Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0002907g0070 Nicotiana tabacum HOM05D009290 ORTHO05D009597 9.2e-102 373.6 198 100.0
Nitab4.5_0022706g0010 Nicotiana tabacum HOM05D009290 ORTHO05D009597 1.9e-70 269.6 229 67.2
Nitab4.5_0007164g0020 Nicotiana tabacum HOM05D009290 ORTHO05D009597 6.7e-60 234.6 205 65.4
Manes.06G115750 Manihot esculenta HOM05D009290 ORTHO05D009597 6.9e-49 198.0 229 46.7
Nitab4.5_0010535g0040 Nicotiana tabacum HOM05D009290 ORTHO05D009597 3.6e-45 185.7 219 53.4
Nitab4.5_0000111g0060 Nicotiana tabacum HOM05D008455 ORTHO05D009597 2.3e-44 183.0 168 61.9
Nitab4.5_0005770g0030 Nicotiana tabacum HOM05D009290 ORTHO05D009597 3.3e-43 179.1 125 68.8
Nitab4.5_0001261g0020 Nicotiana tabacum HOM05D009290 ORTHO05D009597 1.3e-42 177.2 155 64.5
Manes.12G086248 Manihot esculenta HOM05D009290 ORTHO05D009597 1.3e-39 167.2 183 48.6
Nitab4.5_0014285g0010 Nicotiana tabacum HOM05D009290 ORTHO05D009597 1.3e-34 150.6 152 57.2
Nitab4.5_0001078g0120 Nicotiana tabacum HOM05D009290 ORTHO05D009597 1.6e-32 143.7 187 48.7
Manes.08G028050 Manihot esculenta HOM05D009290 ORTHO05D009597 9.4e-30 134.4 132 52.3
Manes.15G180436 Manihot esculenta HOM05D009290 ORTHO05D009597 2.3e-28 129.8 112 53.6
Manes.16G080850 Manihot esculenta HOM05D009290 ORTHO05D009597 2.6e-27 126.3 106 54.7
Nitab4.5_0017029g0010 Nicotiana tabacum HOM05D008455 ORTHO05D009597 3.7e-26 122.5 138 54.3
EL10Ac2g03097 Beta vulgaris HOM05D008455 ORTHO05D009597 2.9e-23 112.8 229 32.3
EL10Ac4g08902 Beta vulgaris HOM05D008455 ORTHO05D009597 5.0e-23 112.1 229 32.3
Nitab4.5_0000030g0320 Nicotiana tabacum HOM05D009290 ORTHO05D009597 3.2e-22 109.4 91 70.3
EL10Ac9g22691 Beta vulgaris HOM05D008455 ORTHO05D009597 7.2e-22 108.2 229 32.3
EL10Ac2g03816 Beta vulgaris HOM05D008455 ORTHO05D009597 1.6e-21 107.1 230 31.7
EL10Ac3g06519 Beta vulgaris HOM05D008455 ORTHO05D009597 1.6e-21 107.1 192 33.3
Manes.07G063157 Manihot esculenta HOM05D009290 ORTHO05D009597 1.4e-20 104.0 82 56.1
EL10Ac2g03454 Beta vulgaris HOM05D008455 ORTHO05D009597 1.8e-20 103.6 222 31.1
Manes.08G084511 Manihot esculenta HOM05D009290 ORTHO05D009597 1.8e-20 103.6 82 56.1
EL10Ac3g06257 Beta vulgaris HOM05D008455 ORTHO05D009597 2.3e-20 103.2 227 31.3
Ah.06g194520 Amaranthus hybridus HOM05D000711 ORTHO05D000545 4.0e-20 102.4 194 34.0
AUR62041429 Chenopodium quinoa HOM05D000107 ORTHO05D000062 5.2e-20 102.1 125 47.2
AUR62037081 Chenopodium quinoa HOM05D008455 ORTHO05D009597 2.0e-19 100.1 198 31.8
Hund15433 Selenicereus undatus HOM05D008455 ORTHO05D009597 3.4e-19 99.4 192 32.3
Manes.06G160267 Manihot esculenta HOM05D009290 ORTHO05D009597 4.4e-19 99.0 82 52.4
AUR62039309 Chenopodium quinoa HOM05D008455 ORTHO05D009597 5.7e-19 98.6 203 31.0
Manes.11G040473 Manihot esculenta HOM05D009290 ORTHO05D009597 1.7e-18 97.1 84 52.4
Manes.18G114301 Manihot esculenta HOM05D009290 ORTHO05D009597 1.7e-18 97.1 82 53.7
EL10Ac3g06529 Beta vulgaris HOM05D008455 ORTHO05D009597 8.3e-18 94.7 183 35.0
Hund08561 Selenicereus undatus HOM05D008455 ORTHO05D009597 1.2e-16 90.9 119 42.0
AUR62031247 Chenopodium quinoa HOM05D008455 ORTHO05D009597 1.6e-16 90.5 201 32.8
AUR62037959 Chenopodium quinoa HOM05D000107 ORTHO05D009597 2.2e-15 86.7 209 29.7
Hund00844 Selenicereus undatus HOM05D008455 ORTHO05D009597 8.5e-15 84.7 182 31.3
AUR62037945 Chenopodium quinoa HOM05D008455 ORTHO05D009597 1.9e-14 83.6 175 31.4
PGR044G2317 Punica granatum HOM05D001309 ORTHO05D000385 4.2e-14 82.4 185 30.3
Hund01459 Selenicereus undatus HOM05D008455 ORTHO05D009597 5.5e-14 82.0 182 30.8
Nitab4.5_0001988g0060 Nicotiana tabacum HOM05D009290 ORTHO05D009597 2.7e-13 79.7 46 87.0
MBI16_g07725_MAGBIO Magnolia biondii HOM05D003534 ORTHO05D000385 3.6e-13 79.3 197 27.9
Ah.01g006000 Amaranthus hybridus HOM05D008455 ORTHO05D009597 6.1e-13 78.6 184 32.6
EL10Ac6g14371 Beta vulgaris HOM05D008455 ORTHO05D009597 6.1e-13 78.6 182 31.9
AUR62039826 Chenopodium quinoa HOM05D008455 ORTHO05D009597 1.8e-12 77.0 171 33.9
EL10As3g23351 Beta vulgaris HOM05D008455 ORTHO05D009597 4.0e-12 75.9 155 31.0
Actinidia00177 Actinidia chinensis HOM05D001309 ORTHO05D000385 6.8e-12 75.1 231 26.0
TAR365G0123 Trochodendron aralioides HOM05D001309 ORTHO05D000385 1.2e-11 74.3 234 24.8
TAR369G0367 Trochodendron aralioides HOM05D001309 ORTHO05D000385 1.2e-11 74.3 234 24.8
TAR622G0651 Trochodendron aralioides HOM05D000141 ORTHO05D000385 1.2e-11 74.3 234 24.8
AUR62037410 Chenopodium quinoa HOM05D008455 ORTHO05D009597 1.5e-11 73.9 230 27.8
AUR62033711 Chenopodium quinoa HOM05D008455 ORTHO05D009597 2.0e-11 73.6 230 27.8
Gohir.D01G174600 Gossypium hirsutum HOM05D001309 ORTHO05D000385 4.4e-11 72.4 194 29.4
Nn2g11546 Nelumbo nucifera HOM05D001309 ORTHO05D000385 4.4e-11 72.4 202 26.7
TAR365G0008 Trochodendron aralioides HOM05D001163 ORTHO05D001769 4.4e-11 72.4 221 25.3
Gohir.A01G183600 Gossypium hirsutum HOM05D001309 ORTHO05D005970 7.5e-11 71.6 194 29.4
Gorai.002G216700 Gossypium raimondii HOM05D001309 ORTHO05D000385 7.5e-11 71.6 194 29.4
MBI15_g36793_MAGBIO Magnolia biondii HOM05D001309 ORTHO05D000385 9.8e-11 71.2 188 28.2
MBI09_g33431_MAGBIO Magnolia biondii HOM05D001309 ORTHO05D000385 3.7e-10 69.3 232 25.9
Nitab4.5_0000737g0090 Nicotiana tabacum HOM05D009290 ORTHO05D009597 3.7e-10 69.3 35 94.3
MBI19_g12820_MAGBIO Magnolia biondii HOM05D001309 ORTHO05D000385 4.9e-10 68.9 177 29.4
Nn1g01837 Nelumbo nucifera HOM05D006525 ORTHO05D007845 4.9e-10 68.9 190 26.8
arahy.Tifrunner.gnm1.ann1.HKAM97 Arachis hypogaea HOM05D010482 ORTHO05D000385 8.3e-10 68.2 196 29.1
CAN.G215.7 Capsicum annuum HOM05D009290 ORTHO05D013052 1.1e-09 67.8 44 70.5
TAR374G1143 Trochodendron aralioides HOM05D001309 ORTHO05D000385 3.1e-09 66.2 180 27.8
Solyc04g005730.3 Solanum lycopersicum HOM05D003888 ORTHO05D007163 4.1e-09 65.9 191 25.7
Lsat_1_v5_gn_9_120520 Lactuca sativa HOM05D001309 ORTHO05D005970 5.4e-09 65.5 194 28.4
MBI13_g26301_MAGBIO Magnolia biondii HOM05D001309 ORTHO05D000385 5.4e-09 65.5 132 31.8
TWI75G0500 Tripterygium wilfordii HOM05D001309 ORTHO05D000385 9.2e-09 64.7 175 27.4
MBI05_g40697_MAGBIO Magnolia biondii HOM05D001309 ORTHO05D000385 1.6e-08 63.9 132 29.5
MBI14_g07746_MAGBIO Magnolia biondii HOM05D001309 ORTHO05D000385 2.7e-08 63.2 193 25.9
Nn1g09472 Nelumbo nucifera HOM05D001309 ORTHO05D000385 2.7e-08 63.2 119 31.9
TAR369G0469 Trochodendron aralioides HOM05D001309 ORTHO05D000385 2.7e-08 63.2 156 26.9
TAR633G0853 Trochodendron aralioides HOM05D001163 ORTHO05D001769 2.7e-08 63.2 187 24.6
TAR624G0746 Trochodendron aralioides HOM05D001309 ORTHO05D000385 3.5e-08 62.8 130 27.7
CSS0007321 Camellia sinensis var. sinensis HOM05D001309 ORTHO05D000385 4.5e-08 62.4 195 25.1
CSS0017872 Camellia sinensis var. sinensis HOM05D001309 ORTHO05D000385 4.5e-08 62.4 195 25.1
ECA232G4413 Erigeron canadensis HOM05D000107 ORTHO05D000062 4.5e-08 62.4 194 26.3
MBI14_g03116_MAGBIO Magnolia biondii HOM05D001309 ORTHO05D000385 5.9e-08 62.0 198 26.3
CSS0000023 Camellia sinensis var. sinensis HOM05D001309 ORTHO05D000385 7.7e-08 61.6 187 24.6
CSS0011333 Camellia sinensis var. sinensis HOM05D001309 ORTHO05D000385 7.7e-08 61.6 197 25.4
TAR629G3448 Trochodendron aralioides HOM05D001163 ORTHO05D001769 7.7e-08 61.6 130 27.7
MBI09_g15192_MAGBIO Magnolia biondii HOM05D001309 ORTHO05D000385 1.0e-07 61.2 163 27.6
MBI19_g00149_MAGBIO Magnolia biondii HOM05D001309 ORTHO05D000385 2.3e-07 60.1 123 28.5
ECA240G1654 Erigeron canadensis HOM05D005763 ORTHO05D005970 2.9e-07 59.7 194 27.8
Manes.11G024650 Manihot esculenta HOM05D008455 ORTHO05D009597 2.9e-07 59.7 95 42.1
Manes.17G118642 Manihot esculenta HOM05D008455 ORTHO05D009597 2.9e-07 59.7 95 42.1
Manes.17G119328 Manihot esculenta HOM05D008455 ORTHO05D009597 2.9e-07 59.7 95 42.1
TAR362G1088 Trochodendron aralioides HOM05D001309 ORTHO05D000385 2.9e-07 59.7 196 26.5
CSS0004946 Camellia sinensis var. sinensis HOM05D001309 ORTHO05D000385 5.0e-07 58.9 197 23.9
CSS0011055 Camellia sinensis var. sinensis HOM05D001309 ORTHO05D000385 5.0e-07 58.9 197 23.9
CSS0024690 Camellia sinensis var. sinensis HOM05D001309 ORTHO05D000385 5.0e-07 58.9 197 23.9
AUR62032009 Chenopodium quinoa HOM05D008455 ORTHO05D009597 5.0e-07 58.9 92 37.0
ECA164G0002 Erigeron canadensis HOM05D008488 ORTHO05D000385 5.0e-07 58.9 170 26.5
Nn1g00481 Nelumbo nucifera HOM05D001309 ORTHO05D000385 6.6e-07 58.5 95 38.9
ECA233G0549 Erigeron canadensis HOM05D008488 ORTHO05D000385 8.6e-07 58.2 151 27.8
PSO478G4356 Papaver somniferum HOM05D010375 ORTHO05D015177 8.6e-07 58.2 129 28.7
arahy.Tifrunner.gnm1.ann1.CXU7YK Arachis hypogaea HOM05D010482 ORTHO05D000385 1.1e-06 57.8 176 29.0
arahy.Tifrunner.gnm1.ann1.5MEJ54 Arachis hypogaea HOM05D010482 ORTHO05D000385 1.5e-06 57.4 167 29.3
AUR62040758 Chenopodium quinoa HOM05D006468 ORTHO05D006908 1.9e-06 57.0 164 28.0
CSS0042181 Camellia sinensis var. sinensis HOM05D001309 ORTHO05D000385 2.5e-06 56.6 197 23.4
COL.COLO4_17726 Corchorus olitorius HOM05D001309 ORTHO05D005970 3.3e-06 56.2 131 29.0
MBI19_g33997_MAGBIO Magnolia biondii HOM05D001309 ORTHO05D000385 4.3e-06 55.8 127 26.0
MD09G1027200 Malus domestica HOM05D005763 ORTHO05D005970 4.3e-06 55.8 196 27.0
Hund04004 Selenicereus undatus HOM05D008455 ORTHO05D009597 4.3e-06 55.8 98 38.8
PSO063G4994 Papaver somniferum HOM05D010375 ORTHO05D000233 5.6e-06 55.5 118 30.5
PSO675G2505 Papaver somniferum HOM05D010375 ORTHO05D000233 5.6e-06 55.5 118 30.5
PSO700G0133 Papaver somniferum HOM05D010375 ORTHO05D015177 5.6e-06 55.5 118 30.5
PSO717G0128 Papaver somniferum HOM05D010375 ORTHO05D015177 5.6e-06 55.5 118 30.5
PSO724G0607 Papaver somniferum HOM05D010375 ORTHO05D000233 5.6e-06 55.5 118 30.5
PGSC0003DMG400039419 Solanum tuberosum HOM05D007930 ORTHO05D007166 5.6e-06 55.5 124 29.0
MELO3C032241.2 Cucumis melo HOM05D000539 ORTHO05D000233 7.3e-06 55.1 115 30.4
PSO478G2523 Papaver somniferum HOM05D010375 ORTHO05D000233 7.3e-06 55.1 118 30.5
Sopen11g014670 Solanum pennellii HOM05D003888 ORTHO05D007163 7.3e-06 55.1 121 32.2
MBI01_g25649_MAGBIO Magnolia biondii HOM05D001309 ORTHO05D000385 9.5e-06 54.7 180 26.1
PSO724G0047 Papaver somniferum HOM05D010375 ORTHO05D000233 9.5e-06 54.7 118 29.7
vmacro21926 Vaccinium macrocarpon HOM05D008488 ORTHO05D000385 9.5e-06 54.7 119 32.8
vmacro23420 Vaccinium macrocarpon HOM05D008488 ORTHO05D000385 9.5e-06 54.7 119 32.8


User provided reference genes

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