Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0002974g0030 Nicotiana tabacum HOM05D003899 ORTHO05D003655 1.1e-60 236.5 126 100.0
Nitab4.5_0015327g0010 Nicotiana tabacum HOM05D003899 ORTHO05D003655 4.6e-38 161.4 97 85.6
Peaxi162Scf00263g00033 Petunia axillaris HOM05D003899 ORTHO05D003655 5.4e-31 137.9 113 69.0
PGSC0003DMG400030777 Solanum tuberosum HOM05D003899 ORTHO05D003655 6.0e-30 134.4 123 65.9
Sopen06g019720 Solanum pennellii HOM05D003899 ORTHO05D003655 3.4e-25 118.6 118 60.2
Nitab4.5_0004770g0030 Nicotiana tabacum HOM05D003899 ORTHO05D003655 5.8e-25 117.9 111 64.0
PGSC0003DMG400024810 Solanum tuberosum HOM05D003899 ORTHO05D003655 9.9e-25 117.1 119 56.3
Nitab4.5_0000299g0020 Nicotiana tabacum HOM05D003899 ORTHO05D003655 3.8e-24 115.2 111 62.2
CAN.G833.2 Capsicum annuum HOM05D003899 ORTHO05D003655 4.9e-24 114.8 82 74.4
PGSC0003DMG400030778 Solanum tuberosum HOM05D003899 ORTHO05D003655 6.4e-24 114.4 82 70.7
Solyc07g045590.1 Solanum lycopersicum HOM05D003899 ORTHO05D003655 3.2e-23 112.1 119 52.9
Solyc03g033280.1 Solanum lycopersicum HOM05D003899 ORTHO05D003655 9.3e-23 110.5 119 52.9
Solyc06g054660.1 Solanum lycopersicum HOM05D003899 ORTHO05D003655 2.7e-22 109.0 117 58.1
PGSC0003DMG400024811 Solanum tuberosum HOM05D003899 ORTHO05D003655 3.9e-21 105.1 109 60.6
CAN.G1012.7 Capsicum annuum HOM05D003899 ORTHO05D003655 2.1e-19 99.4 119 52.1
CAN.G833.1 Capsicum annuum HOM05D003899 ORTHO05D003655 2.6e-17 92.4 62 75.8
Solyc03g033290.1 Solanum lycopersicum HOM05D003899 ORTHO05D003655 3.8e-16 88.6 78 60.3
ClCG08G006450 Citrullus lanatus HOM05D000058 ORTHO05D000077 5.4e-15 84.7 104 49.0
MSTRG.1375 Avicennia marina HOM05D003899 ORTHO05D003655 7.9e-14 80.9 113 46.0
Oeu030532.1 Olea europaea HOM05D003899 ORTHO05D003655 7.9e-14 80.9 111 46.8
MELO3C027328.2 Cucumis melo HOM05D003899 ORTHO05D003655 1.7e-13 79.7 95 48.4
TWI32G0122 Tripterygium wilfordii HOM05D003899 ORTHO05D003655 3.0e-13 79.0 113 42.5
CsaV3_6G030980 Cucumis sativus L. HOM05D003899 ORTHO05D003655 5.1e-13 78.2 102 48.0
FAN20G0153 Fragaria x ananassa HOM05D003899 ORTHO05D003655 8.7e-13 77.4 102 47.1
Peaxi162Scf00033g00086 Petunia axillaris HOM05D003899 ORTHO05D003655 8.7e-13 77.4 50 76.0
Dinv41123 Davidia involucrata HOM05D000043 ORTHO05D002577 2.5e-12 75.9 97 48.5
Dinv24330 Davidia involucrata HOM05D003899 ORTHO05D003655 3.3e-12 75.5 116 38.8
Migut.N03236 Erythranthe guttata HOM05D003899 ORTHO05D003655 4.3e-12 75.1 112 43.8
FvH4_2g14670 Fragaria vesca HOM05D003899 ORTHO05D003655 4.3e-12 75.1 85 50.6
FAN24G0119 Fragaria x ananassa HOM05D003899 ORTHO05D003655 4.3e-12 75.1 85 50.6
RcHm_v2.0_Chr6g0277141 Rosa chinensis HOM05D003899 ORTHO05D003655 4.3e-12 75.1 86 50.0
Sed0026893 Sechium edule HOM05D003899 ORTHO05D003655 1.6e-11 73.2 83 50.6
FAN15G3500 Fragaria x ananassa HOM05D003899 ORTHO05D003655 2.8e-11 72.4 85 49.4
TAR381G0487 Trochodendron aralioides HOM05D003899 ORTHO05D003655 3.6e-11 72.0 80 47.5
Cfa018365 Carpinus fangiana HOM05D003899 ORTHO05D003655 4.8e-11 71.6 120 43.3
COL.COLO4_08943 Corchorus olitorius HOM05D003899 ORTHO05D003655 4.8e-11 71.6 73 50.7
Atru.chr4.839 Acer truncatum HOM05D003899 ORTHO05D003655 6.2e-11 71.2 116 39.7
Duzib093G0910 Durio zibethinus HOM05D003899 ORTHO05D003655 8.1e-11 70.9 79 45.6
Actinidia06640 Actinidia chinensis HOM05D003899 ORTHO05D003655 1.8e-10 69.7 112 38.4
HanXRQChr04g0125201 Helianthus annuus HOM05D003899 ORTHO05D003655 2.4e-10 69.3 107 39.3
Prupe.8G018800 Prunus persica HOM05D003899 ORTHO05D003655 3.1e-10 68.9 117 38.5
Gohir.A02G066500 Gossypium hirsutum HOM05D003899 ORTHO05D003655 4.0e-10 68.6 117 40.2
Psat6g039960 Pisum sativum HOM05D003899 ORTHO05D003655 5.3e-10 68.2 114 42.1
Dinv25809 Davidia involucrata HOM05D003899 ORTHO05D003655 6.9e-10 67.8 54 61.1
ECA246G5022 Erigeron canadensis HOM05D003899 ORTHO05D003655 6.9e-10 67.8 99 42.4
Thecc.01G128000 Theobroma cacao HOM05D003899 ORTHO05D003655 6.9e-10 67.8 105 39.0
Haze_17704 Corylus avellana HOM05D003899 ORTHO05D003655 1.5e-09 66.6 119 39.5
Lsat_1_v5_gn_5_108780 Lactuca sativa HOM05D003899 ORTHO05D003655 2.0e-09 66.2 94 43.6
Lj2C604T3 Lonicera japonica HOM05D003899 ORTHO05D003655 2.6e-09 65.9 79 44.3
Lj2C604T4 Lonicera japonica HOM05D003899 ORTHO05D003655 2.6e-09 65.9 79 44.3
Lj1g0026176 Lotus japonicus HOM05D003899 ORTHO05D003655 3.4e-09 65.5 133 39.1
DCAR_007049 Daucus carota HOM05D003899 ORTHO05D003655 4.5e-09 65.1 108 36.1
ECA246G3613 Erigeron canadensis HOM05D003899 ORTHO05D003655 4.5e-09 65.1 104 40.4
MD05G1014900 Malus domestica HOM05D003899 ORTHO05D003655 4.5e-09 65.1 101 40.6
Nn1g06205 Nelumbo nucifera HOM05D003899 ORTHO05D003655 4.5e-09 65.1 80 43.8
QL02p025320 Quercus lobata HOM05D003899 ORTHO05D003655 4.5e-09 65.1 106 42.5
CiPaw.16G017800 Carya illinoinensis HOM05D003899 ORTHO05D003655 5.8e-09 64.7 112 43.8
Duzib041G0166 Durio zibethinus HOM05D003899 ORTHO05D003655 5.8e-09 64.7 118 39.0
Gorai.005G081600 Gossypium raimondii HOM05D003899 ORTHO05D003655 7.6e-09 64.3 118 43.2
Lsat_1_v5_gn_9_107661 Lactuca sativa HOM05D003899 ORTHO05D003655 7.6e-09 64.3 94 43.6
Manes.12G153900 Manihot esculenta HOM05D003899 ORTHO05D003655 7.6e-09 64.3 103 41.7
Nn5g28622 Nelumbo nucifera HOM05D003899 ORTHO05D003655 7.6e-09 64.3 80 43.8
Lsat_1_v5_gn_5_108760 Lactuca sativa HOM05D003899 ORTHO05D003655 9.9e-09 63.9 92 43.5
Medtr1g029140 Medicago truncatula HOM05D003899 ORTHO05D003655 1.3e-08 63.5 111 42.3
CANSAT25G0207 Cannabis sativa HOM05D003899 ORTHO05D003655 1.7e-08 63.2 117 41.0
DCAR_001362 Daucus carota HOM05D003899 ORTHO05D003655 1.7e-08 63.2 75 41.3
Phvul.001G052300 Phaseolus vulgaris HOM05D003899 ORTHO05D003655 1.7e-08 63.2 74 48.6
arahy.Tifrunner.gnm1.ann1.UE47UQ Arachis hypogaea HOM05D003899 ORTHO05D003655 2.2e-08 62.8 86 45.3
Glyma.14G121800 Glycine max HOM05D003899 ORTHO05D003655 2.9e-08 62.4 101 44.6
Rhsim10G0136200 Rhododendron simsii HOM05D003899 ORTHO05D003655 2.9e-08 62.4 79 45.6
RhsimUnG0132700 Rhododendron simsii HOM05D003899 ORTHO05D003655 2.9e-08 62.4 79 45.6
CANSAT11G1227 Cannabis sativa HOM05D003899 ORTHO05D003655 3.8e-08 62.0 80 38.8
THA.LOC104806849 Tarenaya hassleriana HOM05D003899 ORTHO05D003655 3.8e-08 62.0 117 37.6
Aqoxy3G00817 Aquilegia oxysepala HOM05D003899 ORTHO05D003655 4.9e-08 61.6 82 43.9
BcaB07g33974 Brassica carinata HOM05D003899 ORTHO05D003655 6.4e-08 61.2 87 36.8
BolC6t35162H Brassica oleracea HOM05D003899 ORTHO05D003655 6.4e-08 61.2 88 37.5
COL.COLO4_14024 Corchorus olitorius HOM05D003899 ORTHO05D003655 6.4e-08 61.2 94 41.5
A10p07750 Brassica napus HOM05D003899 ORTHO05D003655 8.4e-08 60.8 87 36.8
BraSC36t46027Z Brassica rapa HOM05D003899 ORTHO05D003655 8.4e-08 60.8 87 36.8
Ca_12820_v3 Cicer arietinum L. HOM05D003899 ORTHO05D003655 8.4e-08 60.8 107 38.3
Gohir.D02G072400 Gossypium hirsutum HOM05D003899 ORTHO05D003655 8.4e-08 60.8 117 40.2
MBI06_g43012_MAGBIO Magnolia biondii HOM05D003899 ORTHO05D003655 8.4e-08 60.8 114 41.2
TPR.G12083 Trifolium pratense HOM05D003899 ORTHO05D003655 8.4e-08 60.8 88 43.2
TWI60G1060 Tripterygium wilfordii HOM05D003899 ORTHO05D003655 8.4e-08 60.8 60 51.7
Thhalv10012331m.g Eutrema salsugineum HOM05D003899 ORTHO05D003655 1.4e-07 60.1 87 39.1
Medtr1g008620 Medicago truncatula HOM05D003899 ORTHO05D003655 1.9e-07 59.7 95 42.1
BcaB03g16849 Brassica carinata HOM05D003899 ORTHO05D003655 2.4e-07 59.3 87 40.2
Gohir.A11G224804 Gossypium hirsutum HOM05D003899 ORTHO05D003655 2.4e-07 59.3 105 42.9
QL02p025328 Quercus lobata HOM05D003899 ORTHO05D003655 2.4e-07 59.3 77 44.2
Glyma.14G122000 Glycine max HOM05D003899 ORTHO05D003655 5.5e-07 58.2 60 53.3
MD10G1014900 Malus domestica HOM05D003899 ORTHO05D003655 5.5e-07 58.2 77 42.9
CSS0023777 Camellia sinensis var. sinensis HOM05D003899 ORTHO05D003655 7.1e-07 57.8 76 38.2
Cpa.g.sc42.130 Carica papaya HOM05D003899 ORTHO05D003655 7.1e-07 57.8 79 40.5
Dinv03732 Davidia involucrata HOM05D000043 ORTHO05D002577 7.1e-07 57.8 78 37.2
Duzib264G1053 Durio zibethinus HOM05D003899 ORTHO05D003655 7.1e-07 57.8 120 34.2
Manes.18G087500 Manihot esculenta HOM05D003899 ORTHO05D003655 7.1e-07 57.8 75 46.7
BcaC08g42822 Brassica carinata HOM05D003899 ORTHO05D003655 9.3e-07 57.4 76 39.5
CiPaw.15G021500 Carya illinoinensis HOM05D003899 ORTHO05D003655 9.3e-07 57.4 79 46.8
THA.LOC104800071 Tarenaya hassleriana HOM05D003899 ORTHO05D003655 9.3e-07 57.4 78 39.7
Aqoxy5G02188 Aquilegia oxysepala HOM05D003899 ORTHO05D003655 1.2e-06 57.0 102 35.3
ECA238G1798 Erigeron canadensis HOM05D003899 ORTHO05D003655 1.2e-06 57.0 61 47.5
Thhalv10012251m.g Eutrema salsugineum HOM05D003899 ORTHO05D003655 1.2e-06 57.0 101 34.7
Hma1.2p1_0528F.1_g173010 Hydrangea macrophylla HOM05D003899 ORTHO05D003655 1.6e-06 56.6 71 42.3
C06p00330 Brassica napus HOM05D003899 ORTHO05D003655 2.1e-06 56.2 91 35.2
Gohir.D11G228940 Gossypium hirsutum HOM05D003899 ORTHO05D003655 2.1e-06 56.2 92 40.2
Sabra07G0088500 Salix brachista HOM05D000850 ORTHO05D000266 2.1e-06 56.2 81 35.8
Sp1g32910 Schrenkiella parvula HOM05D003899 ORTHO05D003655 2.1e-06 56.2 82 40.2
Thecc.08G144600 Theobroma cacao HOM05D003899 ORTHO05D003655 2.1e-06 56.2 118 38.1
TPR.G33315 Trifolium pratense HOM05D003899 ORTHO05D003655 2.1e-06 56.2 66 40.9
Gorai.003G068900 Gossypium raimondii HOM05D003899 ORTHO05D003655 2.7e-06 55.8 92 39.1
Phvul.001G073300 Phaseolus vulgaris HOM05D003899 ORTHO05D003655 3.5e-06 55.5 60 51.7
CSS0000461 Camellia sinensis var. sinensis HOM05D003899 ORTHO05D003655 4.6e-06 55.1 68 45.6
Ciclev10003780m.g Citrus clementina HOM05D003899 ORTHO05D003655 4.6e-06 55.1 116 32.8
QL06p029227 Quercus lobata HOM05D003899 ORTHO05D003655 6.0e-06 54.7 75 46.7
Cpa.g.sc49.66 Carica papaya HOM05D003899 ORTHO05D003655 7.9e-06 54.3 77 44.2
Nn5g28623 Nelumbo nucifera HOM05D003899 ORTHO05D003655 7.9e-06 54.3 116 42.2


User provided reference genes

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