Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0002954g0060 Nicotiana tabacum HOM05D002890 ORTHO05D005855 1.9e-73 279.3 161 100.0
Nitab4.5_0000033g0410 Nicotiana tabacum HOM05D002890 ORTHO05D005855 6.2e-48 194.5 178 75.8
Nitab4.5_0001678g0050 Nicotiana tabacum HOM05D002890 ORTHO05D005855 9.0e-47 190.7 178 73.6
Peaxi162Scf00643g00544 Petunia axillaris HOM05D002890 ORTHO05D005855 9.0e-39 164.1 179 64.8
Sopen06g028640 Solanum pennellii HOM05D002890 ORTHO05D005855 2.6e-38 162.5 177 63.3
Solyc06g072270.4 Solanum lycopersicum HOM05D002890 ORTHO05D005855 7.6e-38 161.0 177 62.7
CAN.G65.76 Capsicum annuum HOM05D002890 ORTHO05D005855 3.2e-36 155.6 177 62.7
Nitab4.5_0022153g0010 Nicotiana tabacum HOM05D002890 ORTHO05D005855 6.3e-32 141.4 106 88.7
Dinv20052 Davidia involucrata HOM05D002890 ORTHO05D005855 1.4e-23 113.6 157 54.8
vmacro21934 Vaccinium macrocarpon HOM05D002890 ORTHO05D005855 2.0e-22 109.8 120 55.0
Dinv13894 Davidia involucrata HOM05D002890 ORTHO05D005855 7.7e-22 107.8 135 58.5
CSS0042685 Camellia sinensis var. sinensis HOM05D002890 ORTHO05D005855 1.0e-21 107.5 108 57.4
Ciclev10010907m.g Citrus clementina HOM05D002890 ORTHO05D005855 2.2e-21 106.3 155 55.5
arahy.Tifrunner.gnm1.ann1.3SKL4U Arachis hypogaea HOM05D002890 ORTHO05D005855 5.0e-21 105.1 115 67.8
Rhsim06G0075600 Rhododendron simsii HOM05D002890 ORTHO05D005855 8.5e-21 104.4 123 52.8
THA.LOC104812970 Tarenaya hassleriana HOM05D002890 ORTHO05D005855 1.1e-20 104.0 116 62.1
Hund21410 Selenicereus undatus HOM05D002890 ORTHO05D005855 2.5e-20 102.8 133 51.1
Lalb_Chr20g0118631 Lupinus albus HOM05D002890 ORTHO05D005855 5.5e-20 101.7 132 56.8
Ca_00660_v3 Cicer arietinum L. HOM05D002890 ORTHO05D005855 7.2e-20 101.3 113 69.0
arahy.Tifrunner.gnm1.ann1.1MU60G Arachis hypogaea HOM05D002890 ORTHO05D005855 1.6e-19 100.1 115 66.1
Lj1P1230T41 Lonicera japonica HOM05D002890 ORTHO05D005855 1.6e-19 100.1 109 62.4
Prupe.4G020900 Prunus persica HOM05D002890 ORTHO05D005855 2.7e-19 99.4 107 70.1
DCAR_028200 Daucus carota HOM05D002890 ORTHO05D005855 3.6e-19 99.0 106 70.8
COL.COLO4_31775 Corchorus olitorius HOM05D002890 ORTHO05D005855 6.1e-19 98.2 118 64.4
MSTRG.23208 Avicennia marina HOM05D002890 ORTHO05D005855 1.0e-18 97.4 157 54.8
Gohir.D10G012400 Gossypium hirsutum HOM05D002890 ORTHO05D005855 1.4e-18 97.1 95 74.7
Gorai.011G014000 Gossypium raimondii HOM05D002890 ORTHO05D005855 1.4e-18 97.1 95 74.7
Eucgr.E04054 Eucalyptus grandis HOM05D002890 ORTHO05D005855 1.8e-18 96.7 122 58.2
RcHm_v2.0_Chr5g0002971 Rosa chinensis HOM05D002890 ORTHO05D005855 1.8e-18 96.7 111 57.7
Lsat_1_v5_gn_7_16040 Lactuca sativa HOM05D002890 ORTHO05D005855 3.0e-18 95.9 120 60.8
Thecc.06G220400 Theobroma cacao HOM05D002890 ORTHO05D005855 3.0e-18 95.9 106 64.2
PSO017G2731 Papaver somniferum HOM05D002890 ORTHO05D005855 5.1e-18 95.1 100 54.0
TAR381G0565 Trochodendron aralioides HOM05D002890 ORTHO05D005855 5.1e-18 95.1 107 63.6
Migut.O00260 Erythranthe guttata HOM05D002890 ORTHO05D005855 6.7e-18 94.7 105 68.6
Gohir.A10G012660 Gossypium hirsutum HOM05D002890 ORTHO05D005855 8.8e-18 94.4 95 73.7
FvH4_3g02070 Fragaria vesca HOM05D002890 ORTHO05D005855 1.5e-17 93.6 109 54.1
FAN21G0074 Fragaria x ananassa HOM05D002890 ORTHO05D005855 1.5e-17 93.6 109 53.2
FAN25G2328 Fragaria x ananassa HOM05D002890 ORTHO05D005855 1.5e-17 93.6 109 54.1
Aqoxy1G00468 Aquilegia oxysepala HOM05D002890 ORTHO05D005855 2.0e-17 93.2 107 58.9
CANSAT56G4108 Cannabis sativa HOM05D002890 ORTHO05D005855 2.6e-17 92.8 123 58.5
CANSAT64G2516 Cannabis sativa HOM05D002890 ORTHO05D005855 2.6e-17 92.8 123 58.5
TAR629G0274 Trochodendron aralioides HOM05D002890 ORTHO05D005855 2.6e-17 92.8 106 67.0
Cfa000220 Carpinus fangiana HOM05D002890 ORTHO05D005855 3.3e-17 92.4 115 62.6
Nitab4.5_0001247g0050 Nicotiana tabacum HOM05D002890 ORTHO05D005855 3.3e-17 92.4 109 68.8
MD10G1321400 Malus domestica HOM05D002890 ORTHO05D005855 4.4e-17 92.0 101 70.3
Oeu039345.1 Olea europaea HOM05D002890 ORTHO05D005855 4.4e-17 92.0 105 53.3
CiPaw.10G071000 Carya illinoinensis HOM05D002890 ORTHO05D005855 5.7e-17 91.7 99 70.7
TWI38G1729 Tripterygium wilfordii HOM05D002890 ORTHO05D005855 5.7e-17 91.7 108 64.8
Medtr2g023280 Medicago truncatula HOM05D002890 ORTHO05D005855 7.4e-17 91.3 124 60.5
Haze_06800 Corylus avellana HOM05D002890 ORTHO05D005855 9.7e-17 90.9 107 65.4
Nn4g25681 Nelumbo nucifera HOM05D002890 ORTHO05D005855 1.3e-16 90.5 116 63.8
Psat3g207880 Pisum sativum HOM05D002890 ORTHO05D005855 1.3e-16 90.5 113 61.1
Sc17g0007380 Simmondsia chinensis HOM05D002890 ORTHO05D005855 1.3e-16 90.5 107 59.8
ECA236G1013 Erigeron canadensis HOM05D002890 ORTHO05D005855 1.7e-16 90.1 150 52.0
MD05G1346800 Malus domestica HOM05D002890 ORTHO05D005855 2.8e-16 89.4 99 70.7
SalBow5G1338 Salvia bowleyana HOM05D002890 ORTHO05D005855 2.8e-16 89.4 104 65.4
ClCG10G002660 Citrullus lanatus HOM05D002890 ORTHO05D005855 3.7e-16 89.0 110 64.5
Atru.chr10.2227 Acer truncatum HOM05D002890 ORTHO05D005855 4.8e-16 88.6 107 66.4
AUR62034232 Chenopodium quinoa HOM05D002890 ORTHO05D005855 4.8e-16 88.6 76 59.2
Duzib192G0355 Durio zibethinus HOM05D002890 ORTHO05D005855 6.3e-16 88.2 144 54.2
TWI38G1984 Tripterygium wilfordii HOM05D002890 ORTHO05D005855 6.3e-16 88.2 99 70.7
CiPaw.09G092000 Carya illinoinensis HOM05D002890 ORTHO05D005855 8.2e-16 87.8 112 62.5
TPR.G9950 Trifolium pratense HOM05D002890 ORTHO05D005855 8.2e-16 87.8 111 64.9
AL2G10210 Arabidopsis lyrata HOM05D002890 ORTHO05D005855 1.1e-15 87.4 82 53.7
Sabra11G0001700 Salix brachista HOM05D002890 ORTHO05D005855 1.1e-15 87.4 121 60.3
QL03p063516 Quercus lobata HOM05D002890 ORTHO05D005855 1.4e-15 87.0 115 60.9
QL03p063938 Quercus lobata HOM05D002890 ORTHO05D005855 1.4e-15 87.0 115 60.9
EL10Ac4g08116 Beta vulgaris HOM05D002890 ORTHO05D005855 2.4e-15 86.3 99 61.6
Thhalv10023221m.g Eutrema salsugineum HOM05D002890 ORTHO05D005855 4.1e-15 85.5 109 60.6
Duzib160G0022 Durio zibethinus HOM05D002890 ORTHO05D005855 5.3e-15 85.1 93 66.7
AUR62029351 Chenopodium quinoa HOM05D002890 ORTHO05D005855 6.9e-15 84.7 65 61.5
AT1G64570 Arabidopsis thaliana HOM05D002890 ORTHO05D005855 9.1e-15 84.3 115 59.1
Cc09_g01670 Coffea canephora HOM05D002890 ORTHO05D005855 9.1e-15 84.3 113 49.6
CsaV3_3G002680 Cucumis sativus L. HOM05D002890 ORTHO05D005855 1.2e-14 84.0 122 58.2
Potri.011G003500 Populus trichocarpa HOM05D002890 ORTHO05D005855 1.2e-14 84.0 94 70.2
MELO3C013937.2 Cucumis melo HOM05D002890 ORTHO05D005855 1.5e-14 83.6 110 61.8
Sp2g00190 Schrenkiella parvula HOM05D002890 ORTHO05D005855 2.6e-14 82.8 127 52.8
A09p14580 Brassica napus HOM05D002890 ORTHO05D005855 3.4e-14 82.4 97 61.9
BraA09t37106Z Brassica rapa HOM05D002890 ORTHO05D005855 3.4e-14 82.4 97 61.9
CARHR046380 Cardamine hirsuta HOM05D002890 ORTHO05D005855 4.5e-14 82.0 116 55.2
Manes.17G038900 Manihot esculenta HOM05D002890 ORTHO05D005855 7.7e-14 81.3 62 71.0
Sed0017963 Sechium edule HOM05D002890 ORTHO05D005855 1.0e-13 80.9 119 58.0
C09p17660 Brassica napus HOM05D002890 ORTHO05D005855 1.7e-13 80.1 97 60.8
BolC9t54660H Brassica oleracea HOM05D002890 ORTHO05D005855 1.7e-13 80.1 97 60.8
Glyma.15G107800 Glycine max HOM05D002890 ORTHO05D005855 2.9e-13 79.3 113 61.1
Ah.06g183850 Amaranthus hybridus HOM05D002890 ORTHO05D005855 5.0e-13 78.6 103 49.5
HanXRQChr15g0470641 Helianthus annuus HOM05D002890 ORTHO05D005855 6.5e-13 78.2 100 62.0
Carub.0002s0019 Capsella rubella HOM05D002890 ORTHO05D005855 8.5e-13 77.8 96 65.6
Glyma.13G204900 Glycine max HOM05D002890 ORTHO05D005855 8.5e-13 77.8 109 58.7
Zm00001eb310710 Zea mays HOM05D002890 ORTHO05D005855 1.1e-12 77.4 101 58.4
ATR0580G054 Amborella trichopoda HOM05D002890 ORTHO05D005855 1.9e-12 76.6 133 53.4
VMungo1309G2953 Vigna mungo HOM05D002890 ORTHO05D005855 1.9e-12 76.6 114 56.1
MBI15_g03194_MAGBIO Magnolia biondii HOM05D002890 ORTHO05D005855 2.5e-12 76.3 65 64.6
Lj6g0006472 Lotus japonicus HOM05D002890 ORTHO05D005855 4.2e-12 75.5 113 58.4
PGR042G1125 Punica granatum HOM05D002890 ORTHO05D005855 7.2e-12 74.7 144 45.1
VMungo0540G2163 Vigna mungo HOM05D002890 ORTHO05D005855 7.2e-12 74.7 118 45.8
SEGI_27437 Sequoiadendron giganteum HOM05D002890 ORTHO05D005855 1.2e-11 73.9 107 60.7
Lj1g0005233 Lotus japonicus HOM05D002890 ORTHO05D005855 2.1e-11 73.2 109 58.7
HPP92_025078 Vanilla planifolia HOM05D002890 ORTHO05D005855 2.7e-11 72.8 121 52.1
Aa31LG2G1570 Aethionema arabicum HOM05D002890 ORTHO05D005855 3.6e-11 72.4 113 54.0
HPP92_025073 Vanilla planifolia HOM05D002890 ORTHO05D005855 6.1e-11 71.6 118 51.7
Pp3c26_140 Physcomitrium patens HOM05D002890 ORTHO05D005855 1.0e-10 70.9 123 49.6
SHI02202 Sapria himalayana HOM05D000002 ORTHO05D000001 1.4e-10 70.5 94 54.3
unitig_749.g13717 Utricularia gibba HOM05D002890 ORTHO05D005855 1.8e-10 70.1 105 60.0
Actinidia36598 Actinidia chinensis HOM05D002890 ORTHO05D005855 5.2e-10 68.6 115 40.9
Phvul.006G149850 Phaseolus vulgaris HOM05D002890 ORTHO05D005855 6.7e-10 68.2 112 53.6
GSVIVG01012724001 Vitis vinifera HOM05D002890 ORTHO05D005855 9.7e-09 64.3 112 39.3
BolC3t14541H Brassica oleracea HOM05D002890 ORTHO05D005855 1.7e-08 63.5 100 43.0
SMO364G0505 Selaginella moellendorffii HOM05D002890 ORTHO05D005855 1.4e-07 60.5 95 52.6
SEGI_38924 Sequoiadendron giganteum HOM05D009358 ORTHO05D011087 1.4e-07 60.5 65 50.8
BcaC01g05870 Brassica carinata HOM05D002890 ORTHO05D005855 2.4e-07 59.7 100 42.0
C03p21570 Brassica napus HOM05D002890 ORTHO05D005855 2.4e-07 59.7 100 42.0
AagrBONN_evm.TU.Sc2ySwM_228.3189 Anthoceros agrestis HOM05D002890 ORTHO05D005855 3.1e-07 59.3 58 58.6


User provided reference genes

Program Settings