Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0002964g0020 Nicotiana tabacum HOM05D006504 ORTHO05D007867 2.2e-66 256.1 200 100.0
Sopen02g018660 Solanum pennellii HOM05D006504 ORTHO05D007867 8.9e-20 101.3 130 90.0
Solyc02g069520.2 Solanum lycopersicum HOM05D006504 ORTHO05D007867 1.3e-18 97.4 140 83.6
CAN.G675.25 Capsicum annuum HOM05D006504 ORTHO05D007867 4.6e-16 89.0 135 74.8
MSTRG.22579 Avicennia marina HOM05D006504 ORTHO05D007867 1.7e-15 87.0 133 50.4
Rhsim12G0206400 Rhododendron simsii HOM05D006504 ORTHO05D007867 3.3e-14 82.8 129 87.6
CSS0018438 Camellia sinensis var. sinensis HOM05D006504 ORTHO05D007867 1.4e-12 77.4 130 77.7
Migut.I01030 Erythranthe guttata HOM05D006504 ORTHO05D007867 1.8e-12 77.0 127 62.2
Lsat_1_v5_gn_5_135100 Lactuca sativa HOM05D006504 ORTHO05D007867 2.4e-12 76.6 127 71.7
Cpa.g.sc25.42 Carica papaya HOM05D006504 ORTHO05D007867 2.0e-11 73.6 127 77.2
HanXRQChr12g0360501 Helianthus annuus HOM05D006504 ORTHO05D007867 2.0e-11 73.6 127 73.2
Peaxi162Scf00195g00313 Petunia axillaris HOM05D006504 ORTHO05D007867 3.4e-11 72.8 135 80.7
SGA_v2.0_scaffold127G34055 Striga asiatica HOM05D006504 ORTHO05D007867 1.7e-10 70.5 137 56.9
Gorai.009G141600 Gossypium raimondii HOM05D006504 ORTHO05D007867 4.9e-10 68.9 127 70.9
Hma1.2p1_0388F.1_g142400 Hydrangea macrophylla HOM05D006504 ORTHO05D007867 6.4e-10 68.6 130 66.2
Thecc.06G112500 Theobroma cacao HOM05D006504 ORTHO05D007867 1.1e-09 67.8 123 60.2
Gohir.A05G135200 Gossypium hirsutum HOM05D006504 ORTHO05D007867 1.4e-09 67.4 127 70.1
GSVIVG01016863001 Vitis vinifera HOM05D006504 ORTHO05D007867 3.2e-09 66.2 128 62.5
Gohir.D05G137200 Gossypium hirsutum HOM05D006504 ORTHO05D007867 4.1e-09 65.9 127 70.1
Duzib235G1492 Durio zibethinus HOM05D006504 ORTHO05D007867 9.2e-09 64.7 123 64.2
SalBow6G4228 Salvia bowleyana HOM05D006504 ORTHO05D007867 2.1e-08 63.5 35 80.0
SalBow6G4685 Salvia bowleyana HOM05D006504 ORTHO05D007867 2.1e-08 63.5 35 80.0
unitig_748.g8021 Utricularia gibba HOM05D000360 ORTHO05D000234 2.7e-08 63.2 39 69.2
Potri.003G037200 Populus trichocarpa HOM05D006504 ORTHO05D007867 3.5e-08 62.8 123 71.5
Manes.04G140200 Manihot esculenta HOM05D006504 ORTHO05D007867 4.6e-08 62.4 128 68.8
PGR102G0591 Punica granatum HOM05D006504 ORTHO05D007867 4.6e-08 62.4 131 55.7
RcHm_v2.0_Chr2g0143361 Rosa chinensis HOM05D006504 ORTHO05D007867 7.8e-08 61.6 121 63.6
Eucgr.F03135 Eucalyptus grandis HOM05D006504 ORTHO05D007867 1.3e-07 60.8 132 59.1
Atru.chr1.3757 Acer truncatum HOM05D006504 ORTHO05D007867 2.3e-07 60.1 129 76.7
Ciclev10026403m.g Citrus clementina HOM05D006504 ORTHO05D007867 6.6e-07 58.5 131 54.2
Manes.11G025900 Manihot esculenta HOM05D006504 ORTHO05D007867 6.6e-07 58.5 128 70.3
FAN02G0681 Fragaria x ananassa HOM05D006504 ORTHO05D007867 1.9e-06 57.0 123 51.2
Gohir.A10G058600 Gossypium hirsutum HOM05D006504 ORTHO05D007867 2.5e-06 56.6 123 42.3
FAN09G0296 Fragaria x ananassa HOM05D006504 ORTHO05D007867 7.3e-06 55.1 123 40.7
A08p01030 Brassica napus HOM05D001264 ORTHO05D007867 9.6e-06 54.7 37 67.6
BraA08t32155Z Brassica rapa HOM05D006504 ORTHO05D007867 9.6e-06 54.7 37 67.6


User provided reference genes

Program Settings