Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0002937g0030 Nicotiana tabacum HOM05D006155 ORTHO05D007529 2.3e-142 508.8 253 100.0
Nitab4.5_0003474g0030 Nicotiana tabacum HOM05D006155 ORTHO05D007529 2.1e-135 485.7 253 94.9
Solyc09g090750.3 Solanum lycopersicum HOM05D006155 ORTHO05D007529 1.9e-123 446.0 253 88.1
Sopen09g033690 Solanum pennellii HOM05D006155 ORTHO05D007529 3.3e-120 435.3 228 91.7
CAN.G812.29 Capsicum annuum HOM05D006155 ORTHO05D007529 6.2e-119 431.0 253 83.8
PGSC0003DMG400001560 Solanum tuberosum HOM05D006155 ORTHO05D007529 6.2e-119 431.0 228 90.8
Peaxi162Scf00125g01318 Petunia axillaris HOM05D006155 ORTHO05D007529 2.4e-115 419.1 251 84.1
Dinv27131 Davidia involucrata HOM05D006155 ORTHO05D007529 3.5e-106 388.7 251 76.9
Lj6C638T14 Lonicera japonica HOM05D006155 ORTHO05D007529 5.6e-104 381.3 227 78.9
Oeu055271.1 Olea europaea HOM05D006155 ORTHO05D007529 7.4e-104 380.9 251 73.3
Actinidia32965 Actinidia chinensis HOM05D006155 ORTHO05D007529 1.3e-103 380.2 257 74.3
Migut.N00320 Erythranthe guttata HOM05D006155 ORTHO05D007529 1.3e-103 380.2 260 73.1
Lju2262C0T14 Lonicera japonica HOM05D006155 ORTHO05D007529 2.1e-103 379.4 227 78.4
SalBow3G4628 Salvia bowleyana HOM05D006155 ORTHO05D007529 4.8e-103 378.3 250 74.0
CSS0040589 Camellia sinensis var. sinensis HOM05D006155 ORTHO05D007529 8.2e-103 377.5 243 76.1
Ah.13g074940 Amaranthus hybridus HOM05D006155 ORTHO05D007529 1.1e-102 377.1 234 75.6
Actinidia35935 Actinidia chinensis HOM05D006155 ORTHO05D007529 1.8e-102 376.3 219 80.8
Lsat_1_v5_gn_1_76101 Lactuca sativa HOM05D006155 ORTHO05D007529 3.1e-102 375.6 249 73.5
Oeu023143.1 Olea europaea HOM05D006155 ORTHO05D007529 3.1e-102 375.6 223 77.6
DCAR_002295 Daucus carota HOM05D006155 ORTHO05D007529 4.0e-102 375.2 248 75.4
MSTRG.24647 Avicennia marina HOM05D006155 ORTHO05D007529 9.0e-102 374.0 253 71.1
Rhsim09G0042400 Rhododendron simsii HOM05D006155 ORTHO05D007529 2.0e-101 372.9 251 74.9
SGA_v2.0_scaffold285G47059 Striga asiatica HOM05D006155 ORTHO05D007529 2.6e-101 372.5 249 73.1
HanXRQChr01g0022501 Helianthus annuus HOM05D006155 ORTHO05D007529 8.4e-100 367.5 235 74.5
FvH4_4g05140 Fragaria vesca HOM05D006155 ORTHO05D007529 5.5e-99 364.8 229 74.2
CANSAT78G1287 Cannabis sativa HOM05D006155 ORTHO05D007529 7.1e-99 364.4 252 70.6
FAN12G3888 Fragaria x ananassa HOM05D006155 ORTHO05D007529 7.1e-99 364.4 229 74.2
Hma1.2p1_0042F.1_g025650 Hydrangea macrophylla HOM05D006155 ORTHO05D007529 7.1e-99 364.4 242 75.6
Haze_11491 Corylus avellana HOM05D006155 ORTHO05D007529 9.3e-99 364.0 246 72.8
arahy.Tifrunner.gnm1.ann1.NLE1X5 Arachis hypogaea HOM05D006155 ORTHO05D007529 1.2e-98 363.6 237 73.8
MD16G1230400 Malus domestica HOM05D006155 ORTHO05D007529 1.2e-98 363.6 249 70.3
Aqoxy2G03758 Aquilegia oxysepala HOM05D006155 ORTHO05D007529 2.1e-98 362.8 214 78.5
RcHm_v2.0_Chr4g0396071 Rosa chinensis HOM05D006155 ORTHO05D007529 2.7e-98 362.5 228 74.1
EL10Ac3g06713 Beta vulgaris HOM05D006155 ORTHO05D007529 3.5e-98 362.1 236 73.3
arahy.Tifrunner.gnm1.ann1.L647M7 Arachis hypogaea HOM05D006155 ORTHO05D007529 4.6e-98 361.7 237 73.4
Cfa014810 Carpinus fangiana HOM05D006155 ORTHO05D007529 6.0e-98 361.3 246 72.0
Ciclev10005577m.g Citrus clementina HOM05D006155 ORTHO05D007529 1.0e-97 360.5 251 71.3
Prupe.1G052300 Prunus persica HOM05D006155 ORTHO05D007529 1.3e-97 360.1 251 68.1
ECA248G1656 Erigeron canadensis HOM05D006155 ORTHO05D007529 3.9e-97 358.6 210 80.5
Cc03_g06750 Coffea canephora HOM05D006155 ORTHO05D007529 6.7e-97 357.8 235 72.3
Duzib151G0563 Durio zibethinus HOM05D006155 ORTHO05D007529 1.1e-96 357.1 248 71.0
COL.COLO4_15996 Corchorus olitorius HOM05D006155 ORTHO05D007529 1.9e-96 356.3 218 76.1
Manes.15G047200 Manihot esculenta HOM05D006155 ORTHO05D007529 3.3e-96 355.5 251 69.3
Gorai.011G180400 Gossypium raimondii HOM05D006155 ORTHO05D007529 4.3e-96 355.1 251 70.1
Lalb_Chr02g0150741 Lupinus albus HOM05D006155 ORTHO05D007529 5.7e-96 354.8 231 73.6
Gohir.D10G160700 Gossypium hirsutum HOM05D006155 ORTHO05D007529 9.7e-96 354.0 251 69.7
Thecc.04G268500 Theobroma cacao HOM05D006155 ORTHO05D007529 1.6e-95 353.2 253 69.6
GSVIVG01027954001 Vitis vinifera HOM05D006155 ORTHO05D007529 6.3e-95 351.3 229 72.1
TWI09G0038 Tripterygium wilfordii HOM05D006155 ORTHO05D007529 8.2e-95 350.9 250 70.0
Gohir.A10G106500 Gossypium hirsutum HOM05D006155 ORTHO05D007529 1.1e-94 350.5 251 68.9
PSO063G0276 Papaver somniferum HOM05D006155 ORTHO05D007529 1.4e-94 350.1 251 67.7
FAN17G0987 Fragaria x ananassa HOM05D006155 ORTHO05D007529 2.4e-94 349.4 241 70.5
PGR004G1196 Punica granatum HOM05D006155 ORTHO05D007529 2.4e-94 349.4 250 68.0
Sabra10G0043200 Salix brachista HOM05D006155 ORTHO05D007529 5.3e-94 348.2 248 68.5
Atru.chr4.1882 Acer truncatum HOM05D006155 ORTHO05D007529 3.4e-93 345.5 248 69.0
FAN22G1742 Fragaria x ananassa HOM05D006155 ORTHO05D007529 5.9e-93 344.7 265 64.9
Potri.010G063700 Populus trichocarpa HOM05D006155 ORTHO05D007529 5.9e-93 344.7 225 71.6
Hund20478 Selenicereus undatus HOM05D006155 ORTHO05D007529 7.6e-93 344.4 207 75.4
Nn3g19816 Nelumbo nucifera HOM05D006155 ORTHO05D007529 1.7e-92 343.2 227 73.1
Aa31LG5G4150 Aethionema arabicum HOM05D006155 ORTHO05D007529 2.9e-92 342.4 251 65.7
Medtr1g073140 Medicago truncatula HOM05D006155 ORTHO05D007529 1.1e-91 340.5 240 69.6
THA.LOC104816010 Tarenaya hassleriana HOM05D006155 ORTHO05D007529 2.5e-91 339.3 251 67.7
Carub.0004s1472 Capsella rubella HOM05D006155 ORTHO05D007529 3.2e-91 339.0 220 70.0
Glyma.20G199100 Glycine max HOM05D006155 ORTHO05D007529 5.5e-91 338.2 215 73.0
Sp4g15560 Schrenkiella parvula HOM05D006155 ORTHO05D007529 5.5e-91 338.2 250 65.6
vmacro00537 Vaccinium macrocarpon HOM05D006155 ORTHO05D007529 5.5e-91 338.2 330 55.5
CDE02G2305 Ceratophyllum demersum HOM05D006155 ORTHO05D007529 7.2e-91 337.8 229 68.1
AL4G28890 Arabidopsis lyrata HOM05D006155 ORTHO05D007529 9.3e-91 337.4 220 70.5
AT2G33255 Arabidopsis thaliana HOM05D006155 ORTHO05D007529 9.3e-91 337.4 250 66.0
Glyma.10G191200 Glycine max HOM05D006155 ORTHO05D007529 1.2e-90 337.0 215 72.6
BolC4t27754H Brassica oleracea HOM05D006155 ORTHO05D007529 2.1e-90 336.3 247 66.0
Phvul.L001872 Phaseolus vulgaris HOM05D006155 ORTHO05D007529 2.1e-90 336.3 217 73.3
Thhalv10017161m.g Eutrema salsugineum HOM05D006155 ORTHO05D007529 2.7e-90 335.9 250 65.6
BcaC02g07846 Brassica carinata HOM05D006155 ORTHO05D007529 4.6e-90 335.1 220 69.1
Eucgr.H02890 Eucalyptus grandis HOM05D006155 ORTHO05D007529 7.9e-90 334.3 214 71.5
C04p62700 Brassica napus HOM05D006155 ORTHO05D007529 1.0e-89 334.0 246 65.4
Duzib212G0768 Durio zibethinus HOM05D006155 ORTHO05D007529 1.3e-89 333.6 250 66.4
TPR.G18563 Trifolium pratense HOM05D006155 ORTHO05D007529 1.8e-89 333.2 233 69.5
BcaC02g07849 Brassica carinata HOM05D006155 ORTHO05D007529 2.3e-89 332.8 247 64.0
CARHR127260 Cardamine hirsuta HOM05D006155 ORTHO05D007529 2.3e-89 332.8 250 65.6
VMungo0720G0761 Vigna mungo HOM05D006155 ORTHO05D007529 3.0e-89 332.4 235 68.9
BraA04t18060Z Brassica rapa HOM05D006155 ORTHO05D007529 3.9e-89 332.0 250 64.0
Sed0003799 Sechium edule HOM05D006155 ORTHO05D007529 3.9e-89 332.0 231 67.5
BraA03t11126Z Brassica rapa HOM05D006155 ORTHO05D007529 6.7e-89 331.3 251 64.9
CsaV3_3G011540 Cucumis sativus L. HOM05D006155 ORTHO05D007529 6.7e-89 331.3 223 70.0
Lj5g0009281 Lotus japonicus HOM05D006155 ORTHO05D007529 6.7e-89 331.3 247 65.2
BolC3t14563H Brassica oleracea HOM05D006155 ORTHO05D007529 1.1e-88 330.5 251 63.7
MELO3C006364.2 Cucumis melo HOM05D006155 ORTHO05D007529 1.1e-88 330.5 250 64.8
A03p18670 Brassica napus HOM05D006155 ORTHO05D007529 1.5e-88 330.1 251 64.1
unitig_899.g15552 Utricularia gibba HOM05D006155 ORTHO05D007529 1.5e-88 330.1 267 62.2
ClCG05G003860 Citrullus lanatus HOM05D006155 ORTHO05D007529 1.9e-88 329.7 251 63.7
BcaC01g05849 Brassica carinata HOM05D006155 ORTHO05D007529 4.3e-88 328.6 221 67.9
C03p21810 Brassica napus HOM05D006155 ORTHO05D007529 5.7e-88 328.2 251 62.9
BcaB06g28663 Brassica carinata HOM05D006155 ORTHO05D007529 7.4e-88 327.8 243 63.8
Ca_09794_v3 Cicer arietinum L. HOM05D006155 ORTHO05D007529 1.3e-87 327.0 216 70.8
Os02g0816100 Oryza sativa ssp. japonica HOM05D006155 ORTHO05D007529 5.0e-84 315.1 248 65.3
Sed0011773 Sechium edule HOM05D006155 ORTHO05D007529 6.1e-82 308.1 215 66.0
HPP92_007421 Vanilla planifolia HOM05D006155 ORTHO05D007529 1.7e-79 300.1 198 71.7
ATR0787G199 Amborella trichopoda HOM05D006155 ORTHO05D007529 4.8e-79 298.5 207 67.6
MBI07_g08907_MAGBIO Magnolia biondii HOM05D006155 ORTHO05D007529 1.4e-78 297.0 199 72.4
Sc04g0004680 Simmondsia chinensis HOM05D006155 ORTHO05D007529 1.4e-75 287.0 207 69.6
Cpa.g.sc3.348 Carica papaya HOM05D006155 ORTHO05D007529 2.5e-75 286.2 198 71.2
Pp3c17_6550 Physcomitrium patens HOM05D006155 ORTHO05D007529 3.7e-71 272.3 225 59.1
SMO165G0032 Selaginella moellendorffii HOM05D006155 ORTHO05D007529 6.5e-68 261.5 214 58.4
Pp3c2_6750 Physcomitrium patens HOM05D006155 ORTHO05D007529 8.0e-66 254.6 224 55.4
CDE01G0085 Ceratophyllum demersum HOM05D006155 ORTHO05D007529 1.0e-65 254.2 229 55.5
TAR365G0649 Trochodendron aralioides HOM05D006155 ORTHO05D007529 3.1e-54 216.1 139 74.1
LjContig00022g0011299 Lotus japonicus HOM05D006155 ORTHO05D007529 1.2e-50 204.1 194 55.2
CiPaw.01G175800 Carya illinoinensis HOM05D006155 ORTHO05D007529 2.7e-45 186.4 101 83.2
Psat6g138760 Pisum sativum HOM05D006155 ORTHO05D007529 7.3e-43 178.3 127 66.9
MCO11G090 Micromonas commoda HOM05D006155 ORTHO05D007529 9.5e-43 177.9 213 45.5
Cre03.g193000 Chlamydomonas reinhardtii HOM05D006155 ORTHO05D007529 3.4e-40 169.5 212 42.9
SGA_v2.0_scaffold31G12610 Striga asiatica HOM05D006155 ORTHO05D007529 4.6e-37 159.1 208 44.7
SMO115G0208 Selaginella moellendorffii HOM05D006155 ORTHO05D007529 1.5e-35 154.1 213 41.3
Rhsim09G0043000 Rhododendron simsii HOM05D006155 ORTHO05D007529 4.3e-35 152.5 120 70.0
QL06p021877 Quercus lobata HOM05D006155 ORTHO05D007529 2.8e-34 149.8 103 68.0
Hma1.2p1_0042F.1_g025660 Hydrangea macrophylla HOM05D006155 ORTHO05D007529 5.8e-32 142.1 91 74.7
Hma1.2p1_0144F.1_g065125 Hydrangea macrophylla HOM05D006155 ORTHO05D007529 5.8e-32 142.1 91 74.7
AUR62035887 Chenopodium quinoa HOM05D006155 ORTHO05D007529 3.7e-31 139.4 97 69.1
Zm00001eb191500 Zea mays HOM05D006155 ORTHO05D007529 4.1e-30 136.0 123 57.7
Rhsim09G0041400 Rhododendron simsii HOM05D000030 ORTHO05D000009 4.6e-29 132.5 106 68.9
SEGI_12787 Sequoiadendron giganteum HOM05D006155 ORTHO05D007529 5.6e-27 125.6 115 56.5
Rhsim09G0048000 Rhododendron simsii HOM05D000029 ORTHO05D002162 1.8e-25 120.6 84 70.2
Lj5g0004239 Lotus japonicus HOM05D006155 ORTHO05D007529 4.0e-25 119.4 148 45.9
Lj5g0006737 Lotus japonicus HOM05D006155 ORTHO05D007529 4.0e-25 119.4 148 45.9
SEGI_32209 Sequoiadendron giganteum HOM05D006155 ORTHO05D007529 1.3e-23 114.4 84 65.5
Actinidia37388 Actinidia chinensis HOM05D006155 ORTHO05D007529 7.8e-21 105.1 60 80.0
SGA_v2.0_scaffold31G12618 Striga asiatica HOM05D006155 ORTHO05D007529 3.9e-20 102.8 188 37.2
AUR62035886 Chenopodium quinoa HOM05D006155 ORTHO05D007529 1.8e-17 94.0 52 78.8
Cre01.g025100 Chlamydomonas reinhardtii HOM05D006155 ORTHO05D007529 4.4e-16 89.4 171 32.7
SalBow7G2104 Salvia bowleyana HOM05D000708 ORTHO05D001418 1.6e-13 80.9 48 75.0
C09p23060 Brassica napus HOM05D006155 ORTHO05D007529 2.4e-09 67.0 77 50.6


User provided reference genes

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