Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0002969g0040 Nicotiana tabacum HOM05D006025 ORTHO05D008547 8.9e-153 543.9 341 100.0
Nitab4.5_0000679g0100 Nicotiana tabacum HOM05D006025 ORTHO05D008547 1.2e-130 470.3 349 76.2
PGSC0003DMG400017619 Solanum tuberosum HOM05D006025 ORTHO05D008547 2.9e-127 459.1 341 80.9
Sopen05g002930 Solanum pennellii HOM05D006025 ORTHO05D008547 3.7e-127 458.8 342 79.5
Peaxi162Scf00209g00517 Petunia axillaris HOM05D006025 ORTHO05D008547 5.8e-120 434.9 341 79.2
CAN.G27.7 Capsicum annuum HOM05D006025 ORTHO05D008547 4.8e-114 415.2 355 67.9
Cc11_g13550 Coffea canephora HOM05D006025 ORTHO05D008547 1.1e-94 350.9 341 61.3
Actinidia31175 Actinidia chinensis HOM05D006025 ORTHO05D008547 3.2e-94 349.4 341 59.2
Prupe.1G267200 Prunus persica HOM05D006025 ORTHO05D008547 3.0e-92 342.8 253 71.9
MSTRG.7831 Avicennia marina HOM05D006025 ORTHO05D008547 1.1e-91 340.9 302 64.6
SalBow8G3437 Salvia bowleyana HOM05D006025 ORTHO05D008547 1.5e-91 340.5 254 73.6
Migut.E00118 Erythranthe guttata HOM05D006025 ORTHO05D008547 1.6e-90 337.0 253 71.5
QL03p065944 Quercus lobata HOM05D006025 ORTHO05D008547 1.1e-89 334.3 347 56.2
Dinv34195 Davidia involucrata HOM05D006025 ORTHO05D008547 1.4e-89 334.0 342 58.2
MD13G1079600 Malus domestica HOM05D006025 ORTHO05D008547 1.4e-89 334.0 253 71.1
RcHm_v2.0_Chr4g0440761 Rosa chinensis HOM05D006025 ORTHO05D008547 1.4e-89 334.0 256 72.7
COL.COLO4_36182 Corchorus olitorius HOM05D006025 ORTHO05D008547 2.6e-88 329.7 335 58.2
FvH4_4g32070 Fragaria vesca HOM05D006025 ORTHO05D008547 3.4e-88 329.3 246 72.0
MD16G1079500 Malus domestica HOM05D006025 ORTHO05D008547 3.4e-88 329.3 257 69.3
FAN22G0508 Fragaria x ananassa HOM05D006025 ORTHO05D008547 7.6e-88 328.2 246 71.5
FAN12G1990 Fragaria x ananassa HOM05D006025 ORTHO05D008547 1.3e-87 327.4 244 71.7
Manes.05G096000 Manihot esculenta HOM05D006025 ORTHO05D008547 1.7e-87 327.0 251 67.3
Atru.chr11.1861 Acer truncatum HOM05D006025 ORTHO05D008547 2.2e-87 326.6 349 56.4
FAN07G0827 Fragaria x ananassa HOM05D006025 ORTHO05D008547 3.8e-87 325.9 248 71.0
Thecc.02G232800 Theobroma cacao HOM05D006025 ORTHO05D008547 8.5e-87 324.7 243 70.0
Cfa009042 Carpinus fangiana HOM05D006025 ORTHO05D008547 1.1e-86 324.3 342 55.8
Rhsim12G0129700 Rhododendron simsii HOM05D006025 ORTHO05D008547 2.5e-86 323.2 341 56.9
Haze_12072 Corylus avellana HOM05D006025 ORTHO05D008547 3.2e-86 322.8 302 60.3
Oeu044566.1 Olea europaea HOM05D006025 ORTHO05D008547 4.2e-86 322.4 304 62.2
Migut.L01348 Erythranthe guttata HOM05D006025 ORTHO05D008547 9.3e-86 321.2 344 57.3
Lj6A795T74 Lonicera japonica HOM05D006025 ORTHO05D008547 1.2e-85 320.9 250 68.8
Ciclev10032129m.g Citrus clementina HOM05D006025 ORTHO05D008547 1.6e-85 320.5 350 54.6
Duzib268G1145 Durio zibethinus HOM05D006025 ORTHO05D008547 3.6e-85 319.3 220 74.1
PGR119G0173 Punica granatum HOM05D006025 ORTHO05D008547 3.6e-85 319.3 249 68.7
CiPaw.05G140400 Carya illinoinensis HOM05D006025 ORTHO05D008547 1.3e-84 317.4 340 55.9
vmacro16324 Vaccinium macrocarpon HOM05D006025 ORTHO05D008547 2.3e-84 316.6 382 52.1
GSVIVG01020079001 Vitis vinifera HOM05D006025 ORTHO05D008547 3.9e-84 315.8 235 72.8
Sabra10G0030400 Salix brachista HOM05D006025 ORTHO05D008547 5.1e-84 315.5 248 66.9
Hund25274 Selenicereus undatus HOM05D006025 ORTHO05D008547 6.7e-84 315.1 246 69.1
ClCG05G024630 Citrullus lanatus HOM05D006025 ORTHO05D008547 1.1e-83 314.3 248 68.5
CsaV3_5G032300 Cucumis sativus L. HOM05D006025 ORTHO05D008547 1.5e-83 313.9 252 67.5
Gorai.009G347000 Gossypium raimondii HOM05D006025 ORTHO05D008547 1.9e-83 313.5 255 65.1
MELO3C012062.2 Cucumis melo HOM05D006025 ORTHO05D008547 2.5e-83 313.2 252 67.1
Sc11g0001660 Simmondsia chinensis HOM05D006025 ORTHO05D008547 2.5e-83 313.2 257 68.1
SalBow2G1916 Salvia bowleyana HOM05D006025 ORTHO05D008547 3.3e-83 312.8 257 68.9
CANSAT78G1034 Cannabis sativa HOM05D006025 ORTHO05D008547 5.7e-83 312.0 252 64.3
Eucgr.B02589 Eucalyptus grandis HOM05D006025 ORTHO05D008547 5.7e-83 312.0 215 75.8
Gohir.A05G321100 Gossypium hirsutum HOM05D006025 ORTHO05D008547 7.4e-83 311.6 255 64.7
Potri.010G034400 Populus trichocarpa HOM05D006025 ORTHO05D008547 7.4e-83 311.6 243 67.1
HanXRQChr15g0478181 Helianthus annuus HOM05D006025 ORTHO05D008547 9.7e-83 311.2 258 65.1
Aqoxy3G00786 Aquilegia oxysepala HOM05D006025 ORTHO05D008547 2.2e-82 310.1 237 76.8
Sed0022227 Sechium edule HOM05D006025 ORTHO05D008547 2.2e-82 310.1 248 66.9
Lsat_1_v5_gn_3_49700 Lactuca sativa HOM05D006025 ORTHO05D008547 2.8e-82 309.7 325 54.8
Lj2g0002167 Lotus japonicus HOM05D006025 ORTHO05D008547 2.8e-82 309.7 252 66.3
TWI18G0579 Tripterygium wilfordii HOM05D006025 ORTHO05D008547 4.8e-82 308.9 249 66.7
Gohir.D05G323300 Gossypium hirsutum HOM05D006025 ORTHO05D008547 1.4e-81 307.4 255 63.9
Glyma.01G040500 Glycine max HOM05D006025 ORTHO05D008547 3.1e-81 306.2 256 63.7
Medtr5g037600 Medicago truncatula HOM05D006025 ORTHO05D008547 3.1e-81 306.2 254 64.2
SGA_v2.0_scaffold87G26972 Striga asiatica HOM05D006025 ORTHO05D008547 5.3e-81 305.4 249 71.1
EL10Ac6g13142 Beta vulgaris HOM05D006025 ORTHO05D008547 2.0e-80 303.5 240 69.2
A09p23920 Brassica napus HOM05D006025 ORTHO05D008547 3.4e-80 302.8 259 62.9
BcaC06g31223 Brassica carinata HOM05D006025 ORTHO05D008547 7.7e-80 301.6 260 63.5
CARHR145110 Cardamine hirsuta HOM05D006025 ORTHO05D008547 7.7e-80 301.6 253 68.4
Thhalv10004613m.g Eutrema salsugineum HOM05D006025 ORTHO05D008547 1.0e-79 301.2 253 63.6
Sp2g13810 Schrenkiella parvula HOM05D006025 ORTHO05D008547 1.0e-79 301.2 256 64.1
Phvul.002G080900 Phaseolus vulgaris HOM05D006025 ORTHO05D008547 1.3e-79 300.8 252 63.5
TAR481G0011 Trochodendron aralioides HOM05D006025 ORTHO05D008547 1.3e-79 300.8 255 62.7
AL5G11850 Arabidopsis lyrata HOM05D006025 ORTHO05D008547 1.7e-79 300.4 261 62.8
Carub.0005s0158 Capsella rubella HOM05D006025 ORTHO05D008547 2.2e-79 300.1 263 62.7
VMungo1215G1908 Vigna mungo HOM05D006025 ORTHO05D008547 2.9e-79 299.7 249 63.1
BraA09t37996Z Brassica rapa HOM05D006025 ORTHO05D008547 6.5e-79 298.5 259 62.2
Lalb_Chr05g0217521 Lupinus albus HOM05D006025 ORTHO05D008547 1.1e-78 297.7 244 63.5
AT2G02590 Arabidopsis thaliana HOM05D006025 ORTHO05D008547 1.9e-78 297.0 261 62.1
THA.LOC104805137 Tarenaya hassleriana HOM05D000131 ORTHO05D000086 3.2e-78 296.2 252 63.9
Ca_04692_v3 Cicer arietinum L. HOM05D006025 ORTHO05D008547 4.2e-78 295.8 246 65.4
Aa31LG2G7560 Aethionema arabicum HOM05D006025 ORTHO05D008547 5.5e-78 295.4 260 65.8
Psat2g115440 Pisum sativum HOM05D006025 ORTHO05D008547 5.5e-78 295.4 248 66.9
BcaB07g30697 Brassica carinata HOM05D006025 ORTHO05D008547 7.2e-78 295.0 214 72.9
TPR.G26717 Trifolium pratense HOM05D006025 ORTHO05D008547 7.2e-78 295.0 248 63.7
BcaC06g34048 Brassica carinata HOM05D006025 ORTHO05D008547 1.2e-77 294.3 257 62.6
Cpa.g.sc73.14 Carica papaya HOM05D006025 ORTHO05D008547 1.2e-77 294.3 254 63.4
C07p33300 Brassica napus HOM05D006025 ORTHO05D008547 1.6e-77 293.9 257 62.6
HanXRQChr17g0544581 Helianthus annuus HOM05D006025 ORTHO05D008547 1.6e-77 293.9 255 62.7
C09p30780 Brassica napus HOM05D006025 ORTHO05D008547 2.1e-77 293.5 255 62.4
BolC9t55941H Brassica oleracea HOM05D006025 ORTHO05D008547 4.6e-77 292.4 249 63.5
arahy.Tifrunner.gnm1.ann1.1ZL8TB Arachis hypogaea HOM05D006025 ORTHO05D008547 6.1e-77 292.0 245 64.9
arahy.Tifrunner.gnm1.ann1.V5YJYF Arachis hypogaea HOM05D006025 ORTHO05D008547 7.9e-77 291.6 245 64.9
BolC7t43841H Brassica oleracea HOM05D006025 ORTHO05D008547 1.0e-76 291.2 230 66.5
BcaC04g21520 Brassica carinata HOM05D006025 ORTHO05D008547 2.3e-76 290.0 246 63.4
A06p43550 Brassica napus HOM05D006025 ORTHO05D008547 3.0e-76 289.7 254 62.2
BraA06t27240Z Brassica rapa HOM05D006025 ORTHO05D008547 3.9e-76 289.3 254 62.2
DCAR_024490 Daucus carota HOM05D006025 ORTHO05D008547 1.1e-75 287.7 211 73.0
Nn4g23031 Nelumbo nucifera HOM05D006025 ORTHO05D008547 2.6e-75 286.6 258 62.8
PSO478G1322 Papaver somniferum HOM05D006025 ORTHO05D008547 1.1e-73 281.2 257 60.3
Ah.03g132040 Amaranthus hybridus HOM05D006025 ORTHO05D008547 5.3e-73 278.9 234 65.4
AUR62026262 Chenopodium quinoa HOM05D006025 ORTHO05D008547 9.1e-73 278.1 206 71.4
MBI04_g22196_MAGBIO Magnolia biondii HOM05D006025 ORTHO05D008547 1.5e-72 277.3 199 70.4
CSS0050443 Camellia sinensis var. sinensis HOM05D006025 ORTHO05D008547 2.0e-72 276.9 198 72.7
unitig_62.g23684 Utricularia gibba HOM05D006025 ORTHO05D008547 2.6e-72 276.6 289 54.7
ATR0665G167 Amborella trichopoda HOM05D006025 ORTHO05D008547 6.5e-71 271.9 242 62.4
Os03g0800500 Oryza sativa ssp. japonica HOM05D006025 ORTHO05D008547 2.5e-70 270.0 203 69.5
ECA246G2177 Erigeron canadensis HOM05D006025 ORTHO05D008547 9.4e-70 268.1 206 68.9
AUR62026454 Chenopodium quinoa HOM05D006025 ORTHO05D008547 1.4e-68 264.2 218 67.9
Zm00001eb212770 Zea mays HOM05D006025 ORTHO05D008547 1.0e-60 238.0 199 65.3
SEGI_16485 Sequoiadendron giganteum HOM05D006025 ORTHO05D008547 3.5e-56 223.0 226 52.2
Mapoly0001s0092 Marchantia polymorpha HOM05D006025 ORTHO05D008547 5.5e-54 215.7 211 53.1
CBR_g39595 Chara braunii HOM05D006025 ORTHO05D008547 3.0e-52 209.9 202 53.0
AagrBONN_evm.TU.Sc2ySwM_117.678 Anthoceros agrestis HOM05D006025 ORTHO05D008547 6.8e-52 208.8 223 51.1
CDE07G0470 Ceratophyllum demersum HOM05D006025 ORTHO05D008547 6.8e-52 208.8 290 45.5
SMO147G0037 Selaginella moellendorffii HOM05D006025 ORTHO05D008547 5.7e-51 205.7 202 52.0
Pp3c22_2360 Physcomitrium patens HOM05D006025 ORTHO05D008547 9.1e-49 198.4 225 48.9
HPP92_018837 Vanilla planifolia HOM05D006025 ORTHO05D008547 2.6e-43 180.3 150 62.7
Glyma.02G024100 Glycine max HOM05D006025 ORTHO05D008547 4.1e-33 146.4 139 56.8
Solyc05g006965.1 Solanum lycopersicum HOM05D006025 ORTHO05D008547 3.3e-30 136.7 180 58.3
SEGI_34054 Sequoiadendron giganteum HOM05D006025 ORTHO05D008547 3.9e-23 113.2 86 62.8
CDE06G2488 Ceratophyllum demersum HOM05D006025 ORTHO05D008547 2.1e-21 107.5 177 37.3
Hma1.2p1_0513F.1_g169540 Hydrangea macrophylla HOM05D006025 ORTHO05D008547 4.9e-18 96.3 76 71.1
Hma1.2p1_0808F.1_g221580 Hydrangea macrophylla HOM05D006025 ORTHO05D008547 4.9e-18 96.3 65 76.9
Zm00001eb151370 Zea mays HOM05D006025 ORTHO05D443914 1.4e-09 68.2 67 61.2


User provided reference genes

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