Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0002967g0020 Nicotiana tabacum HOM05D003687 ORTHO05D004571 1.3e-188 662.9 340 100.0
Nitab4.5_0000702g0080 Nicotiana tabacum HOM05D003687 ORTHO05D004571 1.8e-169 599.4 439 75.4
Sopen02g027630 Solanum pennellii HOM05D003687 ORTHO05D004571 7.2e-155 550.8 439 69.7
PGSC0003DMG400001524 Solanum tuberosum HOM05D003687 ORTHO05D004571 6.1e-154 547.7 439 69.7
Solyc02g082830.3 Solanum lycopersicum HOM05D003687 ORTHO05D004571 3.1e-150 535.4 439 68.8
Cc07_g11670 Coffea canephora HOM05D003687 ORTHO05D004571 5.4e-134 481.5 437 62.9
Haze_03674 Corylus avellana HOM05D003687 ORTHO05D004571 1.5e-131 473.4 375 70.4
PSO063G5755 Papaver somniferum HOM05D003687 ORTHO05D004571 5.6e-131 471.5 439 60.6
PSO339G2900 Papaver somniferum HOM05D003687 ORTHO05D004571 2.1e-130 469.5 439 60.8
CSS0042676 Camellia sinensis var. sinensis HOM05D003687 ORTHO05D004571 1.5e-128 463.4 438 59.4
Oeu028610.1 Olea europaea HOM05D003687 ORTHO05D004571 2.2e-127 459.5 438 60.5
Lsat_1_v5_gn_8_23040 Lactuca sativa HOM05D003687 ORTHO05D004571 2.9e-127 459.1 438 59.4
Psat0s1725g0080 Pisum sativum HOM05D003687 ORTHO05D004571 3.2e-126 455.7 424 60.4
MSTRG.3621 Avicennia marina HOM05D003687 ORTHO05D004571 1.6e-125 453.4 442 59.0
Medtr8g074010 Medicago truncatula HOM05D003687 ORTHO05D004571 1.6e-125 453.4 442 59.5
TPR.G18309 Trifolium pratense HOM05D003687 ORTHO05D004571 2.7e-125 452.6 429 59.9
Ca_19449_v3 Cicer arietinum L. HOM05D003687 ORTHO05D004571 3.5e-125 452.2 432 60.0
Lalb_Chr16g0377261 Lupinus albus HOM05D003687 ORTHO05D004571 4.6e-125 451.8 437 59.7
Hma1.2p1_0300F.1_g118150 Hydrangea macrophylla HOM05D003687 ORTHO05D004571 6.0e-125 451.4 442 58.8
Hma1.2p1_2491F.1_g323220 Hydrangea macrophylla HOM05D003687 ORTHO05D004571 6.0e-125 451.4 442 59.3
Cpa.g.sc535.4 Carica papaya HOM05D003687 ORTHO05D004571 7.8e-125 451.1 436 59.6
FvH4_1g10530 Fragaria vesca HOM05D003687 ORTHO05D004571 7.8e-125 451.1 441 59.6
FAN19G1222 Fragaria x ananassa HOM05D003687 ORTHO05D004571 7.8e-125 451.1 441 59.6
CiPaw.08G180600 Carya illinoinensis HOM05D003687 ORTHO05D004571 1.0e-124 450.7 434 59.7
CiPaw.07G004000 Carya illinoinensis HOM05D003687 ORTHO05D004571 1.3e-124 450.3 436 59.9
Cfa007065 Carpinus fangiana HOM05D003687 ORTHO05D004571 8.6e-124 447.6 443 59.6
Lalb_Chr05g0211911 Lupinus albus HOM05D003687 ORTHO05D004571 8.6e-124 447.6 438 59.6
CANSAT25G3704 Cannabis sativa HOM05D003687 ORTHO05D004571 1.5e-123 446.8 440 60.2
RcHm_v2.0_Chr2g0097441 Rosa chinensis HOM05D003687 ORTHO05D004571 1.5e-123 446.8 441 59.4
SalBow3G3833 Salvia bowleyana HOM05D003687 ORTHO05D004571 1.5e-123 446.8 427 59.5
ClCG10G000330 Citrullus lanatus HOM05D003687 ORTHO05D004571 1.9e-123 446.4 442 59.7
FAN28G1596 Fragaria x ananassa HOM05D003687 ORTHO05D004571 1.9e-123 446.4 395 61.8
Lalb_Chr09g0321291 Lupinus albus HOM05D003687 ORTHO05D004571 2.5e-123 446.0 438 57.8
Potri.005G099900 Populus trichocarpa HOM05D003687 ORTHO05D004571 2.5e-123 446.0 434 58.8
QL06p053788 Quercus lobata HOM05D003687 ORTHO05D004571 3.3e-123 445.7 439 58.8
SGA_v2.0_scaffold2G00959 Striga asiatica HOM05D003687 ORTHO05D004571 4.3e-123 445.3 436 57.8
FAN23G1902 Fragaria x ananassa HOM05D003687 ORTHO05D004571 5.6e-123 444.9 393 61.8
QL06p052789 Quercus lobata HOM05D003687 ORTHO05D004571 5.6e-123 444.9 439 58.3
Sabra05G0082600 Salix brachista HOM05D003687 ORTHO05D004571 7.3e-123 444.5 435 58.6
Lj2g0026838 Lotus japonicus HOM05D003687 ORTHO05D004571 1.6e-122 443.4 393 62.1
FAN26G2468 Fragaria x ananassa HOM05D003687 ORTHO05D004571 2.1e-122 443.0 389 62.2
SGA_v2.0_scaffold108G30984 Striga asiatica HOM05D003687 ORTHO05D004571 2.1e-122 443.0 437 57.0
Carub.0007s0467 Capsella rubella HOM05D003687 ORTHO05D004571 2.8e-122 442.6 434 58.3
Manes.02G112800 Manihot esculenta HOM05D003687 ORTHO05D004571 2.8e-122 442.6 434 58.5
Rhsim10G0197900 Rhododendron simsii HOM05D003687 ORTHO05D004571 2.8e-122 442.6 438 56.6
PGR119G1501 Punica granatum HOM05D003687 ORTHO05D004571 3.6e-122 442.2 436 57.6
Migut.H02194 Erythranthe guttata HOM05D003687 ORTHO05D004571 8.1e-122 441.0 435 58.6
Duzib147G1246 Durio zibethinus HOM05D003687 ORTHO05D004571 1.1e-121 440.7 443 58.2
MD15G1233200 Malus domestica HOM05D003687 ORTHO05D004571 1.1e-121 440.7 440 58.9
Sp3g30960 Schrenkiella parvula HOM05D003687 ORTHO05D004571 1.1e-121 440.7 434 57.6
AT4G35630 Arabidopsis thaliana HOM05D003687 ORTHO05D004571 1.4e-121 440.3 434 58.5
Thhalv10025259m.g Eutrema salsugineum HOM05D003687 ORTHO05D004571 1.4e-121 440.3 434 58.1
Thecc.01G007000 Theobroma cacao HOM05D003687 ORTHO05D004571 1.4e-121 440.3 439 58.1
BraA08t34133Z Brassica rapa HOM05D003687 ORTHO05D004571 2.3e-121 439.5 440 58.4
THA.LOC104807434 Tarenaya hassleriana HOM05D003687 ORTHO05D004571 2.3e-121 439.5 434 58.3
Aa31LG8G14900 Aethionema arabicum HOM05D003687 ORTHO05D004571 3.1e-121 439.1 434 57.8
TAR628G0600 Trochodendron aralioides HOM05D003687 ORTHO05D004571 3.1e-121 439.1 438 58.0
MD02G1119200 Malus domestica HOM05D003687 ORTHO05D004571 4.0e-121 438.7 439 59.0
Sp7g33400 Schrenkiella parvula HOM05D003687 ORTHO05D004571 6.8e-121 438.0 437 58.1
AL7G15520 Arabidopsis lyrata HOM05D003687 ORTHO05D004571 8.9e-121 437.6 434 57.6
A08p21800 Brassica napus HOM05D003687 ORTHO05D004571 8.9e-121 437.6 439 57.9
Prupe.7G180700 Prunus persica HOM05D003687 ORTHO05D004571 8.9e-121 437.6 439 58.3
Gohir.D07G177500 Gossypium hirsutum HOM05D003687 ORTHO05D004571 1.5e-120 436.8 436 58.9
Sc07g0001320 Simmondsia chinensis HOM05D003687 ORTHO05D004571 1.5e-120 436.8 418 59.1
AT2G17630 Arabidopsis thaliana HOM05D003687 ORTHO05D004571 2.0e-120 436.4 434 57.8
BcaC01g00508 Brassica carinata HOM05D003687 ORTHO05D004571 2.0e-120 436.4 440 57.7
C03p80790 Brassica napus HOM05D003687 ORTHO05D004571 2.0e-120 436.4 440 57.7
Thhalv10023021m.g Eutrema salsugineum HOM05D003687 ORTHO05D004571 2.0e-120 436.4 434 58.5
TAR376G1076 Trochodendron aralioides HOM05D003687 ORTHO05D004571 2.0e-120 436.4 445 57.5
BolC3t20334H Brassica oleracea HOM05D003687 ORTHO05D004571 2.6e-120 436.0 440 57.7
BcaB07g31719 Brassica carinata HOM05D003687 ORTHO05D004571 3.4e-120 435.6 434 57.6
Gorai.001G198400 Gossypium raimondii HOM05D003687 ORTHO05D004571 3.4e-120 435.6 436 58.7
A09p11460 Brassica napus HOM05D003687 ORTHO05D004571 4.4e-120 435.3 436 57.3
Glyma.02G041900 Glycine max HOM05D003687 ORTHO05D004571 7.6e-120 434.5 426 57.3
Gohir.A07G170700 Gossypium hirsutum HOM05D003687 ORTHO05D004571 7.6e-120 434.5 436 58.5
BraA09t36786Z Brassica rapa HOM05D003687 ORTHO05D004571 9.9e-120 434.1 436 57.6
Atru.chr3.957 Acer truncatum HOM05D003687 ORTHO05D004571 1.3e-119 433.7 437 56.8
Aqoxy1G00525 Aquilegia oxysepala HOM05D003687 ORTHO05D004571 1.3e-119 433.7 431 57.3
CARHR243980 Cardamine hirsuta HOM05D003687 ORTHO05D004571 1.3e-119 433.7 437 57.7
CsaV3_3G000370 Cucumis sativus L. HOM05D003687 ORTHO05D004571 1.3e-119 433.7 441 57.4
Carub.0003s3171 Capsella rubella HOM05D003687 ORTHO05D004571 2.2e-119 433.0 435 57.9
TPR.G25131 Trifolium pratense HOM05D003687 ORTHO05D004571 2.2e-119 433.0 434 58.8
Atru.chr3.969 Acer truncatum HOM05D003687 ORTHO05D004571 2.9e-119 432.6 437 56.8
AL3G50590 Arabidopsis lyrata HOM05D003687 ORTHO05D004571 4.9e-119 431.8 434 57.8
BolC9t54238H Brassica oleracea HOM05D003687 ORTHO05D004571 4.9e-119 431.8 439 57.2
Peaxi162Scf01446g00005 Petunia axillaris HOM05D003687 ORTHO05D004571 4.9e-119 431.8 224 94.2
C09p13480 Brassica napus HOM05D003687 ORTHO05D004571 6.4e-119 431.4 436 57.3
Manes.01G153800 Manihot esculenta HOM05D003687 ORTHO05D004571 6.4e-119 431.4 435 58.2
MELO3C013732.2 Cucumis melo HOM05D003687 ORTHO05D004571 2.4e-118 429.5 438 56.6
Psat2g150440 Pisum sativum HOM05D003687 ORTHO05D004571 3.2e-118 429.1 438 57.3
unitig_699.g19680 Utricularia gibba HOM05D003687 ORTHO05D004571 3.2e-118 429.1 390 59.5
Ah.03g148400 Amaranthus hybridus HOM05D003687 ORTHO05D004571 4.1e-118 428.7 441 55.8
DCAR_030822 Daucus carota HOM05D003687 ORTHO05D004571 4.1e-118 428.7 398 61.3
BcaB03g12420 Brassica carinata HOM05D003687 ORTHO05D004571 5.4e-118 428.3 439 57.2
THA.LOC104819724 Tarenaya hassleriana HOM05D003687 ORTHO05D004571 9.2e-118 427.6 437 56.1
Sed0005072 Sechium edule HOM05D003687 ORTHO05D004571 1.6e-117 426.8 440 58.2
TWI53G1012 Tripterygium wilfordii HOM05D003687 ORTHO05D004571 6.0e-117 424.9 435 55.6
Duzib264G0784 Durio zibethinus HOM05D003687 ORTHO05D004571 7.8e-117 424.5 439 56.5
arahy.Tifrunner.gnm1.ann1.XW297T Arachis hypogaea HOM05D003687 ORTHO05D004571 1.0e-116 424.1 424 59.0
arahy.Tifrunner.gnm1.ann1.ZVTH8F Arachis hypogaea HOM05D003687 ORTHO05D004571 1.0e-116 424.1 424 59.0
Ciclev10025659m.g Citrus clementina HOM05D003687 ORTHO05D004571 1.7e-116 423.3 439 56.0
Lj4P233T12 Lonicera japonica HOM05D003687 ORTHO05D004571 2.3e-116 422.9 385 59.5
Eucgr.I02231 Eucalyptus grandis HOM05D003687 ORTHO05D004571 5.1e-116 421.8 435 56.3
Glyma.11G084400 Glycine max HOM05D003687 ORTHO05D004571 5.1e-116 421.8 413 58.4
TWI09G0502 Tripterygium wilfordii HOM05D003687 ORTHO05D004571 6.6e-116 421.4 362 62.2
Glyma.01G159800 Glycine max HOM05D003687 ORTHO05D004571 8.6e-116 421.0 399 58.9
MBI05_g40602_MAGBIO Magnolia biondii HOM05D003687 ORTHO05D004571 1.1e-115 420.6 442 54.5
COL.COLO4_22538 Corchorus olitorius HOM05D003687 ORTHO05D004571 2.5e-115 419.5 439 55.6
CAN.G890.77 Capsicum annuum HOM05D003687 ORTHO05D004571 7.3e-115 417.9 223 91.5
Phvul.002G115000 Phaseolus vulgaris HOM05D003687 ORTHO05D004571 9.6e-115 417.5 417 57.1
SEGI_09550 Sequoiadendron giganteum HOM05D003687 ORTHO05D004571 1.4e-113 413.7 445 54.2
VMungo1215G1127 Vigna mungo HOM05D003687 ORTHO05D004571 2.4e-113 412.9 417 56.4
ATR0329G002 Amborella trichopoda HOM05D003687 ORTHO05D004571 7.6e-112 407.9 392 57.1
ECA233G3718 Erigeron canadensis HOM05D003687 ORTHO05D004571 3.8e-111 405.6 347 65.7
VMungo0251G3174 Vigna mungo HOM05D003687 ORTHO05D004571 8.4e-111 404.4 423 53.9
BcaC04g22959 Brassica carinata HOM05D003687 ORTHO05D004571 3.2e-110 402.5 223 87.9
CDE10G0671 Ceratophyllum demersum HOM05D003687 ORTHO05D004571 1.2e-109 400.6 361 60.1
Phvul.003G269100 Phaseolus vulgaris HOM05D003687 ORTHO05D004571 1.6e-109 400.2 431 53.8
CDE10G0952 Ceratophyllum demersum HOM05D003687 ORTHO05D004571 6.0e-109 398.3 437 53.3
Ca_24964_v3 Cicer arietinum L. HOM05D003687 ORTHO05D004571 1.0e-108 397.5 225 87.6
EL10Ac6g15469 Beta vulgaris HOM05D003687 ORTHO05D004571 2.3e-108 396.4 375 57.6
AUR62029452 Chenopodium quinoa HOM05D003687 ORTHO05D004571 6.6e-108 394.8 223 85.2
SHI29483 Sapria himalayana HOM05D003687 ORTHO05D004571 2.5e-107 392.9 441 52.4
SMO259G0019 Selaginella moellendorffii HOM05D003687 ORTHO05D004571 2.5e-107 392.9 385 54.5
CBR_g54970 Chara braunii HOM05D003687 ORTHO05D004571 9.6e-107 391.0 368 56.8
CBR_g34176 Chara braunii HOM05D003687 ORTHO05D004571 1.3e-106 390.6 368 56.8
Aa31LG6G12590 Aethionema arabicum HOM05D003687 ORTHO05D004571 1.6e-106 390.2 434 53.5
Os03g0157900 Oryza sativa ssp. japonica HOM05D003687 ORTHO05D004571 2.8e-106 389.4 392 55.4
HPP92_002248 Vanilla planifolia HOM05D003687 ORTHO05D004571 1.4e-105 387.1 386 55.2
Mapoly0033s0118 Marchantia polymorpha HOM05D003687 ORTHO05D004571 1.3e-103 380.6 387 53.2
vmacro20525 Vaccinium macrocarpon HOM05D003687 ORTHO05D004571 2.9e-103 379.4 411 54.0
Pp3c9_15390 Physcomitrium patens HOM05D003687 ORTHO05D004571 1.9e-102 376.7 362 55.5
Zm00001eb004390 Zea mays HOM05D003687 ORTHO05D004571 7.1e-102 374.8 438 50.2
Actinidia17383 Actinidia chinensis HOM05D003687 ORTHO05D004571 1.1e-99 367.5 440 51.8
PRCOL_00000472 Prasinoderma coloniale HOM05D003687 ORTHO05D004571 9.6e-91 337.8 369 49.6
Cre07.g331550 Chlamydomonas reinhardtii HOM05D003687 ORTHO05D004571 5.5e-86 322.0 371 46.6
GSVIVG01006497001 Vitis vinifera HOM05D003687 ORTHO05D004571 6.7e-84 315.1 399 50.1
Dinv40174 Davidia involucrata HOM05D003687 ORTHO05D004571 7.6e-80 301.6 343 55.7
BcaB07g31718 Brassica carinata HOM05D003687 ORTHO05D004571 2.5e-78 296.6 179 82.7
FAN26G0112 Fragaria x ananassa HOM05D003687 ORTHO05D004571 1.2e-77 294.3 207 73.4
MCO11G731 Micromonas commoda HOM05D003687 ORTHO05D004571 5.7e-75 285.4 371 43.7
QL06p053814 Quercus lobata HOM05D003687 ORTHO05D004571 1.1e-73 281.2 219 70.3
QL06p052765 Quercus lobata HOM05D000009 ORTHO05D000008 4.1e-73 279.3 218 69.7
MBI05_g22625_MAGBIO Magnolia biondii HOM05D003687 ORTHO05D004571 3.2e-62 243.0 375 44.0
QL06p052757 Quercus lobata HOM05D003687 ORTHO05D004571 3.7e-58 229.6 221 60.2
CSS0005640 Camellia sinensis var. sinensis HOM05D003687 ORTHO05D004571 1.1e-57 228.0 190 64.7
QL06p052753 Quercus lobata HOM05D003687 ORTHO05D007223 2.4e-57 226.9 175 69.7
SalBow7G3504 Salvia bowleyana HOM05D003687 ORTHO05D004571 1.5e-54 217.6 218 58.7
QL06p053818 Quercus lobata HOM05D003687 ORTHO05D004571 2.1e-53 213.8 163 71.2
Haze_26462 Corylus avellana HOM05D003687 ORTHO05D004571 8.0e-53 211.8 361 36.3
ATR0553G001 Amborella trichopoda HOM05D003687 ORTHO05D004571 1.4e-49 201.1 190 58.4
Dinv17413 Davidia involucrata HOM05D003687 ORTHO05D004571 5.0e-47 192.6 157 65.6
Dinv09926 Davidia involucrata HOM05D003687 ORTHO05D004571 1.9e-46 190.7 157 65.0
SalBow2G1655 Salvia bowleyana HOM05D003687 ORTHO05D004571 2.1e-45 187.2 108 81.5
Dinv37828 Davidia involucrata HOM05D003687 ORTHO05D004571 4.7e-45 186.0 157 64.3
SalBow8G1645 Salvia bowleyana HOM05D003687 ORTHO05D004571 7.5e-43 178.7 108 78.7
BcaB07g31714 Brassica carinata HOM05D003687 ORTHO05D004571 5.4e-41 172.6 147 65.3
Cfa023378 Carpinus fangiana HOM05D003687 ORTHO05D004571 2.0e-40 170.6 233 42.1
Dinv29031 Davidia involucrata HOM05D003687 ORTHO05D034002 5.9e-40 169.1 338 40.5
PRCOL_00006694 Prasinoderma coloniale HOM05D003687 ORTHO05D049027 2.9e-39 166.8 231 40.3
MCO03G424 Micromonas commoda HOM05D003687 ORTHO05D049027 6.5e-39 165.6 225 39.1
SalBow7G4144 Salvia bowleyana HOM05D003687 ORTHO05D004571 1.4e-33 147.9 175 52.0
Dinv34003 Davidia involucrata HOM05D003687 ORTHO05D004571 9.5e-30 135.2 89 75.3
SalBow6G6204 Salvia bowleyana HOM05D003687 ORTHO05D004571 3.6e-29 133.3 78 79.5
HanXRQChr09g0253801 Helianthus annuus HOM05D003687 ORTHO05D004571 4.7e-29 132.9 71 87.3
HanXRQChr02g0050301 Helianthus annuus HOM05D003687 ORTHO05D004571 6.1e-29 132.5 71 85.9
A06p33750 Brassica napus HOM05D003687 ORTHO05D004571 8.0e-29 132.1 218 41.7
RcHm_v2.0_Chr2g0097551 Rosa chinensis HOM05D003687 ORTHO05D004571 1.8e-28 131.0 111 61.3
SalBow6G4873 Salvia bowleyana HOM05D003687 ORTHO05D004571 7.0e-25 119.0 99 59.6
Dinv18127 Davidia involucrata HOM05D003687 ORTHO05D043272 8.9e-20 102.1 63 82.5
BraA06t26310Z Brassica rapa HOM05D003687 ORTHO05D043272 4.4e-19 99.8 65 84.6
SEGI_08881 Sequoiadendron giganteum HOM05D003687 ORTHO05D004571 6.4e-18 95.9 79 59.5
ATR0208G001 Amborella trichopoda HOM05D003687 ORTHO05D067511 3.2e-17 93.6 65 72.3
RcHm_v2.0_Chr2g0097541 Rosa chinensis HOM05D003687 ORTHO05D004571 9.2e-17 92.0 126 51.6
ATR0329G021 Amborella trichopoda HOM05D003687 ORTHO05D004571 1.8e-12 77.8 55 70.9
ATR0763G123 Amborella trichopoda HOM05D003687 ORTHO05D004571 2.2e-10 70.9 60 61.7
Psat6g182000 Pisum sativum HOM05D002062 ORTHO05D002242 2.2e-10 70.9 50 68.0
Psat3g043760 Pisum sativum HOM05D003687 ORTHO05D018418 1.6e-08 64.7 37 78.4
TAR371G0743 Trochodendron aralioides HOM05D003687 ORTHO05D006936 4.6e-08 63.2 60 53.3
ATR0199G031 Amborella trichopoda HOM05D003687 ORTHO05D004571 5.1e-07 59.7 122 38.5
ATR0749G088 Amborella trichopoda HOM05D003687 ORTHO05D004571 4.3e-06 56.6 145 32.4
Actinidia22909 Actinidia chinensis HOM05D003687 ORTHO05D057990 7.3e-06 55.8 55 60.0


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