Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0002980g0110 Nicotiana tabacum HOM05D009794 ORTHO05D000309 1.9e-91 339.3 193 100.0
Nitab4.5_0000682g0010 Nicotiana tabacum HOM05D009794 ORTHO05D000309 1.6e-58 229.9 166 71.7
Nitab4.5_0004685g0020 Nicotiana tabacum HOM05D009794 ORTHO05D000309 1.6e-42 176.8 214 49.5
Nitab4.5_0003321g0080 Nicotiana tabacum HOM05D009794 ORTHO05D000309 1.7e-39 166.8 156 58.3
Nitab4.5_0000270g0070 Nicotiana tabacum HOM05D009794 ORTHO05D000309 4.9e-39 165.2 209 48.8
Nitab4.5_0016516g0010 Nicotiana tabacum HOM05D009794 ORTHO05D000309 2.1e-34 149.8 83 81.9
Nitab4.5_0000529g0090 Nicotiana tabacum HOM05D009794 ORTHO05D000309 6.8e-33 144.8 70 91.4
Nitab4.5_0001759g0090 Nicotiana tabacum HOM05D009794 ORTHO05D000309 2.6e-32 142.9 70 91.4
Nitab4.5_0000073g0140 Nicotiana tabacum HOM05D009794 ORTHO05D000309 7.5e-32 141.4 83 78.3
Nitab4.5_0002918g0110 Nicotiana tabacum HOM05D009794 ORTHO05D000309 7.5e-32 141.4 83 77.1
Nitab4.5_0000381g0280 Nicotiana tabacum HOM05D009794 ORTHO05D000309 2.8e-31 139.4 70 88.6
Nitab4.5_0001817g0050 Nicotiana tabacum HOM05D009794 ORTHO05D000309 1.1e-30 137.5 156 50.6
Nitab4.5_0000128g0210 Nicotiana tabacum HOM05D009794 ORTHO05D000309 1.4e-30 137.1 70 87.1
Nitab4.5_0000141g0260 Nicotiana tabacum HOM05D009794 ORTHO05D000309 7.8e-29 131.3 68 86.8
Nitab4.5_0000337g0240 Nicotiana tabacum HOM05D009794 ORTHO05D000309 1.5e-27 127.1 89 69.7
Nitab4.5_0002330g0150 Nicotiana tabacum HOM05D009794 ORTHO05D000309 1.0e-25 120.9 67 82.1
Nitab4.5_0000299g0230 Nicotiana tabacum HOM05D009794 ORTHO05D000309 1.8e-25 120.2 59 89.8
Nitab4.5_0011105g0020 Nicotiana tabacum HOM05D009794 ORTHO05D000309 1.3e-23 114.0 57 91.2
Nitab4.5_0009435g0010 Nicotiana tabacum HOM05D009794 ORTHO05D000309 4.9e-23 112.1 58 86.2
Nitab4.5_0005116g0030 Nicotiana tabacum HOM05D009794 ORTHO05D000309 1.4e-22 110.5 79 70.9
Nitab4.5_0000901g0070 Nicotiana tabacum HOM05D009794 ORTHO05D000309 4.1e-22 109.0 78 70.5
Peaxi162Scf00075g00085 Petunia axillaris HOM05D001383 ORTHO05D000309 5.1e-12 75.5 99 39.4
Peaxi162Scf00145g00107 Petunia axillaris HOM05D001383 ORTHO05D000309 4.3e-11 72.4 58 55.2
Peaxi162Scf00351g00017 Petunia axillaris HOM05D001383 ORTHO05D000309 4.3e-11 72.4 62 51.6
Peaxi162Scf00465g00011 Petunia axillaris HOM05D001383 ORTHO05D000309 7.3e-11 71.6 62 51.6
Peaxi162Scf01316g00007 Petunia axillaris HOM05D001383 ORTHO05D000309 7.3e-11 71.6 62 51.6
Nitab4.5_0011168g0010 Nicotiana tabacum HOM05D009794 ORTHO05D000309 1.1e-09 67.8 51 60.8
Peaxi162Scf00147g01910 Petunia axillaris HOM05D001383 ORTHO05D000309 1.1e-09 67.8 57 52.6
Peaxi162Scf00063g00023 Petunia axillaris HOM05D001383 ORTHO05D000309 2.3e-09 66.6 62 50.0
Peaxi162Scf00884g00023 Petunia axillaris HOM05D001383 ORTHO05D000309 3.1e-09 66.2 62 48.4
Peaxi162Scf00331g00022 Petunia axillaris HOM05D009794 ORTHO05D000309 1.2e-08 64.3 62 48.4
Peaxi162Scf00990g00010 Petunia axillaris HOM05D001383 ORTHO05D000309 2.6e-08 63.2 128 34.4
PGSC0003DMG400008721 Solanum tuberosum HOM05D009408 ORTHO05D000309 2.6e-08 63.2 55 47.3
Peaxi162Scf00171g00022 Petunia axillaris HOM05D001383 ORTHO05D000309 5.8e-08 62.0 65 41.5
Peaxi162Scf00225g00101 Petunia axillaris HOM05D001383 ORTHO05D000309 5.8e-08 62.0 65 41.5
Peaxi162Scf00699g00025 Petunia axillaris HOM05D001383 ORTHO05D000309 5.8e-08 62.0 65 41.5
Peaxi162Scf00795g00012 Petunia axillaris HOM05D001383 ORTHO05D000309 5.8e-08 62.0 65 41.5
Solyc09g072730.2 Solanum lycopersicum HOM05D009408 ORTHO05D000309 5.8e-08 62.0 55 47.3
Solyc10g055427.1 Solanum lycopersicum HOM05D009408 ORTHO05D000309 5.8e-08 62.0 55 47.3
Solyc10g080784.1 Solanum lycopersicum HOM05D008169 ORTHO05D004497 5.8e-08 62.0 55 47.3
Peaxi162Scf00723g00110 Petunia axillaris HOM05D001383 ORTHO05D000309 7.6e-08 61.6 75 45.3
PGSC0003DMG402006646 Solanum tuberosum HOM05D009408 ORTHO05D000309 7.6e-08 61.6 40 62.5
Peaxi162Scf00101g00219 Petunia axillaris HOM05D001383 ORTHO05D000309 9.9e-08 61.2 58 48.3
Solyc12g062733.2 Solanum lycopersicum HOM05D009408 ORTHO05D000309 9.9e-08 61.2 60 43.3
PGSC0003DMG400014126 Solanum tuberosum HOM05D009408 ORTHO05D000309 1.3e-07 60.8 55 45.5
PGSC0003DMG400029733 Solanum tuberosum HOM05D009408 ORTHO05D000309 1.3e-07 60.8 55 45.5
Nitab4.5_0000115g0400 Nicotiana tabacum HOM05D001383 ORTHO05D000309 1.7e-07 60.5 77 37.7
Peaxi162Scf01414g00015 Petunia axillaris HOM05D001383 ORTHO05D000309 1.7e-07 60.5 128 33.6
CAN.G1459.18 Capsicum annuum HOM05D009408 ORTHO05D000309 3.7e-07 59.3 60 43.3
Medtr2g008290 Medicago truncatula HOM05D001383 ORTHO05D000309 3.7e-07 59.3 60 46.7
Medtr3g045410 Medicago truncatula HOM05D001383 ORTHO05D000309 3.7e-07 59.3 97 34.0
Medtr5g021030 Medicago truncatula HOM05D001383 ORTHO05D000309 3.7e-07 59.3 60 46.7
Peaxi162Scf01302g00024 Petunia axillaris HOM05D001383 ORTHO05D000309 3.7e-07 59.3 65 40.0
Prupe.8G093700 Prunus persica HOM05D001383 ORTHO05D000309 3.7e-07 59.3 61 42.6
Hma1.2p1_0825F.1_g224740 Hydrangea macrophylla HOM05D015331 ORTHO05D000309 4.9e-07 58.9 60 41.7
Peaxi162Scf00320g00217 Petunia axillaris HOM05D001383 ORTHO05D000309 4.9e-07 58.9 77 40.3
Peaxi162Scf00368g00111 Petunia axillaris HOM05D001383 ORTHO05D000309 6.4e-07 58.5 61 41.0
Actinidia16536 Actinidia chinensis HOM05D001383 ORTHO05D000309 8.4e-07 58.2 71 39.4
Eucgr.L00016 Eucalyptus grandis HOM05D001383 ORTHO05D000309 8.4e-07 58.2 69 40.6
Lj2P525T32 Lonicera japonica HOM05D008126 ORTHO05D000309 8.4e-07 58.2 48 52.1
CAN.G781.1 Capsicum annuum HOM05D009408 ORTHO05D000309 1.1e-06 57.8 62 41.9
Nitab4.5_0007977g0060 Nicotiana tabacum HOM05D001383 ORTHO05D000309 1.1e-06 57.8 62 45.2
PGSC0003DMG400041825 Solanum tuberosum HOM05D009408 ORTHO05D000309 1.4e-06 57.4 55 43.6
Dinv05615 Davidia involucrata HOM05D001383 ORTHO05D000309 1.9e-06 57.0 53 49.1
Eucgr.A01387 Eucalyptus grandis HOM05D001383 ORTHO05D000309 1.9e-06 57.0 69 40.6
CAN.G1343.17 Capsicum annuum HOM05D009408 ORTHO05D000309 2.4e-06 56.6 62 41.9
Eucgr.E01520 Eucalyptus grandis HOM05D001383 ORTHO05D000309 2.4e-06 56.6 69 39.1
Eucgr.K02370 Eucalyptus grandis HOM05D001383 ORTHO05D000309 2.4e-06 56.6 69 39.1
Lsat_1_v5_gn_8_86741 Lactuca sativa HOM05D009585 ORTHO05D000309 2.4e-06 56.6 61 44.3
Prupe.7G055500 Prunus persica HOM05D001383 ORTHO05D000309 2.4e-06 56.6 61 41.0
Eucgr.A00901 Eucalyptus grandis HOM05D001383 ORTHO05D000309 4.1e-06 55.8 69 39.1
Eucgr.J01886 Eucalyptus grandis HOM05D001383 ORTHO05D000309 4.1e-06 55.8 69 37.7
CAN.G1014.58 Capsicum annuum HOM05D009408 ORTHO05D000309 5.4e-06 55.5 43 51.2
CAN.G548.7 Capsicum annuum HOM05D009408 ORTHO05D000309 5.4e-06 55.5 64 40.6
Medtr1g039350 Medicago truncatula HOM05D001383 ORTHO05D000309 5.4e-06 55.5 60 43.3
Solyc03g096303.1 Solanum lycopersicum HOM05D009408 ORTHO05D000309 5.4e-06 55.5 43 51.2
Gohir.A01G209050 Gossypium hirsutum HOM05D001383 ORTHO05D000309 7.1e-06 55.1 63 39.7
Hma1.2p1_1224F.1_g268490 Hydrangea macrophylla HOM05D015331 ORTHO05D000309 7.1e-06 55.1 60 40.0
vmacro12616 Vaccinium macrocarpon HOM05D001383 ORTHO05D000309 9.2e-06 54.7 61 37.7
vmacro15909 Vaccinium macrocarpon HOM05D001383 ORTHO05D000309 9.2e-06 54.7 114 31.6


User provided reference genes

Program Settings