Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0002949g0070 Nicotiana tabacum HOM05D007783 ORTHO05D009740 3.4e-51 205.3 155 100.0
Nitab4.5_0017430g0010 Nicotiana tabacum HOM05D007783 ORTHO05D009740 1.1e-33 147.1 77 96.1
Solyc07g052680.1 Solanum lycopersicum HOM05D007783 ORTHO05D009740 2.0e-27 126.3 158 72.2
Sopen07g026300 Solanum pennellii HOM05D007783 ORTHO05D009740 3.2e-25 119.0 158 70.3
PGSC0003DMG400026167 Solanum tuberosum HOM05D007783 ORTHO05D009740 3.0e-23 112.5 77 81.8
Peaxi162Scf00007g01310 Petunia axillaris HOM05D007783 ORTHO05D009740 1.0e-18 97.4 159 54.1
Thecc.02G163100 Theobroma cacao HOM05D007783 ORTHO05D009740 3.3e-14 82.4 62 66.1
Cc00_g19250 Coffea canephora HOM05D007783 ORTHO05D009740 7.4e-14 81.3 62 69.4
Dinv10909 Davidia involucrata HOM05D007783 ORTHO05D009740 7.4e-14 81.3 57 70.2
Gohir.A04G107200 Gossypium hirsutum HOM05D007783 ORTHO05D009740 9.7e-14 80.9 90 55.6
Ciclev10017097m.g Citrus clementina HOM05D007783 ORTHO05D009740 6.3e-13 78.2 103 50.5
CiPaw.03G163700 Carya illinoinensis HOM05D007783 ORTHO05D009740 8.2e-13 77.8 57 68.4
ClCG02G001700 Citrullus lanatus HOM05D000001 ORTHO05D000003 8.2e-13 77.8 86 52.3
Cpa.g.sc8.247 Carica papaya HOM05D007783 ORTHO05D009740 1.1e-12 77.4 46 78.3
Actinidia30505 Actinidia chinensis HOM05D007783 ORTHO05D009740 1.4e-12 77.0 57 64.9
Gohir.D04G147200 Gossypium hirsutum HOM05D007783 ORTHO05D009740 1.4e-12 77.0 90 53.3
Gorai.012G133100 Gossypium raimondii HOM05D007783 ORTHO05D009740 1.4e-12 77.0 90 55.6
Rhsim06G0156700 Rhododendron simsii HOM05D000213 ORTHO05D009740 1.4e-12 77.0 68 60.3
Sed0000870 Sechium edule HOM05D007783 ORTHO05D009740 1.4e-12 77.0 76 59.2
Cfa014450 Carpinus fangiana HOM05D007783 ORTHO05D009740 1.8e-12 76.6 64 59.4
CiPaw.04G118600 Carya illinoinensis HOM05D007783 ORTHO05D009740 1.8e-12 76.6 45 77.8
Cfa021131 Carpinus fangiana HOM05D007783 ORTHO05D009740 3.1e-12 75.9 77 54.5
MELO3C018795.2 Cucumis melo HOM05D007783 ORTHO05D009740 3.1e-12 75.9 78 56.4
FvH4_6g43650 Fragaria vesca HOM05D007783 ORTHO05D009740 3.1e-12 75.9 77 54.5
QL08p033993 Quercus lobata HOM05D007783 ORTHO05D009740 3.1e-12 75.9 64 64.1
Oeu041963.1 Olea europaea HOM05D007783 ORTHO05D009740 4.1e-12 75.5 77 59.7
COL.COLO4_13003 Corchorus olitorius HOM05D007783 ORTHO05D009740 6.9e-12 74.7 63 58.7
HanXRQChr17g0563901 Helianthus annuus HOM05D007783 ORTHO05D009740 6.9e-12 74.7 86 51.2
CSS0046432 Camellia sinensis var. sinensis HOM05D007783 ORTHO05D009740 1.2e-11 73.9 56 69.6
Potri.007G120101 Populus trichocarpa HOM05D007783 ORTHO05D009740 1.2e-11 73.9 87 54.0
Sed0005014 Sechium edule HOM05D007783 ORTHO05D009740 1.2e-11 73.9 76 56.6
Cfa021551 Carpinus fangiana HOM05D007783 ORTHO05D009740 1.5e-11 73.6 100 47.0
FAN14G2245 Fragaria x ananassa HOM05D007783 ORTHO05D009740 1.5e-11 73.6 77 53.2
Lsat_1_v5_gn_8_129821 Lactuca sativa HOM05D007783 ORTHO05D009740 1.5e-11 73.6 78 51.3
CSS0007715 Camellia sinensis var. sinensis HOM05D007783 ORTHO05D009740 2.0e-11 73.2 56 69.6
FAN05G3706 Fragaria x ananassa HOM05D007783 ORTHO05D009740 2.0e-11 73.2 72 58.3
Oeu011075.1 Olea europaea HOM05D007783 ORTHO05D009740 2.0e-11 73.2 84 50.0
Cfa014449 Carpinus fangiana HOM05D007783 ORTHO05D009740 2.6e-11 72.8 89 52.8
Gohir.A12G135100 Gossypium hirsutum HOM05D007783 ORTHO05D009740 2.6e-11 72.8 63 60.3
Manes.07G029300 Manihot esculenta HOM05D007783 ORTHO05D009740 2.6e-11 72.8 86 53.5
Gohir.D12G138800 Gossypium hirsutum HOM05D007783 ORTHO05D009740 3.4e-11 72.4 63 60.3
Gorai.008G150200 Gossypium raimondii HOM05D007783 ORTHO05D009740 3.4e-11 72.4 63 60.3
Prupe.3G221700 Prunus persica HOM05D007783 ORTHO05D009740 3.4e-11 72.4 74 52.7
Sabra17G0027500 Salix brachista HOM05D007783 ORTHO05D009740 3.4e-11 72.4 70 52.9
DCAR_012961 Daucus carota HOM05D007783 ORTHO05D009740 4.5e-11 72.0 88 54.5
Manes.10G111600 Manihot esculenta HOM05D007783 ORTHO05D009740 4.5e-11 72.0 86 51.2
MSTRG.12290 Avicennia marina HOM05D007783 ORTHO05D009740 7.7e-11 71.2 89 51.7
RcHm_v2.0_Chr2g0160271 Rosa chinensis HOM05D007783 ORTHO05D009740 7.7e-11 71.2 76 55.3
FAN09G3630 Fragaria x ananassa HOM05D007783 ORTHO05D009740 1.0e-10 70.9 64 62.5
TWI36G1428 Tripterygium wilfordii HOM05D007783 ORTHO05D009740 1.0e-10 70.9 68 57.4
Glyma.13G305400 Glycine max HOM05D007783 ORTHO05D009740 1.7e-10 70.1 88 52.3
Migut.H01214 Erythranthe guttata HOM05D007783 ORTHO05D009740 2.2e-10 69.7 68 55.9
Nn1g06962 Nelumbo nucifera HOM05D007783 ORTHO05D009740 3.8e-10 68.9 53 58.5
CANSAT64G1524 Cannabis sativa HOM05D007783 ORTHO05D009740 6.5e-10 68.2 74 58.1
Medtr2g089010 Medicago truncatula HOM05D007783 ORTHO05D009740 8.5e-10 67.8 74 56.8
Sabra07G0097600 Salix brachista HOM05D007783 ORTHO05D009740 1.1e-09 67.4 87 51.7
Lsat_1_v5_gn_3_43341 Lactuca sativa HOM05D007783 ORTHO05D009740 4.2e-09 65.5 65 52.3
Aqoxy4G02125 Aquilegia oxysepala HOM05D007783 ORTHO05D009740 5.5e-09 65.1 66 56.1
TWI18G0657 Tripterygium wilfordii HOM05D007783 ORTHO05D009740 7.2e-09 64.7 100 44.0
EL10Ac3g05472 Beta vulgaris HOM05D007783 ORTHO05D009740 9.4e-09 64.3 66 56.1
Lj3g0010205 Lotus japonicus HOM05D007783 ORTHO05D009740 9.4e-09 64.3 76 53.9
Psat5g265520 Pisum sativum HOM05D007783 ORTHO05D009740 9.4e-09 64.3 54 59.3
VMungo1080G1091 Vigna mungo HOM05D007783 ORTHO05D009740 1.2e-08 63.9 69 55.1
Sc21g0001790 Simmondsia chinensis HOM05D007783 ORTHO05D009740 3.6e-08 62.4 58 55.2
ECA246G5319 Erigeron canadensis HOM05D007783 ORTHO05D009740 4.6e-08 62.0 70 45.7
Phvul.005G112200 Phaseolus vulgaris HOM05D007783 ORTHO05D009740 7.9e-08 61.2 65 55.4
Sp3g19900 Schrenkiella parvula HOM05D007783 ORTHO05D009740 7.9e-08 61.2 48 60.4
Carub.0003s2223 Capsella rubella HOM05D007783 ORTHO05D009740 1.4e-07 60.5 97 41.2
AL3G36260 Arabidopsis lyrata HOM05D007783 ORTHO05D009740 2.3e-07 59.7 61 50.8
THA.LOC104802538 Tarenaya hassleriana HOM05D007783 ORTHO05D009740 3.0e-07 59.3 66 50.0
CARHR097930 Cardamine hirsuta HOM05D007783 ORTHO05D009740 3.9e-07 58.9 61 50.8
Ca_01568_v3 Cicer arietinum L. HOM05D007783 ORTHO05D009740 3.9e-07 58.9 66 54.5
VMungo0331G0946 Vigna mungo HOM05D007783 ORTHO05D009740 3.9e-07 58.9 87 47.1
C01p42180 Brassica napus HOM05D007783 ORTHO05D009740 1.5e-06 57.0 45 60.0
BolC1t04180H Brassica oleracea HOM05D007783 ORTHO05D009740 1.5e-06 57.0 45 60.0
PSO210G2314 Papaver somniferum HOM05D007783 ORTHO05D009740 1.5e-06 57.0 81 44.4
AT3G22070 Arabidopsis thaliana HOM05D007783 ORTHO05D009740 2.0e-06 56.6 48 56.2
CDE05G0218 Ceratophyllum demersum HOM05D007783 ORTHO05D009740 2.5e-06 56.2 80 46.2
Lalb_Chr19g0135631 Lupinus albus HOM05D007783 ORTHO05D009740 9.7e-06 54.3 65 50.8


User provided reference genes

Program Settings