Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0002931g0030 Nicotiana tabacum HOM05D007134 ORTHO05D009004 2.1e-182 642.1 304 100.0
Nitab4.5_0001276g0070 Nicotiana tabacum HOM05D007134 ORTHO05D009004 1.2e-169 599.7 294 97.3
Peaxi162Scf00006g04220 Petunia axillaris HOM05D007134 ORTHO05D009004 3.8e-163 578.2 308 88.3
Solyc08g077090.3 Solanum lycopersicum HOM05D007134 ORTHO05D009004 1.1e-157 560.1 296 87.2
PGSC0003DMG400017530 Solanum tuberosum HOM05D007134 ORTHO05D009004 2.2e-155 552.4 330 80.9
CAN.G1659.3 Capsicum annuum HOM05D007134 ORTHO05D009004 6.5e-155 550.8 301 84.7
Sopen08g025670 Solanum pennellii HOM05D007134 ORTHO05D009004 1.4e-154 549.7 296 86.8
CSS0021568 Camellia sinensis var. sinensis HOM05D007134 ORTHO05D009004 3.8e-131 471.9 296 71.6
Dinv28939 Davidia involucrata HOM05D007134 ORTHO05D009004 1.5e-130 469.9 298 73.2
Hma1.2p1_0991F.1_g244990 Hydrangea macrophylla HOM05D007134 ORTHO05D009004 4.2e-130 468.4 298 71.1
Hma1.2p1_2785F.1_g328490 Hydrangea macrophylla HOM05D007134 ORTHO05D009004 5.5e-130 468.0 298 70.8
Lj8A293T18 Lonicera japonica HOM05D007134 ORTHO05D009004 4.7e-129 464.9 296 72.0
Actinidia03384 Actinidia chinensis HOM05D007134 ORTHO05D009004 3.9e-128 461.8 298 70.1
MSTRG.6669 Avicennia marina HOM05D007134 ORTHO05D009004 2.9e-123 445.7 295 69.2
Cc08_g02480 Coffea canephora HOM05D007134 ORTHO05D009004 5.0e-123 444.9 288 72.2
TAR629G3531 Trochodendron aralioides HOM05D007134 ORTHO05D009004 2.5e-122 442.6 301 68.4
CiPaw.11G091800 Carya illinoinensis HOM05D007134 ORTHO05D009004 1.2e-121 440.3 299 68.6
Thecc.03G230400 Theobroma cacao HOM05D007134 ORTHO05D009004 3.6e-121 438.7 300 67.3
Cfa012416 Carpinus fangiana HOM05D007134 ORTHO05D009004 1.4e-120 436.8 299 67.9
COL.COLO4_17065 Corchorus olitorius HOM05D007134 ORTHO05D009004 1.4e-120 436.8 300 66.3
Oeu036071.3 Olea europaea HOM05D007134 ORTHO05D009004 4.0e-120 435.3 332 62.0
Prupe.5G039700 Prunus persica HOM05D007134 ORTHO05D009004 5.2e-120 434.9 298 67.1
Atru.chr6.1744 Acer truncatum HOM05D007134 ORTHO05D009004 1.7e-118 429.9 300 66.0
Potri.001G144000 Populus trichocarpa HOM05D007134 ORTHO05D009004 2.8e-118 429.1 301 66.4
Haze_08260 Corylus avellana HOM05D007134 ORTHO05D009004 3.7e-118 428.7 315 65.4
Duzib205G1618 Durio zibethinus HOM05D007134 ORTHO05D009004 4.8e-118 428.3 299 66.2
Gohir.D12G211900 Gossypium hirsutum HOM05D007134 ORTHO05D009004 1.4e-117 426.8 299 65.9
Gorai.008G227500 Gossypium raimondii HOM05D007134 ORTHO05D009004 1.4e-117 426.8 299 65.9
SGA_v2.0_scaffold34G13941 Striga asiatica HOM05D007134 ORTHO05D009004 2.4e-117 426.0 294 68.0
Aqoxy3G02427 Aquilegia oxysepala HOM05D007134 ORTHO05D009004 5.3e-117 424.9 298 67.1
GSVIVG01013189001 Vitis vinifera HOM05D007134 ORTHO05D009004 9.1e-117 424.1 289 70.2
TPR.G28658 Trifolium pratense HOM05D007134 ORTHO05D009004 1.6e-116 423.3 295 65.4
Ca_22068_v3 Cicer arietinum L. HOM05D007134 ORTHO05D009004 2.7e-116 422.5 297 65.0
Sc01g0007540 Simmondsia chinensis HOM05D007134 ORTHO05D009004 2.7e-116 422.5 299 64.5
Psat4g079040 Pisum sativum HOM05D007134 ORTHO05D009004 5.9e-116 421.4 291 66.3
Manes.15G172000 Manihot esculenta HOM05D007134 ORTHO05D009004 1.3e-115 420.2 299 65.2
MD06G1032400 Malus domestica HOM05D007134 ORTHO05D009004 1.7e-115 419.9 295 66.4
EL10Ac5g12144 Beta vulgaris HOM05D007134 ORTHO05D009004 2.2e-115 419.5 292 66.1
RcHm_v2.0_Chr7g0209231 Rosa chinensis HOM05D007134 ORTHO05D009004 2.9e-115 419.1 294 66.0
ClCG10G001760 Citrullus lanatus HOM05D007134 ORTHO05D009004 3.8e-115 418.7 297 65.3
TWI81G0484 Tripterygium wilfordii HOM05D007134 ORTHO05D009004 5.0e-115 418.3 301 65.4
CANSAT21G0276 Cannabis sativa HOM05D007134 ORTHO05D009004 8.5e-115 417.5 300 65.3
AUR62007266 Chenopodium quinoa HOM05D007134 ORTHO05D009004 8.5e-115 417.5 296 65.5
PSO782G3567 Papaver somniferum HOM05D007134 ORTHO05D009004 8.5e-115 417.5 300 64.7
MELO3C013860.2 Cucumis melo HOM05D007134 ORTHO05D009004 1.1e-114 417.2 295 63.1
ECA233G0754 Erigeron canadensis HOM05D007134 ORTHO05D009004 1.9e-114 416.4 296 66.2
Phvul.003G230000 Phaseolus vulgaris HOM05D007134 ORTHO05D009004 7.2e-114 414.5 295 64.7
Sabra01G0112400 Salix brachista HOM05D007134 ORTHO05D009004 7.2e-114 414.5 332 60.5
Lsat_1_v5_gn_6_64760 Lactuca sativa HOM05D007134 ORTHO05D009004 4.7e-113 411.8 295 66.1
FAN08G2031 Fragaria x ananassa HOM05D007134 ORTHO05D009004 6.1e-113 411.4 299 65.6
SalBow7G3039 Salvia bowleyana HOM05D007134 ORTHO05D009004 8.0e-113 411.0 298 64.1
Lalb_Chr05g0220571 Lupinus albus HOM05D007134 ORTHO05D009004 1.0e-112 410.6 297 64.0
Lj4g0007831 Lotus japonicus HOM05D007134 ORTHO05D009004 2.3e-112 409.5 297 63.0
Glyma.05G112400 Glycine max HOM05D007134 ORTHO05D009004 6.8e-112 407.9 295 64.1
CDE12G0960 Ceratophyllum demersum HOM05D007134 ORTHO05D009004 8.8e-112 407.5 291 67.4
CsaV3_3G001860 Cucumis sativus L. HOM05D007134 ORTHO05D009004 8.8e-112 407.5 287 63.8
THA.LOC104814437 Tarenaya hassleriana HOM05D007134 ORTHO05D009004 8.8e-112 407.5 289 63.7
FvH4_5g21740 Fragaria vesca HOM05D007134 ORTHO05D009004 1.2e-111 407.1 299 64.9
FAN13G3184 Fragaria x ananassa HOM05D007134 ORTHO05D009004 4.4e-111 405.2 299 64.9
arahy.Tifrunner.gnm1.ann1.2XNM6Q Arachis hypogaea HOM05D007134 ORTHO05D009004 5.7e-111 404.8 298 64.4
PGR042G2424 Punica granatum HOM05D007134 ORTHO05D009004 1.7e-110 403.3 299 62.5
Glyma.17G154600 Glycine max HOM05D007134 ORTHO05D009004 2.2e-110 402.9 296 63.2
SalBow7G1996 Salvia bowleyana HOM05D007134 ORTHO05D009004 2.2e-110 402.9 292 64.0
Ah.12g054890 Amaranthus hybridus HOM05D007134 ORTHO05D009004 2.8e-110 402.5 301 63.1
Aa31LG9G15330 Aethionema arabicum HOM05D007134 ORTHO05D009004 3.7e-110 402.1 291 63.6
DCAR_032214 Daucus carota HOM05D007134 ORTHO05D009004 8.3e-110 401.0 303 63.4
arahy.Tifrunner.gnm1.ann1.40JZG2 Arachis hypogaea HOM05D007134 ORTHO05D009004 1.4e-109 400.2 298 63.8
Sed0020644 Sechium edule HOM05D007134 ORTHO05D009004 1.4e-109 400.2 298 62.4
Ciclev10032247m.g Citrus clementina HOM05D007134 ORTHO05D009004 1.8e-109 399.8 293 64.2
Carub.0004s1701 Capsella rubella HOM05D007134 ORTHO05D009004 2.7e-108 396.0 289 63.7
Rhsim11G0013400 Rhododendron simsii HOM05D007134 ORTHO05D009004 2.7e-108 396.0 414 49.8
Eucgr.E00292 Eucalyptus grandis HOM05D007134 ORTHO05D009004 3.5e-108 395.6 289 63.3
CDE04G0512 Ceratophyllum demersum HOM05D007134 ORTHO05D009004 7.7e-108 394.4 294 66.0
FAN18G1678 Fragaria x ananassa HOM05D007134 ORTHO05D009004 7.7e-108 394.4 324 59.9
AT2G35320 Arabidopsis thaliana HOM05D007134 ORTHO05D009004 1.3e-107 393.7 292 62.3
Migut.M00165 Erythranthe guttata HOM05D007134 ORTHO05D009004 1.7e-107 393.3 300 61.0
AL4G31350 Arabidopsis lyrata HOM05D007134 ORTHO05D009004 3.8e-107 392.1 289 63.3
HanXRQChr06g0178411 Helianthus annuus HOM05D007134 ORTHO05D009004 6.6e-107 391.3 298 63.1
AL457U10010 Arabidopsis lyrata HOM05D007134 ORTHO05D009004 3.3e-106 389.0 289 63.0
ATR0049G037 Amborella trichopoda HOM05D007134 ORTHO05D009004 4.2e-106 388.7 300 60.7
A03p19520 Brassica napus HOM05D007134 ORTHO05D009004 5.5e-106 388.3 292 62.7
BraA03t11205Z Brassica rapa HOM05D007134 ORTHO05D009004 5.5e-106 388.3 292 62.7
Thhalv10016981m.g Eutrema salsugineum HOM05D007134 ORTHO05D009004 9.5e-106 387.5 290 61.4
C03p22750 Brassica napus HOM05D007134 ORTHO05D009004 1.2e-105 387.1 292 61.6
Sp4g17520 Schrenkiella parvula HOM05D007134 ORTHO05D009004 1.2e-105 387.1 292 61.3
Gohir.A12G209200 Gossypium hirsutum HOM05D007134 ORTHO05D009004 1.8e-104 383.3 263 67.7
CARHR129460 Cardamine hirsuta HOM05D007134 ORTHO05D009004 4.0e-104 382.1 289 60.6
Hund11255 Selenicereus undatus HOM05D007134 ORTHO05D009004 6.8e-104 381.3 317 58.7
unitig_749.g14086 Utricularia gibba HOM05D007134 ORTHO05D009004 6.8e-104 381.3 298 60.7
BolC3t14673H Brassica oleracea HOM05D007134 ORTHO05D009004 1.5e-103 380.2 292 61.3
Nn6g33621 Nelumbo nucifera HOM05D007134 ORTHO05D009004 3.5e-100 369.0 297 60.3
vmacro00339 Vaccinium macrocarpon HOM05D007134 ORTHO05D009004 1.1e-98 364.0 437 45.3
Zm00001eb417090 Zea mays HOM05D007134 ORTHO05D009004 1.0e-96 357.5 294 57.8
Os06g0110100 Oryza sativa ssp. japonica HOM05D007134 ORTHO05D009004 1.5e-95 353.6 293 57.7
AUR62018733 Chenopodium quinoa HOM05D007134 ORTHO05D009004 1.6e-92 343.6 296 54.7
FAN04G0135 Fragaria x ananassa HOM05D007134 ORTHO05D009004 1.5e-90 337.0 299 56.9
PSO063G6706 Papaver somniferum HOM05D007134 ORTHO05D009004 1.5e-90 337.0 297 53.9
BcaC01g05731 Brassica carinata HOM05D007134 ORTHO05D009004 1.8e-88 330.1 292 54.8
Medtr4g098510 Medicago truncatula HOM05D007134 ORTHO05D009004 5.8e-79 298.5 221 63.8
Pp3c2_15970 Physcomitrium patens HOM05D007134 ORTHO05D009004 5.1e-75 285.4 292 47.3
AagrBONN_evm.TU.Sc2ySwM_117.2263 Anthoceros agrestis HOM05D007134 ORTHO05D009004 5.2e-72 275.4 303 43.9
VMungo0251G0669 Vigna mungo HOM05D007134 ORTHO05D009004 3.8e-62 242.7 199 58.8
Pp3c1_31250 Physcomitrium patens HOM05D007134 ORTHO05D009004 1.9e-61 240.4 299 40.1
Pp3c2_10940 Physcomitrium patens HOM05D007134 ORTHO05D009004 1.1e-56 224.6 292 41.8
QL12p006104 Quercus lobata HOM05D007134 ORTHO05D009004 3.9e-51 206.1 150 66.0
Pp3c17_17110 Physcomitrium patens HOM05D007134 ORTHO05D009004 5.6e-50 202.2 269 39.0
VMungo0251G0585 Vigna mungo HOM05D007134 ORTHO05D009004 1.9e-42 177.2 114 69.3
SEGI_12545 Sequoiadendron giganteum HOM05D007134 ORTHO05D009004 1.2e-36 157.9 114 63.2
Cpa.g.sc71.65 Carica papaya HOM05D007134 ORTHO05D009004 1.7e-30 137.5 85 65.9
Nn6g33134 Nelumbo nucifera HOM05D007134 ORTHO05D009004 7.7e-07 58.9 68 54.4


User provided reference genes

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