Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0002908g0140 Nicotiana tabacum HOM05D002262 ORTHO05D000137 3.3e-74 281.6 137 100.0
Nitab4.5_0000677g0160 Nicotiana tabacum HOM05D002262 ORTHO05D000482 2.7e-44 182.2 208 52.9
Nitab4.5_0001299g0110 Nicotiana tabacum HOM05D002262 ORTHO05D000482 1.4e-37 159.8 232 44.4
Nitab4.5_0000026g0260 Nicotiana tabacum HOM05D002262 ORTHO05D000137 2.6e-34 149.1 122 65.6
Nitab4.5_0001614g0170 Nicotiana tabacum HOM05D002262 ORTHO05D000137 7.4e-34 147.5 123 64.2
Nitab4.5_0000832g0150 Nicotiana tabacum HOM05D002262 ORTHO05D000137 6.3e-33 144.4 122 65.6
Nitab4.5_0001889g0010 Nicotiana tabacum HOM05D002262 ORTHO05D000137 9.1e-32 140.6 183 47.0
Nitab4.5_0003021g0050 Nicotiana tabacum HOM05D002262 ORTHO05D000482 2.2e-30 136.0 112 63.4
Nitab4.5_0000340g0010 Nicotiana tabacum HOM05D002262 ORTHO05D000137 1.2e-28 130.2 77 79.2
Nitab4.5_0002534g0070 Nicotiana tabacum HOM05D002262 ORTHO05D000137 1.1e-26 123.6 125 58.4
Nitab4.5_0000902g0220 Nicotiana tabacum HOM05D002262 ORTHO05D000137 2.8e-25 119.0 149 47.0
Nitab4.5_0001425g0050 Nicotiana tabacum HOM05D002262 ORTHO05D000137 9.1e-24 114.0 119 58.0
Nitab4.5_0005641g0040 Nicotiana tabacum HOM05D002262 ORTHO05D000137 6.5e-22 107.8 96 60.4
Nitab4.5_0002642g0150 Nicotiana tabacum HOM05D002262 ORTHO05D000137 8.5e-22 107.5 76 69.7
Nitab4.5_0000646g0230 Nicotiana tabacum HOM05D002262 ORTHO05D000482 2.1e-20 102.8 104 56.7
Nitab4.5_0003994g0040 Nicotiana tabacum HOM05D002262 ORTHO05D000137 4.7e-20 101.7 49 91.8
Nitab4.5_0008561g0020 Nicotiana tabacum HOM05D002262 ORTHO05D000137 8.0e-20 100.9 161 39.1
Nitab4.5_0000665g0010 Nicotiana tabacum HOM05D002262 ORTHO05D000137 1.0e-19 100.5 48 93.8
Nitab4.5_0001969g0010 Nicotiana tabacum HOM05D002262 ORTHO05D000482 1.8e-19 99.8 49 91.8
Nitab4.5_0004940g0100 Nicotiana tabacum HOM05D002262 ORTHO05D000137 1.8e-19 99.8 47 95.7
Nitab4.5_0002352g0090 Nicotiana tabacum HOM05D002262 ORTHO05D000482 3.0e-19 99.0 47 93.6
Nitab4.5_0000823g0040 Nicotiana tabacum HOM05D002262 ORTHO05D000482 5.2e-19 98.2 63 76.2
Nitab4.5_0011275g0020 Nicotiana tabacum HOM05D002262 ORTHO05D000137 5.2e-19 98.2 48 91.7
Nitab4.5_0001439g0130 Nicotiana tabacum HOM05D002262 ORTHO05D016873 6.8e-19 97.8 49 89.8
Nitab4.5_0006678g0030 Nicotiana tabacum HOM05D002262 ORTHO05D000482 3.4e-18 95.5 111 53.2
Nitab4.5_0014346g0010 Nicotiana tabacum HOM05D002262 ORTHO05D000482 3.4e-18 95.5 48 91.7
Nitab4.5_0014959g0010 Nicotiana tabacum HOM05D002262 ORTHO05D000137 3.4e-18 95.5 62 74.2
Nitab4.5_0018223g0020 Nicotiana tabacum HOM05D002262 ORTHO05D000137 3.4e-18 95.5 47 87.2
Nitab4.5_0000864g0170 Nicotiana tabacum HOM05D002262 ORTHO05D000137 4.4e-18 95.1 48 87.5
Nitab4.5_0002311g0170 Nicotiana tabacum HOM05D002262 ORTHO05D000137 4.4e-18 95.1 62 72.6
Nitab4.5_0000125g0020 Nicotiana tabacum HOM05D002262 ORTHO05D000137 5.7e-18 94.7 48 87.5
Nitab4.5_0002414g0070 Nicotiana tabacum HOM05D002262 ORTHO05D000137 5.7e-18 94.7 178 37.1
Nitab4.5_0000074g0160 Nicotiana tabacum HOM05D002262 ORTHO05D000137 9.7e-18 94.0 79 67.1
Nitab4.5_0000098g0180 Nicotiana tabacum HOM05D002262 ORTHO05D000482 9.7e-18 94.0 48 89.6
Nitab4.5_0000255g0040 Nicotiana tabacum HOM05D002262 ORTHO05D000137 9.7e-18 94.0 165 38.2
Nitab4.5_0001843g0200 Nicotiana tabacum HOM05D002262 ORTHO05D000137 9.7e-18 94.0 213 36.2
Nitab4.5_0003966g0020 Nicotiana tabacum HOM05D002262 ORTHO05D000482 1.3e-17 93.6 74 68.9
Nitab4.5_0002432g0010 Nicotiana tabacum HOM05D002262 ORTHO05D000137 2.2e-17 92.8 47 87.2
Nitab4.5_0017747g0010 Nicotiana tabacum HOM05D002262 ORTHO05D000137 2.8e-17 92.4 46 89.1
Nitab4.5_0000839g0190 Nicotiana tabacum HOM05D002262 ORTHO05D000482 3.7e-17 92.0 178 36.5
Nitab4.5_0005382g0060 Nicotiana tabacum HOM05D002262 ORTHO05D000482 3.7e-17 92.0 48 85.4
Nitab4.5_0003069g0070 Nicotiana tabacum HOM05D002262 ORTHO05D000137 6.3e-17 91.3 48 83.3
Nitab4.5_0002052g0050 Nicotiana tabacum HOM05D002262 ORTHO05D000137 1.4e-16 90.1 53 84.9
Nitab4.5_0001707g0040 Nicotiana tabacum HOM05D002262 ORTHO05D000137 1.8e-16 89.7 46 89.1
Nitab4.5_0000403g0050 Nicotiana tabacum HOM05D002262 ORTHO05D000482 1.6e-15 86.7 46 84.8
Nitab4.5_0016899g0020 Nicotiana tabacum HOM05D002262 ORTHO05D000137 2.7e-15 85.9 48 83.3
Nitab4.5_0020511g0010 Nicotiana tabacum HOM05D002262 ORTHO05D000137 5.9e-15 84.7 99 52.5
Nitab4.5_0001992g0080 Nicotiana tabacum HOM05D002262 ORTHO05D000137 1.7e-14 83.2 47 80.9
Nitab4.5_0013466g0020 Nicotiana tabacum HOM05D002262 ORTHO05D000137 1.7e-14 83.2 43 90.7
Nitab4.5_0000125g0070 Nicotiana tabacum HOM05D002262 ORTHO05D000137 2.2e-14 82.8 58 67.2
Nitab4.5_0024778g0010 Nicotiana tabacum HOM05D002262 ORTHO05D000137 8.5e-14 80.9 44 84.1
Nitab4.5_0001146g0070 Nicotiana tabacum HOM05D002262 ORTHO05D000137 1.1e-13 80.5 40 90.0
Nitab4.5_0001259g0080 Nicotiana tabacum HOM05D002262 ORTHO05D000137 3.2e-13 79.0 45 80.0
Nitab4.5_0001114g0080 Nicotiana tabacum HOM05D002262 ORTHO05D000137 9.4e-13 77.4 40 87.5
Nitab4.5_0002311g0110 Nicotiana tabacum HOM05D002262 ORTHO05D000137 3.4e-10 68.9 48 79.2
Peaxi162Scf01337g00004 Petunia axillaris HOM05D002262 ORTHO05D000137 4.4e-10 68.6 46 65.2
Peaxi162Scf01375g00006 Petunia axillaris HOM05D002262 ORTHO05D000137 7.5e-10 67.8 45 66.7
Nitab4.5_0000034g0080 Nicotiana tabacum HOM05D002262 ORTHO05D000137 9.8e-10 67.4 50 68.0
Nitab4.5_0001057g0220 Nicotiana tabacum HOM05D002262 ORTHO05D000137 2.8e-09 65.9 47 72.3
Nitab4.5_0000864g0190 Nicotiana tabacum HOM05D025895 ORTHO05D000137 3.7e-09 65.5 44 75.0
Nitab4.5_0000219g0070 Nicotiana tabacum HOM05D002262 ORTHO05D000137 4.8e-09 65.1 45 66.7
Nitab4.5_0001771g0040 Nicotiana tabacum HOM05D002262 ORTHO05D000137 8.3e-09 64.3 32 87.5
CAN.G1469.2 Capsicum annuum HOM05D002262 ORTHO05D000137 1.1e-08 63.9 44 59.1
Nitab4.5_0001177g0110 Nicotiana tabacum HOM05D002262 ORTHO05D000137 3.1e-08 62.4 76 52.6
Nitab4.5_0000034g0070 Nicotiana tabacum HOM05D002262 ORTHO05D000137 7.0e-08 61.2 31 87.1
Nitab4.5_0000377g0020 Nicotiana tabacum HOM05D002262 ORTHO05D000137 7.0e-08 61.2 31 90.3
CAN.G77.20 Capsicum annuum HOM05D005063 ORTHO05D000137 2.0e-07 59.7 45 53.3
Nitab4.5_0000229g0060 Nicotiana tabacum HOM05D008108 ORTHO05D000137 2.0e-07 59.7 69 44.9
Nitab4.5_0004040g0050 Nicotiana tabacum HOM05D002262 ORTHO05D000137 4.5e-07 58.5 33 81.8
ATR0441G001 Amborella trichopoda HOM05D008721 ORTHO05D000137 1.0e-06 57.4 46 56.5
CANSAT21G0858 Cannabis sativa HOM05D008721 ORTHO05D000137 1.0e-06 57.4 45 57.8
CANSAT25G0487 Cannabis sativa HOM05D008721 ORTHO05D000137 1.0e-06 57.4 45 57.8
PGSC0003DMG400023258 Solanum tuberosum HOM05D000541 ORTHO05D000137 1.0e-06 57.4 49 49.0
CANSAT35G0046 Cannabis sativa HOM05D000679 ORTHO05D000137 1.7e-06 56.6 46 54.3
CANSAT78G1843 Cannabis sativa HOM05D008721 ORTHO05D000137 1.7e-06 56.6 46 56.5
Nitab4.5_0000288g0080 Nicotiana tabacum HOM05D002262 ORTHO05D000482 1.7e-06 56.6 42 61.9
Nitab4.5_0005273g0030 Nicotiana tabacum HOM05D002262 ORTHO05D000137 1.7e-06 56.6 28 85.7
Peaxi162Scf00002g00513 Petunia axillaris HOM05D002262 ORTHO05D000137 1.7e-06 56.6 45 62.2
Sopen01g017990 Solanum pennellii HOM05D000541 ORTHO05D000137 1.7e-06 56.6 72 36.1
Sopen05g020660 Solanum pennellii HOM05D000541 ORTHO05D000137 1.7e-06 56.6 72 36.1
PGSC0003DMG400027246 Solanum tuberosum HOM05D000541 ORTHO05D000137 1.7e-06 56.6 72 40.3
Nitab4.5_0001614g0130 Nicotiana tabacum HOM05D002262 ORTHO05D000482 2.3e-06 56.2 31 80.6
CANSAT11G0393 Cannabis sativa HOM05D008721 ORTHO05D000137 2.9e-06 55.8 45 55.6
CANSAT11G1859 Cannabis sativa HOM05D008721 ORTHO05D000137 2.9e-06 55.8 45 55.6
CANSAT21G0642 Cannabis sativa HOM05D008721 ORTHO05D000137 2.9e-06 55.8 45 55.6
CANSAT21G2500 Cannabis sativa HOM05D008721 ORTHO05D000137 2.9e-06 55.8 45 55.6
CANSAT25G3227 Cannabis sativa HOM05D008721 ORTHO05D000137 2.9e-06 55.8 45 55.6
CANSAT54G1761 Cannabis sativa HOM05D008721 ORTHO05D000137 2.9e-06 55.8 45 55.6
CAN.G1235.16 Capsicum annuum HOM05D000541 ORTHO05D000137 5.0e-06 55.1 82 34.1
Solyc07g018397.1 Solanum lycopersicum HOM05D009268 ORTHO05D011733 5.0e-06 55.1 69 40.6
PGSC0003DMG400003940 Solanum tuberosum HOM05D000541 ORTHO05D000137 5.0e-06 55.1 70 38.6
Nitab4.5_0005484g0010 Nicotiana tabacum HOM05D005063 ORTHO05D016873 6.6e-06 54.7 45 60.0
Peaxi162Scf00048g01514 Petunia axillaris HOM05D010453 ORTHO05D012004 6.6e-06 54.7 46 52.2
Peaxi162Scf00130g00004 Petunia axillaris HOM05D010453 ORTHO05D012004 6.6e-06 54.7 44 54.5
Peaxi162Scf00215g00052 Petunia axillaris HOM05D010453 ORTHO05D012004 6.6e-06 54.7 64 39.1
Peaxi162Scf00218g00812 Petunia axillaris HOM05D010453 ORTHO05D000137 6.6e-06 54.7 46 52.2
Peaxi162Scf00535g00027 Petunia axillaris HOM05D010453 ORTHO05D012004 6.6e-06 54.7 44 54.5
CANSAT80G1051 Cannabis sativa HOM05D008721 ORTHO05D000137 8.6e-06 54.3 45 55.6
Nitab4.5_0003392g0030 Nicotiana tabacum HOM05D008108 ORTHO05D000137 8.6e-06 54.3 48 56.2
Nitab4.5_0024778g0020 Nicotiana tabacum HOM05D002262 ORTHO05D000137 8.6e-06 54.3 31 80.6
Sopen01g014180 Solanum pennellii HOM05D000679 ORTHO05D000137 8.6e-06 54.3 87 32.2
SGA_v2.0_scaffold126G33830 Striga asiatica HOM05D000679 ORTHO05D000137 8.6e-06 54.3 45 57.8
SGA_v2.0_scaffold178G39480 Striga asiatica HOM05D002262 ORTHO05D000137 8.6e-06 54.3 45 57.8
SGA_v2.0_scaffold276G46661 Striga asiatica HOM05D000679 ORTHO05D000137 8.6e-06 54.3 45 57.8
SGA_v2.0_scaffold59G20643 Striga asiatica HOM05D000679 ORTHO05D000137 8.6e-06 54.3 45 57.8


User provided reference genes

Program Settings