Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0002954g0080 Nicotiana tabacum HOM05D002890 ORTHO05D005855 1.8e-58 229.2 127 100.0
Nitab4.5_0001678g0050 Nicotiana tabacum HOM05D002890 ORTHO05D005855 1.6e-46 189.5 124 87.1
Nitab4.5_0000033g0410 Nicotiana tabacum HOM05D002890 ORTHO05D005855 3.5e-46 188.3 124 86.3
Nitab4.5_0001247g0050 Nicotiana tabacum HOM05D002890 ORTHO05D005855 1.3e-45 186.4 124 87.1
Peaxi162Scf00643g00544 Petunia axillaris HOM05D002890 ORTHO05D005855 3.9e-37 158.3 124 70.2
Solyc06g072270.4 Solanum lycopersicum HOM05D002890 ORTHO05D005855 1.1e-36 156.8 124 76.6
Sopen06g028640 Solanum pennellii HOM05D002890 ORTHO05D005855 1.1e-36 156.8 124 76.6
CAN.G65.76 Capsicum annuum HOM05D002890 ORTHO05D005855 3.2e-31 138.7 124 66.1
Dinv20052 Davidia involucrata HOM05D002890 ORTHO05D005855 8.2e-27 124.0 124 55.6
CSS0042685 Camellia sinensis var. sinensis HOM05D002890 ORTHO05D005855 3.1e-26 122.1 124 52.4
Dinv13894 Davidia involucrata HOM05D002890 ORTHO05D005855 4.5e-25 118.2 121 52.1
Oeu039345.1 Olea europaea HOM05D002890 ORTHO05D005855 1.3e-24 116.7 125 52.0
SalBow5G1338 Salvia bowleyana HOM05D002890 ORTHO05D005855 4.9e-24 114.8 120 51.7
TAR629G0274 Trochodendron aralioides HOM05D002890 ORTHO05D005855 6.5e-24 114.4 120 60.8
GSVIVG01012724001 Vitis vinifera HOM05D002890 ORTHO05D005855 6.5e-24 114.4 128 50.8
TAR381G0565 Trochodendron aralioides HOM05D002890 ORTHO05D005855 5.5e-23 111.3 126 51.6
Cc09_g01670 Coffea canephora HOM05D002890 ORTHO05D005855 7.1e-23 110.9 123 51.2
Prupe.4G020900 Prunus persica HOM05D002890 ORTHO05D005855 7.1e-23 110.9 125 56.0
Cfa000220 Carpinus fangiana HOM05D002890 ORTHO05D005855 2.1e-22 109.4 127 49.6
Haze_06800 Corylus avellana HOM05D002890 ORTHO05D005855 4.6e-22 108.2 127 49.6
MSTRG.23208 Avicennia marina HOM05D002890 ORTHO05D005855 1.8e-21 106.3 120 45.8
Migut.O00260 Erythranthe guttata HOM05D002890 ORTHO05D005855 1.8e-21 106.3 120 49.2
Manes.17G038900 Manihot esculenta HOM05D002890 ORTHO05D005855 1.8e-21 106.3 125 48.8
Atru.chr10.2227 Acer truncatum HOM05D002890 ORTHO05D005855 3.0e-21 105.5 131 49.6
Eucgr.E04054 Eucalyptus grandis HOM05D002890 ORTHO05D005855 6.7e-21 104.4 128 50.0
Duzib192G0355 Durio zibethinus HOM05D002890 ORTHO05D005855 1.1e-20 103.6 127 46.5
Thecc.06G220400 Theobroma cacao HOM05D002890 ORTHO05D005855 1.1e-20 103.6 126 56.3
CANSAT64G2516 Cannabis sativa HOM05D002890 ORTHO05D005855 1.9e-20 102.8 124 44.4
Nn4g25681 Nelumbo nucifera HOM05D002890 ORTHO05D005855 1.9e-20 102.8 125 52.0
arahy.Tifrunner.gnm1.ann1.1MU60G Arachis hypogaea HOM05D002890 ORTHO05D005855 2.5e-20 102.4 125 48.8
arahy.Tifrunner.gnm1.ann1.3SKL4U Arachis hypogaea HOM05D002890 ORTHO05D005855 2.5e-20 102.4 125 48.8
Glyma.15G107800 Glycine max HOM05D002890 ORTHO05D005855 2.5e-20 102.4 124 48.4
MELO3C013937.2 Cucumis melo HOM05D002890 ORTHO05D005855 3.3e-20 102.1 128 44.5
MD10G1321400 Malus domestica HOM05D002890 ORTHO05D005855 3.3e-20 102.1 125 52.0
TPR.G9950 Trifolium pratense HOM05D002890 ORTHO05D005855 3.3e-20 102.1 125 45.6
Rhsim06G0075600 Rhododendron simsii HOM05D002890 ORTHO05D005855 4.3e-20 101.7 124 46.8
CANSAT56G4108 Cannabis sativa HOM05D002890 ORTHO05D005855 5.7e-20 101.3 124 44.4
ClCG10G002660 Citrullus lanatus HOM05D002890 ORTHO05D005855 5.7e-20 101.3 128 47.7
CiPaw.09G092000 Carya illinoinensis HOM05D002890 ORTHO05D005855 9.7e-20 100.5 127 48.8
AUR62034232 Chenopodium quinoa HOM05D002890 ORTHO05D005855 9.7e-20 100.5 127 44.9
CsaV3_3G002680 Cucumis sativus L. HOM05D002890 ORTHO05D005855 9.7e-20 100.5 128 46.1
Glyma.13G204900 Glycine max HOM05D002890 ORTHO05D005855 9.7e-20 100.5 124 47.6
Lalb_Chr20g0118631 Lupinus albus HOM05D002890 ORTHO05D005855 9.7e-20 100.5 125 48.0
Ciclev10010907m.g Citrus clementina HOM05D002890 ORTHO05D005855 1.3e-19 100.1 129 52.7
Lj1P1230T41 Lonicera japonica HOM05D002890 ORTHO05D005855 1.3e-19 100.1 127 47.2
Sabra11G0001700 Salix brachista HOM05D002890 ORTHO05D005855 1.6e-19 99.8 124 44.4
Gohir.A10G012660 Gossypium hirsutum HOM05D002890 ORTHO05D005855 2.2e-19 99.4 127 48.0
Gorai.011G014000 Gossypium raimondii HOM05D002890 ORTHO05D005855 2.2e-19 99.4 127 48.0
VMungo1309G2953 Vigna mungo HOM05D002890 ORTHO05D005855 2.2e-19 99.4 125 48.0
PSO017G2731 Papaver somniferum HOM05D002890 ORTHO05D005855 3.7e-19 98.6 123 45.5
Potri.011G003500 Populus trichocarpa HOM05D002890 ORTHO05D005855 4.8e-19 98.2 127 46.5
AUR62029351 Chenopodium quinoa HOM05D002890 ORTHO05D005855 8.2e-19 97.4 126 44.4
PSO478G2895 Papaver somniferum HOM05D002890 ORTHO05D005855 8.2e-19 97.4 123 45.5
Gohir.D10G012400 Gossypium hirsutum HOM05D002890 ORTHO05D005855 1.1e-18 97.1 127 47.2
Psat3g207880 Pisum sativum HOM05D002890 ORTHO05D005855 1.1e-18 97.1 124 44.4
Phvul.006G149850 Phaseolus vulgaris HOM05D002890 ORTHO05D005855 1.8e-18 96.3 125 48.0
Hund21410 Selenicereus undatus HOM05D002890 ORTHO05D005855 1.8e-18 96.3 125 44.8
VMungo0540G2163 Vigna mungo HOM05D002890 ORTHO05D005855 1.8e-18 96.3 125 47.2
COL.COLO4_31775 Corchorus olitorius HOM05D002890 ORTHO05D005855 2.4e-18 95.9 130 45.4
QL03p063516 Quercus lobata HOM05D002890 ORTHO05D005855 2.4e-18 95.9 125 49.6
QL03p063938 Quercus lobata HOM05D002890 ORTHO05D005855 2.4e-18 95.9 125 49.6
vmacro21934 Vaccinium macrocarpon HOM05D002890 ORTHO05D005855 4.1e-18 95.1 124 45.2
MD05G1346800 Malus domestica HOM05D002890 ORTHO05D005855 9.0e-18 94.0 124 45.2
ATR0580G054 Amborella trichopoda HOM05D002890 ORTHO05D005855 1.5e-17 93.2 120 42.5
Medtr2g023280 Medicago truncatula HOM05D002890 ORTHO05D005855 2.0e-17 92.8 124 44.4
CDE05G0302 Ceratophyllum demersum HOM05D002890 ORTHO05D005855 2.6e-17 92.4 129 41.9
Lj6g0006472 Lotus japonicus HOM05D002890 ORTHO05D005855 2.6e-17 92.4 124 45.2
QL05p073153 Quercus lobata HOM05D002890 ORTHO05D005855 2.6e-17 92.4 69 63.8
SEGI_27437 Sequoiadendron giganteum HOM05D002890 ORTHO05D005855 3.4e-17 92.0 122 39.3
Sc17g0007380 Simmondsia chinensis HOM05D002890 ORTHO05D005855 5.9e-17 91.3 125 41.6
PGR042G1125 Punica granatum HOM05D002890 ORTHO05D005855 1.0e-16 90.5 130 40.0
RcHm_v2.0_Chr5g0002971 Rosa chinensis HOM05D002890 ORTHO05D005855 1.3e-16 90.1 122 46.7
CiPaw.10G071100 Carya illinoinensis HOM05D002890 ORTHO05D005855 1.7e-16 89.7 61 67.2
Sed0017963 Sechium edule HOM05D002890 ORTHO05D005855 1.7e-16 89.7 128 40.6
Mapoly0029s0108 Marchantia polymorpha HOM05D002890 ORTHO05D005855 2.2e-16 89.4 123 39.8
unitig_749.g13717 Utricularia gibba HOM05D002890 ORTHO05D005855 2.2e-16 89.4 127 41.7
DCAR_028200 Daucus carota HOM05D002890 ORTHO05D005855 2.9e-16 89.0 127 40.9
Ca_00660_v3 Cicer arietinum L. HOM05D002890 ORTHO05D005855 5.0e-16 88.2 124 41.1
TWI38G1984 Tripterygium wilfordii HOM05D002890 ORTHO05D005855 5.0e-16 88.2 126 42.1
FvH4_3g02070 Fragaria vesca HOM05D002890 ORTHO05D005855 8.5e-16 87.4 122 45.9
FAN21G0074 Fragaria x ananassa HOM05D002890 ORTHO05D005855 8.5e-16 87.4 122 45.9
AagrBONN_evm.TU.Sc2ySwM_228.3189 Anthoceros agrestis HOM05D002890 ORTHO05D005855 1.1e-15 87.0 73 57.5
FAN25G2328 Fragaria x ananassa HOM05D002890 ORTHO05D005855 1.1e-15 87.0 122 45.9
Lj1g0005233 Lotus japonicus HOM05D002890 ORTHO05D005855 1.1e-15 87.0 124 43.5
Lsat_1_v5_gn_7_16040 Lactuca sativa HOM05D002890 ORTHO05D005855 1.4e-15 86.7 125 42.4
RcHm_v2.0_Chr5g0003091 Rosa chinensis HOM05D002890 ORTHO05D005855 1.4e-15 86.7 63 65.1
ECA236G1013 Erigeron canadensis HOM05D002890 ORTHO05D005855 3.2e-15 85.5 124 46.0
TWI38G1729 Tripterygium wilfordii HOM05D002890 ORTHO05D005855 7.2e-15 84.3 125 42.4
Ah.06g183850 Amaranthus hybridus HOM05D002890 ORTHO05D005855 2.1e-14 82.8 128 41.4
Aqoxy1G00468 Aquilegia oxysepala HOM05D002890 ORTHO05D005855 2.7e-14 82.4 117 43.6
HPP92_025078 Vanilla planifolia HOM05D002890 ORTHO05D005855 2.7e-14 82.4 122 36.9
EL10Ac4g08116 Beta vulgaris HOM05D002890 ORTHO05D005855 1.0e-13 80.5 57 59.6
HanXRQChr15g0470641 Helianthus annuus HOM05D002890 ORTHO05D005855 1.0e-13 80.5 52 63.5
SHI02202 Sapria himalayana HOM05D000002 ORTHO05D000001 1.0e-13 80.5 61 63.9
Pp3c26_140 Physcomitrium patens HOM05D002890 ORTHO05D005855 5.7e-12 74.7 120 36.7
MBI15_g03194_MAGBIO Magnolia biondii HOM05D002890 ORTHO05D005855 9.7e-12 73.9 56 60.7
Aa31LG2G1570 Aethionema arabicum HOM05D002890 ORTHO05D005855 8.2e-11 70.9 66 43.9
CARHR046380 Cardamine hirsuta HOM05D002890 ORTHO05D005855 1.1e-10 70.5 77 41.6
Thhalv10023221m.g Eutrema salsugineum HOM05D002890 ORTHO05D005855 1.8e-10 69.7 69 43.5
BcaC04g22581 Brassica carinata HOM05D002890 ORTHO05D007906 3.1e-10 68.9 64 48.4
AL2G10210 Arabidopsis lyrata HOM05D002890 ORTHO05D005855 4.1e-10 68.6 69 43.5
Carub.0002s0019 Capsella rubella HOM05D002890 ORTHO05D005855 6.9e-10 67.8 69 42.0
THA.LOC104812970 Tarenaya hassleriana HOM05D002890 ORTHO05D005855 6.9e-10 67.8 61 52.5
SMO364G0505 Selaginella moellendorffii HOM05D002890 ORTHO05D005855 3.4e-09 65.5 122 32.8
Nitab4.5_0022153g0010 Nicotiana tabacum HOM05D002890 ORTHO05D005855 4.5e-09 65.1 32 96.9
Zm00001eb310710 Zea mays HOM05D002890 ORTHO05D005855 4.5e-09 65.1 70 45.7
C09p17660 Brassica napus HOM05D002890 ORTHO05D005855 5.9e-09 64.7 77 42.9
BolC9t54660H Brassica oleracea HOM05D002890 ORTHO05D005855 5.9e-09 64.7 77 42.9
AT1G64570 Arabidopsis thaliana HOM05D002890 ORTHO05D005855 7.7e-09 64.3 69 42.0
A09p14580 Brassica napus HOM05D002890 ORTHO05D005855 1.0e-08 63.9 55 50.9
BraA09t37106Z Brassica rapa HOM05D002890 ORTHO05D005855 1.0e-08 63.9 55 50.9
Sp2g00190 Schrenkiella parvula HOM05D002890 ORTHO05D005855 5.0e-08 61.6 71 43.7
Actinidia36598 Actinidia chinensis HOM05D002890 ORTHO05D005855 7.2e-07 57.8 124 34.7


User provided reference genes

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