Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0002958g0010 Nicotiana tabacum HOM05D019826 ORTHO05D022411 3.6e-129 464.9 232 100.0
Nitab4.5_0000020g0100 Nicotiana tabacum HOM05D019826 ORTHO05D022411 6.2e-81 304.7 261 67.0
PGSC0003DMG400016422 Solanum tuberosum HOM05D019826 ORTHO05D022411 4.6e-36 155.6 239 49.0
Solyc01g007200.2 Solanum lycopersicum HOM05D019826 ORTHO05D022411 1.3e-27 127.5 243 44.4
Sopen01g003180 Solanum pennellii HOM05D019826 ORTHO05D022411 1.2e-23 114.4 244 41.4
Hma1.2p1_0079F.1_g041880 Hydrangea macrophylla HOM05D009231 ORTHO05D010800 8.2e-17 91.7 252 33.7
Actinidia32045 Actinidia chinensis HOM05D009231 ORTHO05D010800 2.5e-13 80.1 224 33.0
Thecc.05G103300 Theobroma cacao HOM05D009231 ORTHO05D010800 2.5e-13 80.1 248 33.9
Cfa021528 Carpinus fangiana HOM05D009231 ORTHO05D010800 2.7e-12 76.6 224 34.4
Dinv31754 Davidia involucrata HOM05D009231 ORTHO05D010800 6.1e-12 75.5 216 35.2
CiPaw.09G020600 Carya illinoinensis HOM05D007097 ORTHO05D008131 2.3e-11 73.6 247 30.8
Gohir.A01G201800 Gossypium hirsutum HOM05D009231 ORTHO05D010800 3.0e-11 73.2 236 33.9
Gorai.002G235600 Gossypium raimondii HOM05D009231 ORTHO05D010800 3.9e-11 72.8 235 33.6
TAR636G0160 Trochodendron aralioides HOM05D009231 ORTHO05D010800 6.7e-11 72.0 239 31.0
Haze_07057 Corylus avellana HOM05D009231 ORTHO05D010800 4.4e-10 69.3 224 32.1
Actinidia03894 Actinidia chinensis HOM05D009231 ORTHO05D010800 2.8e-09 66.6 222 31.1
GSVIVG01033951001 Vitis vinifera HOM05D009231 ORTHO05D010800 2.8e-09 66.6 271 29.9
Gohir.D01G191700 Gossypium hirsutum HOM05D009231 ORTHO05D010800 3.7e-09 66.2 218 34.4
Nn2g14291 Nelumbo nucifera HOM05D009231 ORTHO05D010800 3.7e-09 66.2 232 31.0
MD12G1039600 Malus domestica HOM05D015804 ORTHO05D010800 4.8e-09 65.9 236 28.8
Oeu052622.2 Olea europaea HOM05D022101 ORTHO05D022209 4.8e-09 65.9 234 29.9
Cc06_g06490 Coffea canephora HOM05D019826 ORTHO05D022411 1.4e-08 64.3 251 31.9
Duzib093G0513 Durio zibethinus HOM05D009231 ORTHO05D010800 1.8e-08 63.9 227 30.8
Nn6g34706 Nelumbo nucifera HOM05D009231 ORTHO05D010800 7.0e-08 62.0 228 30.7
TAR633G1440 Trochodendron aralioides HOM05D009231 ORTHO05D010800 1.5e-07 60.8 266 27.8
QL07p036848 Quercus lobata HOM05D009231 ORTHO05D010800 3.4e-07 59.7 252 30.6
Cpa.g.sc104.38 Carica papaya HOM05D009231 ORTHO05D010800 1.0e-06 58.2 225 33.3
Sc20g0006710 Simmondsia chinensis HOM05D009231 ORTHO05D010800 1.0e-06 58.2 234 29.5
Prupe.7G095600 Prunus persica HOM05D015804 ORTHO05D010800 1.3e-06 57.8 234 30.8
PSO339G1113 Papaver somniferum HOM05D027017 ORTHO05D010800 5.0e-06 55.8 232 28.9


User provided reference genes

Program Settings