Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0002963g0090 Nicotiana tabacum HOM05D000204 ORTHO05D003771 1.2e-38 162.5 75 100.0
Nitab4.5_0000101g0320 Nicotiana tabacum HOM05D000204 ORTHO05D003771 2.1e-22 108.6 51 90.2
CAN.G622.8 Capsicum annuum HOM05D000204 ORTHO05D003771 4.8e-19 97.4 52 80.8
Peaxi162Scf00123g01125 Petunia axillaris HOM05D000204 ORTHO05D003771 1.1e-18 96.3 55 74.5
Solyc09g007970.3 Solanum lycopersicum HOM05D000204 ORTHO05D003771 4.2e-15 84.3 71 54.9
PGSC0003DMG400021565 Solanum tuberosum HOM05D000204 ORTHO05D003771 9.4e-15 83.2 71 53.5
Peaxi162Scf00488g00064 Petunia axillaris HOM05D000204 ORTHO05D003771 2.7e-14 81.6 51 64.7
CAN.G509.14 Capsicum annuum HOM05D000057 ORTHO05D003771 4.4e-12 74.3 73 45.2
CiPaw.09G174100 Carya illinoinensis HOM05D000204 ORTHO05D003771 7.5e-12 73.6 44 63.6
GSVIVG01025708001 Vitis vinifera HOM05D000204 ORTHO05D003771 4.8e-11 70.9 46 58.7
MELO3C014219.2 Cucumis melo HOM05D000204 ORTHO05D003771 2.4e-10 68.6 51 52.9
ClCG04G009170 Citrullus lanatus HOM05D000204 ORTHO05D003771 3.1e-10 68.2 51 52.9
MSTRG.5752 Avicennia marina HOM05D000057 ORTHO05D003771 7.0e-10 67.0 45 57.8
Rhsim04G0145000 Rhododendron simsii HOM05D000204 ORTHO05D003771 9.1e-10 66.6 47 61.7
MD04G1095800 Malus domestica HOM05D000204 ORTHO05D003771 2.0e-09 65.5 53 50.9
Sed0026948 Sechium edule HOM05D000204 ORTHO05D003771 2.0e-09 65.5 69 42.0
QL07p044058 Quercus lobata HOM05D000204 ORTHO05D003771 3.5e-09 64.7 46 56.5
MD12G1115800 Malus domestica HOM05D000204 ORTHO05D003771 4.5e-09 64.3 53 45.3
Manes.09G064000 Manihot esculenta HOM05D000204 ORTHO05D003771 5.9e-09 63.9 46 54.3
Nitab4.5_0000754g0310 Nicotiana tabacum HOM05D000204 ORTHO05D003771 1.7e-08 62.4 51 56.9
Solyc10g086200.1 Solanum lycopersicum HOM05D000057 ORTHO05D003771 2.2e-08 62.0 74 41.9
TAR636G1559 Trochodendron aralioides HOM05D000204 ORTHO05D003771 5.0e-08 60.8 53 49.1
TAR636G2405 Trochodendron aralioides HOM05D000204 ORTHO05D003771 5.0e-08 60.8 53 49.1
Lalb_Chr01g0018731 Lupinus albus HOM05D000204 ORTHO05D003771 6.5e-08 60.5 46 52.2
Manes.08G008700 Manihot esculenta HOM05D000204 ORTHO05D003771 6.5e-08 60.5 45 53.3
Thecc.05G063000 Theobroma cacao HOM05D000204 ORTHO05D003771 6.5e-08 60.5 45 48.9
Lj2P115T39 Lonicera japonica HOM05D000204 ORTHO05D003771 1.1e-07 59.7 73 42.5
Prupe.6G234900 Prunus persica HOM05D000204 ORTHO05D003771 1.5e-07 59.3 48 47.9
PGSC0003DMG400031363 Solanum tuberosum HOM05D000057 ORTHO05D003771 1.9e-07 58.9 72 40.3
Duzib128G1331 Durio zibethinus HOM05D000204 ORTHO05D003771 3.2e-07 58.2 49 49.0
Nn2g13730 Nelumbo nucifera HOM05D000204 ORTHO05D003771 4.2e-07 57.8 54 46.3
Lj5g0019447 Lotus japonicus HOM05D000204 ORTHO05D003771 9.4e-07 56.6 49 49.0
THA.LOC104823459 Tarenaya hassleriana HOM05D000204 ORTHO05D003771 2.7e-06 55.1 47 48.9
THA.LOC104806489 Tarenaya hassleriana HOM05D000204 ORTHO05D003771 4.7e-06 54.3 50 46.0


User provided reference genes

Program Settings