Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0002956g0040 Nicotiana tabacum HOM05D011951 ORTHO05D000006 1.1e-107 393.3 194 100.0
Nitab4.5_0002414g0080 Nicotiana tabacum HOM05D011951 ORTHO05D000007 4.3e-43 178.7 171 59.6
Nitab4.5_0003810g0050 Nicotiana tabacum HOM05D011951 ORTHO05D000007 2.2e-39 166.4 145 65.5
Nitab4.5_0000274g0260 Nicotiana tabacum HOM05D011951 ORTHO05D284516 1.0e-28 131.0 110 63.6
Nitab4.5_0007986g0030 Nicotiana tabacum HOM05D000024 ORTHO05D000007 3.0e-28 129.4 210 38.6
Nitab4.5_0000396g0200 Nicotiana tabacum HOM05D011951 ORTHO05D000006 8.9e-25 117.9 182 42.3
Nitab4.5_0000274g0290 Nicotiana tabacum HOM05D000024 ORTHO05D000007 1.9e-22 110.2 92 66.3
Nitab4.5_0001287g0180 Nicotiana tabacum HOM05D000024 ORTHO05D000007 2.3e-20 103.2 180 36.7
Nitab4.5_0000358g0070 Nicotiana tabacum HOM05D011951 ORTHO05D284315 2.1e-18 96.7 72 72.2
Nitab4.5_0002053g0110 Nicotiana tabacum HOM05D000024 ORTHO05D000007 1.5e-16 90.5 191 34.6
Nitab4.5_0027927g0020 Nicotiana tabacum HOM05D008844 ORTHO05D000006 5.4e-14 82.0 148 32.4
Nitab4.5_0011177g0020 Nicotiana tabacum HOM05D008844 ORTHO05D000006 2.1e-13 80.1 186 30.6
Nitab4.5_0002924g0060 Nicotiana tabacum HOM05D000024 ORTHO05D000006 4.6e-13 79.0 214 25.7
Nitab4.5_0005065g0030 Nicotiana tabacum HOM05D008844 ORTHO05D000006 6.0e-13 78.6 205 31.7
Nitab4.5_0001360g0020 Nicotiana tabacum HOM05D023645 ORTHO05D000007 1.0e-12 77.8 173 34.7
Nitab4.5_0001580g0150 Nicotiana tabacum HOM05D011951 ORTHO05D284899 1.0e-12 77.8 56 67.9
Nitab4.5_0000355g0120 Nicotiana tabacum HOM05D000024 ORTHO05D000007 1.5e-11 73.9 174 29.9
Nitab4.5_0003236g0020 Nicotiana tabacum HOM05D000024 ORTHO05D000007 2.5e-11 73.2 186 32.3
Nitab4.5_0006768g0010 Nicotiana tabacum HOM05D000125 ORTHO05D013275 4.3e-11 72.4 56 53.6
Nitab4.5_0003284g0030 Nicotiana tabacum HOM05D011951 ORTHO05D282778 1.3e-10 70.9 47 74.5
Nitab4.5_0003601g0040 Nicotiana tabacum HOM05D008844 ORTHO05D000006 1.6e-10 70.5 161 34.8
Nitab4.5_0002249g0030 Nicotiana tabacum HOM05D000024 ORTHO05D000007 2.8e-10 69.7 187 28.9
Nitab4.5_0000008g0530 Nicotiana tabacum HOM05D000024 ORTHO05D000007 3.6e-10 69.3 55 47.3
Nitab4.5_0001676g0050 Nicotiana tabacum HOM05D000024 ORTHO05D000006 3.6e-10 69.3 129 31.0
Nitab4.5_0002328g0050 Nicotiana tabacum HOM05D008844 ORTHO05D000006 3.6e-10 69.3 60 46.7
Nitab4.5_0005413g0080 Nicotiana tabacum HOM05D008844 ORTHO05D000006 3.6e-10 69.3 98 38.8
Nitab4.5_0002170g0110 Nicotiana tabacum HOM05D008844 ORTHO05D000006 4.8e-10 68.9 57 50.9
Nitab4.5_0001980g0120 Nicotiana tabacum HOM05D000024 ORTHO05D000006 1.8e-09 67.0 60 41.7
Nitab4.5_0000386g0220 Nicotiana tabacum HOM05D000024 ORTHO05D000007 3.1e-09 66.2 58 48.3
Nitab4.5_0000527g0060 Nicotiana tabacum HOM05D008844 ORTHO05D000006 4.0e-09 65.9 55 50.9
Nitab4.5_0000370g0070 Nicotiana tabacum HOM05D012219 ORTHO05D000006 9.0e-09 64.7 165 32.7
Nitab4.5_0000058g0330 Nicotiana tabacum HOM05D008844 ORTHO05D000006 1.2e-08 64.3 84 39.3
Nitab4.5_0004728g0120 Nicotiana tabacum HOM05D008844 ORTHO05D000006 1.2e-08 64.3 92 39.1
Nitab4.5_0005859g0030 Nicotiana tabacum HOM05D008844 ORTHO05D000006 2.0e-08 63.5 51 56.9
Nitab4.5_0001158g0070 Nicotiana tabacum HOM05D008844 ORTHO05D000006 3.4e-08 62.8 93 36.6
Nitab4.5_0000431g0030 Nicotiana tabacum HOM05D036910 ORTHO05D286084 4.5e-08 62.4 102 38.2
Nitab4.5_0004763g0010 Nicotiana tabacum HOM05D008844 ORTHO05D000006 4.5e-08 62.4 57 45.6
Nitab4.5_0000832g0100 Nicotiana tabacum HOM05D026524 ORTHO05D000006 5.8e-08 62.0 48 58.3
Nitab4.5_0002004g0080 Nicotiana tabacum HOM05D000024 ORTHO05D000007 7.6e-08 61.6 52 51.9
Nitab4.5_0007582g0070 Nicotiana tabacum HOM05D000024 ORTHO05D000006 7.6e-08 61.6 86 36.0
Nitab4.5_0001027g0060 Nicotiana tabacum HOM05D008844 ORTHO05D000006 9.9e-08 61.2 123 29.3
Nitab4.5_0000350g0320 Nicotiana tabacum HOM05D008844 ORTHO05D000006 1.3e-07 60.8 46 50.0
Nitab4.5_0000539g0110 Nicotiana tabacum HOM05D000024 ORTHO05D000006 2.2e-07 60.1 54 46.3
Nitab4.5_0001790g0050 Nicotiana tabacum HOM05D000024 ORTHO05D000007 2.2e-07 60.1 52 48.1
Nitab4.5_0006168g0050 Nicotiana tabacum HOM05D000024 ORTHO05D000006 2.2e-07 60.1 43 51.2
Nitab4.5_0000372g0090 Nicotiana tabacum HOM05D014359 ORTHO05D000007 3.8e-07 59.3 155 30.3
Nitab4.5_0000540g0160 Nicotiana tabacum HOM05D008844 ORTHO05D000006 3.8e-07 59.3 173 34.7
Nitab4.5_0000697g0140 Nicotiana tabacum HOM05D000024 ORTHO05D000006 3.8e-07 59.3 54 44.4
Nitab4.5_0005334g0060 Nicotiana tabacum HOM05D012219 ORTHO05D000006 3.8e-07 59.3 194 27.3
Nitab4.5_0000026g0090 Nicotiana tabacum HOM05D000024 ORTHO05D000006 4.9e-07 58.9 55 41.8
Nitab4.5_0000261g0290 Nicotiana tabacum HOM05D000024 ORTHO05D000006 4.9e-07 58.9 54 40.7
Nitab4.5_0007582g0050 Nicotiana tabacum HOM05D000024 ORTHO05D000007 4.9e-07 58.9 56 44.6
SHI15838 Sapria himalayana HOM05D000024 ORTHO05D000006 4.9e-07 58.9 75 44.0
Nitab4.5_0000103g0260 Nicotiana tabacum HOM05D000024 ORTHO05D000006 6.4e-07 58.5 54 44.4
Nitab4.5_0003921g0020 Nicotiana tabacum HOM05D000024 ORTHO05D000006 6.4e-07 58.5 60 41.7
Nitab4.5_0000491g0040 Nicotiana tabacum HOM05D008844 ORTHO05D000006 1.1e-06 57.8 49 49.0
Nitab4.5_0002977g0060 Nicotiana tabacum HOM05D000024 ORTHO05D000006 1.1e-06 57.8 34 64.7
Nitab4.5_0003178g0100 Nicotiana tabacum HOM05D000024 ORTHO05D000006 1.4e-06 57.4 110 36.4
Nitab4.5_0028335g0010 Nicotiana tabacum HOM05D045504 ORTHO05D000006 1.9e-06 57.0 38 57.9
SHI54229 Sapria himalayana HOM05D000024 ORTHO05D000006 1.9e-06 57.0 91 31.9
Nitab4.5_0007450g0030 Nicotiana tabacum HOM05D008844 ORTHO05D000006 3.2e-06 56.2 93 30.1
Nitab4.5_0001783g0110 Nicotiana tabacum HOM05D000024 ORTHO05D000006 4.2e-06 55.8 54 46.3
Nitab4.5_0006324g0030 Nicotiana tabacum HOM05D000024 ORTHO05D000006 4.2e-06 55.8 56 41.1
Nitab4.5_0000575g0280 Nicotiana tabacum HOM05D000024 ORTHO05D000007 5.4e-06 55.5 120 29.2
SHI48696 Sapria himalayana HOM05D000024 ORTHO05D000006 5.4e-06 55.5 55 47.3
Nitab4.5_0002108g0100 Nicotiana tabacum HOM05D000024 ORTHO05D000006 7.1e-06 55.1 56 46.4
SHI21937 Sapria himalayana HOM05D000024 ORTHO05D000006 7.1e-06 55.1 63 38.1
SHI35886 Sapria himalayana HOM05D000024 ORTHO05D000006 7.1e-06 55.1 63 38.1
SHI46740 Sapria himalayana HOM05D000024 ORTHO05D000006 7.1e-06 55.1 63 38.1
SHI19795 Sapria himalayana HOM05D000024 ORTHO05D000006 9.3e-06 54.7 63 38.1
SHI24107 Sapria himalayana HOM05D000024 ORTHO05D000006 9.3e-06 54.7 63 38.1


User provided reference genes

Program Settings