Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0002944g0140 Nicotiana tabacum HOM05D013409 ORTHO05D013278 1.6e-152 542.7 283 100.0
Nitab4.5_0007367g0060 Nicotiana tabacum HOM05D013409 ORTHO05D013278 2.0e-113 412.9 267 83.5
PGSC0003DMG400005789 Solanum tuberosum HOM05D013409 ORTHO05D013278 1.6e-67 260.4 302 50.7
Sopen08g004150 Solanum pennellii HOM05D013409 ORTHO05D013278 3.1e-66 256.1 299 50.2
Solyc08g008290.3 Solanum lycopersicum HOM05D013409 ORTHO05D013278 8.3e-64 248.1 295 50.5
Peaxi162Scf00102g01722 Petunia axillaris HOM05D013409 ORTHO05D013278 1.2e-46 191.0 234 52.1
Nitab4.5_0010144g0050 Nicotiana tabacum HOM05D013409 ORTHO05D013278 1.3e-27 127.9 264 39.8
Nitab4.5_0000223g0290 Nicotiana tabacum HOM05D013409 ORTHO05D013278 4.2e-23 112.8 233 39.1
PGSC0003DMG400039275 Solanum tuberosum HOM05D013409 ORTHO05D013278 3.5e-22 109.8 253 37.9
Sopen08g030450 Solanum pennellii HOM05D013409 ORTHO05D013278 6.7e-21 105.5 258 33.7
CAN.G532.109 Capsicum annuum HOM05D013409 ORTHO05D013278 1.1e-20 104.8 213 35.7
SalBow1G6371 Salvia bowleyana HOM05D020898 ORTHO05D013278 6.1e-14 82.4 156 40.4
SalBow1G7699 Salvia bowleyana HOM05D020898 ORTHO05D013278 6.1e-14 82.4 156 40.4
Actinidia22147 Actinidia chinensis HOM05D010372 ORTHO05D010753 1.8e-13 80.9 171 37.4
Cc08_g15940 Coffea canephora HOM05D013409 ORTHO05D013278 3.9e-13 79.7 163 34.4
Oeu061103.1 Olea europaea HOM05D020898 ORTHO05D013278 5.1e-13 79.3 163 35.6
Dinv38842 Davidia involucrata HOM05D010372 ORTHO05D010753 8.8e-13 78.6 187 34.8
Gorai.004G134100 Gossypium raimondii HOM05D012734 ORTHO05D010753 3.1e-10 70.1 152 38.2
Gohir.D08G131200 Gossypium hirsutum HOM05D012734 ORTHO05D010753 1.5e-09 67.8 152 38.2
Manes.02G011000 Manihot esculenta HOM05D010372 ORTHO05D010753 3.4e-09 66.6 171 35.1
TAR636G2812 Trochodendron aralioides HOM05D017143 ORTHO05D010753 4.5e-09 66.2 178 33.1
Gohir.A08G097300 Gossypium hirsutum HOM05D012734 ORTHO05D010753 1.3e-08 64.7 152 36.2
Sabra03G0100100 Salix brachista HOM05D010372 ORTHO05D010753 3.8e-08 63.2 169 34.9
Potri.003G139000 Populus trichocarpa HOM05D010372 ORTHO05D010753 6.5e-08 62.4 169 32.5
Migut.A00666 Erythranthe guttata HOM05D020898 ORTHO05D013278 8.5e-08 62.0 87 44.8
COL.COLO4_10683 Corchorus olitorius HOM05D012734 ORTHO05D010753 1.1e-07 61.6 169 39.1
Manes.01G049631 Manihot esculenta HOM05D010372 ORTHO05D010753 1.1e-07 61.6 211 30.3
Sabra01G0068800 Salix brachista HOM05D010372 ORTHO05D010753 1.1e-07 61.6 170 31.8
Actinidia22146 Actinidia chinensis HOM05D000212 ORTHO05D000225 1.4e-07 61.2 157 36.3
Haze_08625 Corylus avellana HOM05D029168 ORTHO05D010753 1.4e-07 61.2 142 34.5
BcaB02g07874 Brassica carinata HOM05D011836 ORTHO05D013977 2.5e-07 60.5 132 38.6
Cfa023587 Carpinus fangiana HOM05D029168 ORTHO05D010753 2.5e-07 60.5 172 34.3
Cfa012797 Carpinus fangiana HOM05D029168 ORTHO05D010753 3.2e-07 60.1 172 34.9
BraA07t29783Z Brassica rapa HOM05D011836 ORTHO05D013977 4.2e-07 59.7 130 38.5
FAN04G2204 Fragaria x ananassa HOM05D010372 ORTHO05D010753 5.5e-07 59.3 196 31.6
TAR629G2703 Trochodendron aralioides HOM05D017143 ORTHO05D010753 7.2e-07 58.9 186 32.8
C06p20280 Brassica napus HOM05D011836 ORTHO05D013977 1.2e-06 58.2 130 38.5
BolC6t37208H Brassica oleracea HOM05D011836 ORTHO05D013977 1.2e-06 58.2 130 38.5
Duzib068G0715 Durio zibethinus HOM05D012734 ORTHO05D010753 1.2e-06 58.2 146 35.6
CiPaw.11G122600 Carya illinoinensis HOM05D010372 ORTHO05D010753 4.7e-06 56.2 196 33.2
SGA_v2.0_scaffold96G28972 Striga asiatica HOM05D020898 ORTHO05D013278 4.7e-06 56.2 155 28.4
Thecc.03G296200 Theobroma cacao HOM05D012734 ORTHO05D010753 4.7e-06 56.2 144 36.8


User provided reference genes

Program Settings