Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0002930g0030 Nicotiana tabacum HOM05D007238 ORTHO05D009206 1.8e-277 958.7 528 100.0
Nitab4.5_0000030g0130 Nicotiana tabacum HOM05D007238 ORTHO05D009206 3.0e-256 888.3 531 93.2
Solyc08g075760.3 Solanum lycopersicum HOM05D007238 ORTHO05D009206 2.4e-221 772.3 534 83.9
Sopen08g024410 Solanum pennellii HOM05D007238 ORTHO05D009206 4.0e-221 771.5 534 83.7
PGSC0003DMG400030852 Solanum tuberosum HOM05D007238 ORTHO05D009206 5.1e-216 754.6 539 82.0
CAN.G1363.6 Capsicum annuum HOM05D007238 ORTHO05D009206 8.2e-214 747.3 506 83.2
Peaxi162Scf02295g00022 Petunia axillaris HOM05D007238 ORTHO05D009206 3.2e-178 629.0 531 71.8
Dinv22874 Davidia involucrata HOM05D007238 ORTHO05D009206 2.3e-160 569.7 507 64.9
Dinv28012 Davidia involucrata HOM05D007238 ORTHO05D009206 2.8e-153 546.2 503 61.8
CSS0038403 Camellia sinensis var. sinensis HOM05D007238 ORTHO05D009206 3.6e-153 545.8 505 62.4
GSVIVG01022787001 Vitis vinifera HOM05D007238 ORTHO05D009206 3.6e-153 545.8 502 61.4
Atru.chr6.1480 Acer truncatum HOM05D007238 ORTHO05D009206 1.0e-147 527.7 501 60.7
Cc08_g05060 Coffea canephora HOM05D007238 ORTHO05D009206 3.9e-147 525.8 505 61.0
Actinidia01264 Actinidia chinensis HOM05D007238 ORTHO05D009206 8.1e-145 518.1 503 58.8
Thecc.03G317700 Theobroma cacao HOM05D007238 ORTHO05D009206 1.4e-141 507.3 501 58.9
Potri.001G130800 Populus trichocarpa HOM05D007238 ORTHO05D009206 4.1e-141 505.8 504 58.9
Oeu046801.1 Olea europaea HOM05D007238 ORTHO05D009206 3.5e-140 502.7 504 58.7
Lj8C334G11 Lonicera japonica HOM05D007238 ORTHO05D009206 1.1e-138 497.7 527 57.7
Ciclev10000885m.g Citrus clementina HOM05D007238 ORTHO05D009206 9.5e-138 494.6 501 58.1
Gohir.D12G205200 Gossypium hirsutum HOM05D007238 ORTHO05D009206 6.2e-137 491.9 501 57.3
Potri.003G103100 Populus trichocarpa HOM05D007238 ORTHO05D009206 1.4e-133 480.7 503 57.1
Manes.17G003400 Manihot esculenta HOM05D007238 ORTHO05D009206 5.4e-133 478.8 507 57.8
Gorai.008G220100 Gossypium raimondii HOM05D007238 ORTHO05D009206 2.7e-132 476.5 501 55.9
Gohir.A12G202500 Gossypium hirsutum HOM05D007238 ORTHO05D009206 7.8e-132 474.9 501 55.7
CiPaw.12G071800 Carya illinoinensis HOM05D007238 ORTHO05D009206 3.9e-131 472.6 501 55.3
RcHm_v2.0_Chr7g0213421 Rosa chinensis HOM05D007238 ORTHO05D009206 3.9e-131 472.6 503 56.7
Aqoxy3G02024 Aquilegia oxysepala HOM05D007238 ORTHO05D009206 1.9e-130 470.3 508 56.9
TWI36G0279 Tripterygium wilfordii HOM05D007238 ORTHO05D009206 2.1e-129 466.8 502 55.2
CANSAT21G2527 Cannabis sativa HOM05D007238 ORTHO05D009206 2.8e-129 466.5 531 55.0
FvH4_5g23980 Fragaria vesca HOM05D007238 ORTHO05D009206 2.8e-129 466.5 503 56.3
TAR629G0677 Trochodendron aralioides HOM05D007238 ORTHO05D009206 2.8e-129 466.5 504 55.4
FAN13G1136 Fragaria x ananassa HOM05D007238 ORTHO05D009206 2.4e-128 463.4 503 55.9
Duzib205G0751 Durio zibethinus HOM05D007238 ORTHO05D009206 2.6e-127 459.9 555 51.4
Eucgr.D02592 Eucalyptus grandis HOM05D007238 ORTHO05D009206 1.7e-126 457.2 501 55.5
Sabra03G0070300 Salix brachista HOM05D007238 ORTHO05D009206 1.0e-123 448.0 525 53.1
Sed0015204 Sechium edule HOM05D007238 ORTHO05D009206 6.6e-123 445.3 504 53.2
MD00G1002000 Malus domestica HOM05D007238 ORTHO05D009206 2.1e-121 440.3 503 54.9
FAN18G0294 Fragaria x ananassa HOM05D007238 ORTHO05D009206 8.1e-121 438.3 563 50.3
TWI56G0348 Tripterygium wilfordii HOM05D007238 ORTHO05D009206 1.1e-120 438.0 502 53.2
FAN18G2161 Fragaria x ananassa HOM05D007238 ORTHO05D009206 2.4e-120 436.8 564 50.4
ECA233G5138 Erigeron canadensis HOM05D007238 ORTHO05D009206 3.1e-120 436.4 503 53.1
FAN08G1858 Fragaria x ananassa HOM05D007238 ORTHO05D009206 3.1e-120 436.4 563 50.1
Actinidia32774 Actinidia chinensis HOM05D007238 ORTHO05D009206 2.6e-119 433.3 502 53.0
HanXRQChr03g0081381 Helianthus annuus HOM05D007238 ORTHO05D009206 1.9e-117 427.2 504 53.0
CsaV3_3G001050 Cucumis sativus L. HOM05D007238 ORTHO05D009206 7.1e-117 425.2 475 53.7
MD06G1015600 Malus domestica HOM05D007238 ORTHO05D009206 1.8e-115 420.6 502 53.0
Lsat_1_v5_gn_3_92801 Lactuca sativa HOM05D007238 ORTHO05D009206 1.6e-113 414.1 503 52.7
PGR031G3591 Punica granatum HOM05D007238 ORTHO05D009206 8.4e-110 401.7 435 58.4
Cfa012591 Carpinus fangiana HOM05D007238 ORTHO05D009206 1.1e-109 401.4 435 55.2
Haze_08066 Corylus avellana HOM05D007238 ORTHO05D009206 4.6e-108 396.0 587 46.0
PSO063G0400 Papaver somniferum HOM05D007238 ORTHO05D009206 1.0e-107 394.8 534 52.1
DCAR_008182 Daucus carota HOM05D007238 ORTHO05D009206 1.3e-107 394.4 521 49.3
Rhsim11G0025000 Rhododendron simsii HOM05D007238 ORTHO05D009206 6.7e-107 392.1 458 53.7
ClCG10G001020 Citrullus lanatus HOM05D007238 ORTHO05D009206 8.7e-107 391.7 503 48.3
Medtr5g026850 Medicago truncatula HOM05D007238 ORTHO05D009206 1.1e-104 384.8 513 51.5
Lj2g0008424 Lotus japonicus HOM05D007238 ORTHO05D009206 4.0e-104 382.9 505 49.7
Glyma.09G213700 Glycine max HOM05D007238 ORTHO05D009206 6.9e-104 382.1 510 50.2
Glyma.01G149500 Glycine max HOM05D007238 ORTHO05D009206 4.5e-103 379.4 510 50.2
VMungo1215G3455 Vigna mungo HOM05D007238 ORTHO05D009206 5.8e-103 379.0 509 50.1
TPR.G17266 Trifolium pratense HOM05D007238 ORTHO05D009206 1.4e-101 374.4 510 49.4
Migut.E01348 Erythranthe guttata HOM05D007238 ORTHO05D009206 1.9e-101 374.0 477 52.4
Lalb_Chr05g0215441 Lupinus albus HOM05D007238 ORTHO05D009206 2.5e-101 373.6 508 49.4
arahy.Tifrunner.gnm1.ann1.0046K4 Arachis hypogaea HOM05D007238 ORTHO05D009206 5.5e-101 372.5 512 48.6
arahy.Tifrunner.gnm1.ann1.BJTL8K Arachis hypogaea HOM05D007238 ORTHO05D009206 5.5e-101 372.5 512 48.6
Phvul.002G128600 Phaseolus vulgaris HOM05D007238 ORTHO05D009206 1.3e-99 367.9 506 48.4
Ca_25102_v3 Cicer arietinum L. HOM05D007238 ORTHO05D009206 1.1e-98 364.8 509 49.5
Prupe.5G020000 Prunus persica HOM05D007238 ORTHO05D009206 1.5e-98 364.4 449 50.6
DCAR_004239 Daucus carota HOM05D007238 ORTHO05D009206 5.7e-98 362.5 471 49.9
Zm00001eb378870 Zea mays HOM05D007238 ORTHO05D009206 5.9e-95 352.4 500 48.6
ATR0829G060 Amborella trichopoda HOM05D007238 ORTHO05D009206 2.2e-94 350.5 535 45.6
Os06g0115600 Oryza sativa ssp. japonica HOM05D007238 ORTHO05D009206 1.9e-93 347.4 499 47.1
MELO3C013794.2 Cucumis melo HOM05D007238 ORTHO05D009206 2.7e-92 343.6 358 57.0
SalBow8G0140 Salvia bowleyana HOM05D007238 ORTHO05D009206 5.7e-90 335.9 418 53.6
vmacro00062 Vaccinium macrocarpon HOM05D007238 ORTHO05D009206 1.4e-88 331.3 375 56.8
FAN04G0931 Fragaria x ananassa HOM05D007238 ORTHO05D009206 5.3e-88 329.3 427 49.9
Zm00001eb269110 Zea mays HOM05D007238 ORTHO05D009206 9.1e-88 328.6 511 45.2
PSO782G1267 Papaver somniferum HOM05D007238 ORTHO05D009206 1.3e-78 298.1 445 50.3
Psat2g142200 Pisum sativum HOM05D007238 ORTHO05D009206 4.7e-68 263.1 390 45.4
Hma1.2p1_1933F.1_g308070 Hydrangea macrophylla HOM05D007238 ORTHO05D009206 8.0e-68 262.3 259 59.5
Cpa.g.sc90.44 Carica papaya HOM05D007238 ORTHO05D009206 4.8e-57 226.5 323 46.7
PSO782G4691 Papaver somniferum HOM05D007238 ORTHO05D009206 2.3e-43 181.0 318 43.4
HanXRQChr03g0081161 Helianthus annuus HOM05D007238 ORTHO05D009206 7.0e-40 169.5 315 41.9
HPP92_002457 Vanilla planifolia HOM05D000907 ORTHO05D000753 2.3e-30 137.9 242 40.1
Pp3c23_22500 Physcomitrium patens HOM05D007238 ORTHO05D009206 3.6e-28 130.6 554 30.5
SEGI_26764 Sequoiadendron giganteum HOM05D007238 ORTHO05D009206 8.1e-28 129.4 170 47.1
SEGI_10751 Sequoiadendron giganteum HOM05D007238 ORTHO05D009206 1.1e-27 129.0 311 35.4
HPP92_025938 Vanilla planifolia HOM05D007238 ORTHO05D009206 1.4e-24 118.6 496 28.6
Duzib068G0324 Durio zibethinus HOM05D007238 ORTHO05D009206 3.2e-24 117.5 79 79.7
HanXRQChr17g0554671 Helianthus annuus HOM05D007238 ORTHO05D009206 1.2e-23 115.5 186 48.4
SEGI_32460 Sequoiadendron giganteum HOM05D007238 ORTHO05D009206 9.6e-21 105.9 76 75.0
HPP92_022728 Vanilla planifolia HOM05D007238 ORTHO05D009206 1.2e-20 105.5 235 34.9
Hma1.2p1_0544F.1_g175540 Hydrangea macrophylla HOM05D007238 ORTHO05D009206 1.5e-18 98.6 66 69.7
CSS0023317 Camellia sinensis var. sinensis HOM05D007238 ORTHO05D009206 9.9e-18 95.9 53 92.5
HanXRQChr03g0081141 Helianthus annuus HOM05D007238 ORTHO05D009206 3.8e-17 94.0 67 68.7
HanXRQChr09g0247011 Helianthus annuus HOM05D007238 ORTHO05D009206 1.9e-13 81.6 60 73.3
Cpa.g.sc90.43 Carica papaya HOM05D007238 ORTHO05D009206 2.5e-13 81.3 66 62.1
Actinidia14160 Actinidia chinensis HOM05D007238 ORTHO05D009206 2.8e-12 77.8 81 59.3
arahy.Tifrunner.gnm1.ann1.DKTU9V Arachis hypogaea HOM05D007238 ORTHO05D009206 9.0e-11 72.8 294 29.6
AagrBONN_evm.TU.Sc2ySwM_228.587 Anthoceros agrestis HOM05D007238 ORTHO05D009206 1.2e-10 72.4 83 54.2
arahy.Tifrunner.gnm1.ann1.HBQ3NA Arachis hypogaea HOM05D007238 ORTHO05D009206 3.4e-10 70.9 85 47.1
arahy.Tifrunner.gnm1.ann1.M9N5E0 Arachis hypogaea HOM05D007238 ORTHO05D009206 3.4e-10 70.9 85 47.1
FvH4_5g27460 Fragaria vesca HOM05D007238 ORTHO05D009206 7.9e-07 59.7 46 67.4
HanXRQChr03g0081151 Helianthus annuus HOM05D007238 ORTHO05D009206 1.3e-06 58.9 54 57.4
FvH4_5g27461 Fragaria vesca HOM05D007238 ORTHO05D009206 5.1e-06 57.0 64 51.6


User provided reference genes

Program Settings