 360 42.8
Dinv12644 Davidia involucrata HOM05D005417 ORTHO05D002591 2.0e-43 180.6 348 42.0
Cfa010419 Carpinus fangiana HOM05D005417 ORTHO05D002591 2.6e-43 180.3 353 41.9
Manes.13G049800 Manihot esculenta HOM05D005417 ORTHO05D002591 7.6e-43 178.7 400 41.5
Nitab4.5_0003656g0060 Nicotiana tabacum HOM05D005417 ORTHO05D002591 7.6e-43 178.7 301 44.2
Sabra02G0187500 Salix brachista HOM05D005417 ORTHO05D002591 1.7e-42 177.6 443 38.1
Lj1g0009273 Lotus japonicus HOM05D005417 ORTHO05D002591 3.2e-41 173.3 414 38.6
vmacro02785 Vaccinium macrocarpon HOM05D005417 ORTHO05D002591 1.6e-40 171.0 395 37.5
DCAR_012672 Daucus carota HOM05D005417 ORTHO05D002591 6.0e-40 169.1 399 37.8
Cc01_g16680 Coffea canephora HOM05D005417 ORTHO05D002591 1.3e-39 167.9 422 37.2
CiPaw.14G038800 Carya illinoinensis HOM05D005417 ORTHO05D002591 1.1e-38 164.9 377 37.9
arahy.Tifrunner.gnm1.ann1.K8JSLF Arachis hypogaea HOM05D005417 ORTHO05D002591 3.3e-38 163.3 392 39.0
VMungo1383G0191 Vigna mungo HOM05D005417 ORTHO05D002591 3.3e-38 163.3 451 35.3
MD05G1170600 Malus domestica HOM05D005417 ORTHO05D002591 5.6e-38 162.5 405 37.5
Gohir.A11G139800 Gossypium hirsutum HOM05D005417 ORTHO05D002591 7.4e-38 162.2 424 36.1
Phvul.008G132000 Phaseolus vulgaris HOM05D005417 ORTHO05D002591 7.4e-38 162.2 459 35.3
Gohir.D11G145866 Gossypium hirsutum HOM05D005417 ORTHO05D002591 2.1e-37 160.6 422 36.3
Peaxi162Scf01312g00003 Petunia axillaris HOM05D005417 ORTHO05D002591 2.8e-37 160.2 196 50.0
Medtr7g055560 Medicago truncatula HOM05D005417 ORTHO05D002591 1.4e-36 157.9 410 37.1
Medtr7g055747 Medicago truncatula HOM05D005417 ORTHO05D002591 1.4e-36 157.9 410 37.1
TWI18G1450 Tripterygium wilfordii HOM05D005417 ORTHO05D002591 1.4e-36 157.9 350 37.7
Gorai.007G156400 Gossypium raimondii HOM05D005417 ORTHO05D002591 1.8e-36 157.5 421 36.6
Rhsim13G0048000 Rhododendron simsii HOM05D005417 ORTHO05D002591 1.8e-36 157.5 340 40.6
Aa31sc95G70 Aethionema arabicum HOM05D005417 ORTHO05D002591 2.4e-36 157.1 350 39.4
MD10G1158800 Malus domestica HOM05D005417 ORTHO05D002591 4.0e-36 156.4 413 36.8
Duzib211G0292 Durio zibethinus HOM05D005417 ORTHO05D002591 5.3e-36 156.0 374 37.4
Migut.D02505 Erythranthe guttata HOM05D005417 ORTHO05D002591 6.9e-36 155.6 458 32.3
CiPaw.13G049000 Carya illinoinensis HOM05D005417 ORTHO05D002591 9.0e-36 155.2 421 37.3
Lalb_Chr03g0041401 Lupinus albus HOM05D005417 ORTHO05D002591 1.2e-35 154.8 136 61.0
PGR083G2240 Punica granatum HOM05D005417 ORTHO05D002591 1.2e-35 154.8 365 37.0
COL.COLO4_08651 Corchorus olitorius HOM05D005417 ORTHO05D002591 2.6e-35 153.7 389 36.8
Sc05g0001930 Simmondsia chinensis HOM05D005417 ORTHO05D002591 2.6e-35 153.7 369 37.9
Gorai.001G188400 Gossypium raimondii HOM05D005417 ORTHO05D002591 5.8e-35 152.5 353 40.2
Thecc.01G219200 Theobroma cacao HOM05D005417 ORTHO05D002591 7.6e-35 152.1 383 36.0
A07p07230 Brassica napus HOM05D005417 ORTHO05D002591 1.3e-34 151.4 387 37.5
MSTRG.18834 Avicennia marina HOM05D005417 ORTHO05D002591 1.7e-34 151.0 410 35.6
EL10Ac7g17913 Beta vulgaris HOM05D005417 ORTHO05D002591 2.2e-34 150.6 373 41.0
BraA07t28509Z Brassica rapa HOM05D005417 ORTHO05D002591 2.9e-34 150.2 386 38.1
C07p10920 Brassica napus HOM05D005417 ORTHO05D002591 8.4e-34 148.7 386 37.0
Gohir.A07G092900 Gossypium hirsutum HOM05D005417 ORTHO05D002591 1.9e-33 147.5 329 39.8
Sp3g22720 Schrenkiella parvula HOM05D005417 ORTHO05D002591 1.9e-33 147.5 383 34.5
Solyc06g083330.2 Solanum lycopersicum HOM05D005417 ORTHO05D002591 1.9e-33 147.5 200 45.0
BcaC06g35784 Brassica carinata HOM05D005417 ORTHO05D002591 3.2e-33 146.7 386 37.0
BolC7t41558H Brassica oleracea HOM05D005417 ORTHO05D002591 3.2e-33 146.7 386 37.0
SGA_v2.0_scaffold156G37265 Striga asiatica HOM05D005417 ORTHO05D002591 5.5e-33 146.0 329 35.6
PGSC0003DMG400020102 Solanum tuberosum HOM05D005417 ORTHO05D002591 7.1e-33 145.6 200 44.5
SalBow6G1220 Salvia bowleyana HOM05D005417 ORTHO05D002591 1.6e-32 144.4 340 37.9
ECA248G2280 Erigeron canadensis HOM05D005417 ORTHO05D002591 1.3e-31 141.4 383 35.5
PSO063G3464 Papaver somniferum HOM05D005417 ORTHO05D002591 2.3e-31 140.6 407 35.1
Ciclev10024373m.g Citrus clementina HOM05D005417 ORTHO05D002591 3.9e-31 139.8 379 34.0
Gohir.D07G097400 Gossypium hirsutum HOM05D005417 ORTHO05D002591 5.1e-31 139.4 329 40.1
Eucgr.K02134 Eucalyptus grandis HOM05D005417 ORTHO05D002591 6.7e-31 139.0 414 34.8
Gorai.001G104900 Gossypium raimondii HOM05D005417 ORTHO05D002591 6.7e-31 139.0 325 40.9
Nn1g07983 Nelumbo nucifera HOM05D005417 ORTHO05D002591 1.9e-30 137.5 344 37.2
Atru.chr6.1429 Acer truncatum HOM05D005417 ORTHO05D002591 4.3e-30 136.3 364 36.8
Sopen06g034710 Solanum pennellii HOM05D005417 ORTHO05D002591 4.3e-30 136.3 200 43.0
FAN15G1498 Fragaria x ananassa HOM05D005417 ORTHO05D002591 1.3e-29 134.8 563 30.7
MELO3C022719.2 Cucumis melo HOM05D005417 ORTHO05D002591 2.8e-29 133.7 259 39.0
Ca_03471_v3 Cicer arietinum L. HOM05D005417 ORTHO05D002591 3.7e-29 133.3 230 41.7
RcHm_v2.0_Chr6g0284001 Rosa chinensis HOM05D005417 ORTHO05D002591 4.8e-29 132.9 560 30.2
Lsat_1_v5_gn_9_14981 Lactuca sativa HOM05D005417 ORTHO05D002591 8.2e-29 132.1 378 34.7
Aqoxy2G03972 Aquilegia oxysepala HOM05D005417 ORTHO05D002591 1.1e-28 131.7 315 36.8
Cpa.g.sc34.103 Carica papaya HOM05D005417 ORTHO05D002591 1.4e-28 131.3 402 35.1
FAN24G0779 Fragaria x ananassa HOM05D005417 ORTHO05D002591 3.1e-28 130.2 561 30.8
Gohir.A07G161200 Gossypium hirsutum HOM05D005417 ORTHO05D002591 3.1e-28 130.2 360 38.9
TAR636G0419 Trochodendron aralioides HOM05D005417 ORTHO05D002591 3.1e-28 130.2 113 62.8
FvH4_2g18490 Fragaria vesca HOM05D005417 ORTHO05D002591 6.9e-28 129.0 561 30.5
ECA247G2945 Erigeron canadensis HOM05D005417 ORTHO05D002591 7.6e-27 125.6 281 38.8
FAN27G1148 Fragaria x ananassa HOM05D005417 ORTHO05D002591 1.3e-26 124.8 555 29.7
PGR044G1095 Punica granatum HOM05D005417 ORTHO05D002591 1.3e-26 124.8 398 34.9
Glyma.08G348101 Glycine max HOM05D005417 ORTHO05D002591 1.7e-26 124.4 495 31.1
AT3G25130 Arabidopsis thaliana HOM05D005417 ORTHO05D002591 3.8e-26 123.2 392 34.9
TAR365G0760 Trochodendron aralioides HOM05D005417 ORTHO05D002591 3.8e-26 123.2 447 31.8
vmacro14737 Vaccinium macrocarpon HOM05D005417 ORTHO05D002591 4.9e-26 122.9 148 48.6
ClCG07G002110 Citrullus lanatus HOM05D005417 ORTHO05D002591 1.4e-25 121.3 274 35.8
TPR.G976 Trifolium pratense HOM05D005417 ORTHO05D002591 4.2e-25 119.8 377 35.5
HanXRQChr10g0279531 Helianthus annuus HOM05D005417 ORTHO05D002591 7.1e-25 119.0 494 29.8
BcaB06g26721 Brassica carinata HOM05D005417 ORTHO05D002591 9.3e-25 118.6 361 32.4
Nn3g20048 Nelumbo nucifera HOM05D005417 ORTHO05D002591 9.3e-25 118.6 348 33.3
Nn3g20049 Nelumbo nucifera HOM05D005417 ORTHO05D002591 9.3e-25 118.6 348 33.3
MSTRG.20970 Avicennia marina HOM05D005417 ORTHO05D002591 1.2e-24 118.2 442 31.9
MBI11_g07415_MAGBIO Magnolia biondii HOM05D005417 ORTHO05D002591 1.2e-24 118.2 325 36.3
AL3G40820 Arabidopsis lyrata HOM05D005417 ORTHO05D002591 1.6e-24 117.9 402 32.8
Glyma.18G159700 Glycine max HOM05D005417 ORTHO05D002591 1.6e-24 117.9 496 31.2
CARHR101450 Cardamine hirsuta HOM05D005417 ORTHO05D002591 5.1e-23 112.8 295 32.5
HanXRQChr01g0015481 Helianthus annuus HOM05D005417 ORTHO05D002591 9.7e-22 108.6 196 39.3
Sed0010610 Sechium edule HOM05D005417 ORTHO05D002591 9.7e-22 108.6 130 50.0
PSO017G4959 Papaver somniferum HOM05D005417 ORTHO05D002591 2.2e-21 107.5 367 31.3
SGA_v2.0_scaffold3G01638 Striga asiatica HOM05D005417 ORTHO05D002591 6.3e-21 105.9 343 33.8
Carub.0003s2546 Capsella rubella HOM05D005417 ORTHO05D002591 5.3e-20 102.8 382 30.6
THA.LOC104804626 Tarenaya hassleriana HOM05D005417 ORTHO05D002591 2.6e-19 100.5 385 30.9
MBI07_g27364_MAGBIO Magnolia biondii HOM05D005417 ORTHO05D002591 2.2e-18 97.4 117 49.6
ATR0561G108 Amborella trichopoda HOM05D005417 ORTHO05D002591 3.8e-18 96.7 363 30.3
Haze_03369 Corylus avellana HOM05D005417 ORTHO05D002591 7.2e-17 92.4 257 38.5
TPR.G6388 Trifolium pratense HOM05D005417 ORTHO05D002591 6.1e-16 89.4 59 69.5
unitig_749.g13592 Utricularia gibba HOM05D005417 ORTHO05D002591 7.9e-16 89.0 345 28.1
SalBow5G5435 Salvia bowleyana HOM05D005417 ORTHO05D002591 3.9e-15 86.7 174 37.9
HPP92_009946 Vanilla planifolia HOM05D005417 ORTHO05D002591 1.4e-12 78.2 349 31.5
Gohir.D07G164700 Gossypium hirsutum HOM05D005417 ORTHO05D002591 9.1e-12 75.5 325 32.9
unitig_899.g15407 Utricularia gibba HOM05D005417 ORTHO05D002591 1.2e-11 75.1 339 31.3
ClCG09G008640 Citrullus lanatus HOM05D005417 ORTHO05D002591 5.0e-10 69.7 350 27.4
Zm00001eb090480 Zea mays HOM05D005417 ORTHO05D002591 8.5e-10 68.9 171 32.7
Os11g0458100 Oryza sativa ssp. japonica HOM05D005417 ORTHO05D002591 2.5e-09 67.4 156 36.5
MELO3C021078.2 Cucumis melo HOM05D005417 ORTHO05D002591 2.7e-08 63.9 357 29.4
AUR62016544 Chenopodium quinoa HOM05D005417 ORTHO05D002591 1.5e-06 58.2 222 32.4
Lj5g0025661 Lotus japonicus HOM05D005417 ORTHO05D002591 7.4e-06 55.8 159 30.8


User provided reference genes

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