Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0002958g0020 Nicotiana tabacum HOM05D012176 ORTHO05D014468 8.3e-157 557.0 280 100.0
Nitab4.5_0000020g0110 Nicotiana tabacum HOM05D012176 ORTHO05D014468 4.6e-139 498.0 282 90.8
PGSC0003DMG400016421 Solanum tuberosum HOM05D012176 ORTHO05D014468 5.5e-84 315.1 286 60.8
Sopen01g003190 Solanum pennellii HOM05D012176 ORTHO05D014468 1.5e-44 184.1 152 57.2
CAN.G574.24 Capsicum annuum HOM05D012176 ORTHO05D014468 4.4e-25 119.4 156 39.1
Oeu055534.1 Olea europaea HOM05D012176 ORTHO05D014468 4.9e-24 115.9 185 31.9
Oeu050407.1 Olea europaea HOM05D012176 ORTHO05D014468 8.4e-24 115.2 265 28.7
SGA_v2.0_scaffold31G12844 Striga asiatica HOM05D012176 ORTHO05D014468 2.5e-20 103.6 258 27.9
MSTRG.5900 Avicennia marina HOM05D012176 ORTHO05D014468 1.2e-19 101.3 283 26.1
Rhsim03G0065900 Rhododendron simsii HOM05D008136 ORTHO05D002052 3.6e-19 99.8 248 27.8
PSO384G1068 Papaver somniferum HOM05D002687 ORTHO05D002052 7.6e-17 92.0 266 26.3
Migut.J00709 Erythranthe guttata HOM05D012176 ORTHO05D002052 2.9e-16 90.1 180 31.1
MSTRG.19312 Avicennia marina HOM05D012176 ORTHO05D014468 8.4e-16 88.6 256 23.4
PGSC0003DMG400016432 Solanum tuberosum HOM05D022101 ORTHO05D022209 5.4e-15 85.9 221 26.7
CiPaw.13G131000 Carya illinoinensis HOM05D002687 ORTHO05D002052 1.6e-14 84.3 216 25.0
Nn6g34716 Nelumbo nucifera HOM05D002687 ORTHO05D002052 1.6e-14 84.3 258 24.0
Nn2g14283 Nelumbo nucifera HOM05D002687 ORTHO05D002052 2.7e-14 83.6 209 26.8
TAR633G0261 Trochodendron aralioides HOM05D002687 ORTHO05D002052 7.8e-14 82.0 254 25.2
Cc06_g06470 Coffea canephora HOM05D022101 ORTHO05D022209 1.3e-13 81.3 212 28.3
TAR636G0437 Trochodendron aralioides HOM05D002687 ORTHO05D002052 1.7e-13 80.9 234 26.5
TAR636G3204 Trochodendron aralioides HOM05D002687 ORTHO05D002052 1.7e-13 80.9 234 26.5
Migut.B00865 Erythranthe guttata HOM05D012176 ORTHO05D014468 2.3e-13 80.5 184 26.6
Dinv31752 Davidia involucrata HOM05D002687 ORTHO05D022209 3.0e-13 80.1 178 30.9
BcaB06g28135 Brassica carinata HOM05D002687 ORTHO05D002052 3.9e-13 79.7 215 26.0
Oeu048843.1 Olea europaea HOM05D002687 ORTHO05D002052 6.6e-13 79.0 227 27.3
QL07p036916 Quercus lobata HOM05D008136 ORTHO05D002052 6.6e-13 79.0 263 26.6
Ca_01639_v3 Cicer arietinum L. HOM05D002687 ORTHO05D002052 8.7e-13 78.6 211 26.5
MD00G1129000 Malus domestica HOM05D002687 ORTHO05D002052 8.7e-13 78.6 212 30.7
Actinidia32046 Actinidia chinensis HOM05D000182 ORTHO05D000112 1.1e-12 78.2 200 25.0
ClCG10G018400 Citrullus lanatus HOM05D008136 ORTHO05D002052 1.9e-12 77.4 240 27.5
Manes.11G165500 Manihot esculenta HOM05D002687 ORTHO05D002052 1.9e-12 77.4 211 22.7
Dinv17088 Davidia involucrata HOM05D002687 ORTHO05D002052 3.3e-12 76.6 275 23.3
MSTRG.17685 Avicennia marina HOM05D002687 ORTHO05D002052 5.6e-12 75.9 245 25.3
Sed0011968 Sechium edule HOM05D008136 ORTHO05D002052 5.6e-12 75.9 226 27.0
Aqoxy1G00685 Aquilegia oxysepala HOM05D002687 ORTHO05D002052 9.6e-12 75.1 204 25.0
DCAR_010643 Daucus carota HOM05D002687 ORTHO05D002052 1.3e-11 74.7 199 23.6
Oeu009048.1 Olea europaea HOM05D002687 ORTHO05D002052 1.3e-11 74.7 226 26.5
TAR633G0472 Trochodendron aralioides HOM05D002687 ORTHO05D002052 1.3e-11 74.7 255 21.2
Dinv08137 Davidia involucrata HOM05D002687 ORTHO05D002052 2.1e-11 73.9 264 23.9
BcaC02g08259 Brassica carinata HOM05D002687 ORTHO05D002052 3.6e-11 73.2 217 26.3
C04p56620 Brassica napus HOM05D002687 ORTHO05D002052 3.6e-11 73.2 217 26.3
BolC4t27189H Brassica oleracea HOM05D002687 ORTHO05D002052 3.6e-11 73.2 217 26.3
ATR0772G197 Amborella trichopoda HOM05D002687 ORTHO05D002052 4.8e-11 72.8 186 22.0
HanXRQChr12g0382031 Helianthus annuus HOM05D002687 ORTHO05D002052 4.8e-11 72.8 188 29.3
MD03G1153500 Malus domestica HOM05D002687 ORTHO05D002052 4.8e-11 72.8 212 27.8
Solyc11g068900.1 Solanum lycopersicum HOM05D002687 ORTHO05D002052 4.8e-11 72.8 207 25.6
Sopen01g003200 Solanum pennellii HOM05D022101 ORTHO05D022209 4.8e-11 72.8 196 25.0
Oeu035584.1 Olea europaea HOM05D002687 ORTHO05D002052 6.2e-11 72.4 261 24.5
CiPaw.14G096100 Carya illinoinensis HOM05D002687 ORTHO05D002052 8.1e-11 72.0 233 24.0
Nn2g14281 Nelumbo nucifera HOM05D002687 ORTHO05D002052 8.1e-11 72.0 252 21.4
Medtr2g087000 Medicago truncatula HOM05D002687 ORTHO05D002052 1.1e-10 71.6 209 27.3
QL07p036935 Quercus lobata HOM05D002687 ORTHO05D002052 1.8e-10 70.9 271 23.6
Rhsim13G0195600 Rhododendron simsii HOM05D002687 ORTHO05D002052 1.8e-10 70.9 252 22.2
Sopen11g027610 Solanum pennellii HOM05D002687 ORTHO05D002052 2.4e-10 70.5 206 25.2
ECA238G0184 Erigeron canadensis HOM05D002687 ORTHO05D002052 3.1e-10 70.1 232 23.7
Sabra16G0125800 Salix brachista HOM05D002687 ORTHO05D002052 4.0e-10 69.7 236 26.3
PGSC0003DMG400019632 Solanum tuberosum HOM05D002687 ORTHO05D002052 4.0e-10 69.7 203 24.6
TAR633G1301 Trochodendron aralioides HOM05D002687 ORTHO05D002052 4.0e-10 69.7 261 20.7
BcaB02g10079 Brassica carinata HOM05D002687 ORTHO05D002052 6.9e-10 68.9 205 26.8
BolC3t15541H Brassica oleracea HOM05D002687 ORTHO05D002052 1.2e-09 68.2 213 25.8
CANSAT54G2775 Cannabis sativa HOM05D002687 ORTHO05D002052 1.2e-09 68.2 231 24.2
Potri.006G204000 Populus trichocarpa HOM05D008136 ORTHO05D002052 1.2e-09 68.2 291 21.6
A03p26690 Brassica napus HOM05D002687 ORTHO05D002052 2.0e-09 67.4 206 25.7
BraA03t11881Z Brassica rapa HOM05D002687 ORTHO05D002052 2.0e-09 67.4 208 27.4
Lsat_1_v5_gn_4_57701 Lactuca sativa HOM05D004864 ORTHO05D005393 2.0e-09 67.4 187 28.9
MELO3C009533.2 Cucumis melo HOM05D008136 ORTHO05D002052 2.6e-09 67.0 193 26.4
DCAR_003063 Daucus carota HOM05D008136 ORTHO05D014468 2.6e-09 67.0 240 23.3
Eucgr.A02595 Eucalyptus grandis HOM05D008136 ORTHO05D002052 2.6e-09 67.0 226 23.0
SGA_v2.0_scaffold637G53306 Striga asiatica HOM05D002687 ORTHO05D002052 2.6e-09 67.0 212 25.0
MBI01_g04539_MAGBIO Magnolia biondii HOM05D002687 ORTHO05D002052 4.4e-09 66.2 239 23.4
TWI79G0900 Tripterygium wilfordii HOM05D002687 ORTHO05D002052 4.4e-09 66.2 162 23.5
arahy.Tifrunner.gnm1.ann1.N0JQU4 Arachis hypogaea HOM05D002687 ORTHO05D002052 5.8e-09 65.9 169 25.4
Eucgr.J00543 Eucalyptus grandis HOM05D002687 ORTHO05D002052 7.6e-09 65.5 217 23.5
Prupe.6G142400 Prunus persica HOM05D002687 ORTHO05D002052 7.6e-09 65.5 210 24.3
Atru.chr3.3136 Acer truncatum HOM05D002687 ORTHO05D002052 9.9e-09 65.1 243 23.0
Medtr4g051652 Medicago truncatula HOM05D002687 ORTHO05D002052 9.9e-09 65.1 186 26.9
Potri.009G019800 Populus trichocarpa HOM05D002687 ORTHO05D002052 9.9e-09 65.1 237 24.9
Sabra06G0157200 Salix brachista HOM05D008136 ORTHO05D002052 1.3e-08 64.7 169 23.1
unitig_8.g3658 Utricularia gibba HOM05D002687 ORTHO05D002052 1.3e-08 64.7 206 29.1
MELO3C025576.2 Cucumis melo HOM05D002687 ORTHO05D034712 1.7e-08 64.3 182 26.9
TPR.G4231 Trifolium pratense HOM05D002687 ORTHO05D002052 1.7e-08 64.3 211 24.2
BolC4t23929H Brassica oleracea HOM05D002687 ORTHO05D002052 2.2e-08 63.9 180 23.9
Potri.001G218300 Populus trichocarpa HOM05D002687 ORTHO05D002052 2.9e-08 63.5 227 25.1
Cpa.g.sc104.46 Carica papaya HOM05D002687 ORTHO05D002052 4.9e-08 62.8 254 22.8
BcaC02g10865 Brassica carinata HOM05D002687 ORTHO05D002052 6.4e-08 62.4 226 23.9
C04p24310 Brassica napus HOM05D002687 ORTHO05D002052 6.4e-08 62.4 226 23.9
CsaV3_3G037890 Cucumis sativus L. HOM05D008136 ORTHO05D002052 6.4e-08 62.4 206 24.8
SGA_v2.0_scaffold100G29631 Striga asiatica HOM05D002687 ORTHO05D002052 6.4e-08 62.4 214 24.8
Thecc.05G103000 Theobroma cacao HOM05D008136 ORTHO05D002052 1.9e-07 60.8 234 26.1
Aqoxy1G00677 Aquilegia oxysepala HOM05D002687 ORTHO05D002052 3.2e-07 60.1 222 22.5
Cpa.g.sc1142.1 Carica papaya HOM05D002687 ORTHO05D002052 3.2e-07 60.1 168 24.4
SGA_v2.0_scaffold295G47489 Striga asiatica HOM05D002687 ORTHO05D002052 3.2e-07 60.1 242 24.0
arahy.Tifrunner.gnm1.ann1.UY1REM Arachis hypogaea HOM05D002687 ORTHO05D002052 5.4e-07 59.3 179 24.0
RcHm_v2.0_Chr3g0475771 Rosa chinensis HOM05D010052 ORTHO05D010666 5.4e-07 59.3 186 25.3
BcaC01g04930 Brassica carinata HOM05D002687 ORTHO05D002052 7.1e-07 58.9 192 24.5
CARHR162230 Cardamine hirsuta HOM05D008136 ORTHO05D002052 7.1e-07 58.9 233 21.5
Duzib192G0146 Durio zibethinus HOM05D004864 ORTHO05D005393 7.1e-07 58.9 184 24.5
Solyc06g074050.3 Solanum lycopersicum HOM05D002687 ORTHO05D002052 7.1e-07 58.9 159 25.8
Solyc11g068893.1 Solanum lycopersicum HOM05D002687 ORTHO05D002052 7.1e-07 58.9 162 28.4
TWI63G0675 Tripterygium wilfordii HOM05D004864 ORTHO05D005393 9.3e-07 58.5 173 25.4
C03p31980 Brassica napus HOM05D002687 ORTHO05D002052 1.2e-06 58.2 213 24.4
TWI38G2287 Tripterygium wilfordii HOM05D004864 ORTHO05D005393 1.2e-06 58.2 156 26.9
HanXRQChr15g0473381 Helianthus annuus HOM05D004864 ORTHO05D005393 3.5e-06 56.6 202 21.8
Sopen06g030470 Solanum pennellii HOM05D002687 ORTHO05D002052 3.5e-06 56.6 209 25.4
Gohir.A06G208200 Gossypium hirsutum HOM05D004864 ORTHO05D005393 4.6e-06 56.2 158 26.6
Gorai.010G253200 Gossypium raimondii HOM05D004864 ORTHO05D005393 6.0e-06 55.8 158 27.2
Potri.006G204300 Populus trichocarpa HOM05D000980 ORTHO05D000649 6.0e-06 55.8 168 23.2
Sc12g0004850 Simmondsia chinensis HOM05D002687 ORTHO05D002052 6.0e-06 55.8 222 23.4
TPR.G4667 Trifolium pratense HOM05D002687 ORTHO05D002052 6.0e-06 55.8 186 25.3
Ciclev10013405m.g Citrus clementina HOM05D008136 ORTHO05D002052 7.9e-06 55.5 243 25.1
THA.LOC104826444 Tarenaya hassleriana HOM05D002687 ORTHO05D002052 7.9e-06 55.5 167 25.1


User provided reference genes

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