Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0002902g0150 Nicotiana tabacum HOM05D000891 ORTHO05D000761 1.3e-94 350.1 232 100.0
CAN.G874.55 Capsicum annuum HOM05D000891 ORTHO05D000761 8.7e-27 124.8 200 43.5
Nitab4.5_0000105g0430 Nicotiana tabacum HOM05D000891 ORTHO05D000761 2.0e-23 113.6 161 44.1
CAN.G424.88 Capsicum annuum HOM05D000891 ORTHO05D000761 2.5e-21 106.7 172 42.4
Nitab4.5_0003045g0010 Nicotiana tabacum HOM05D000891 ORTHO05D000761 1.6e-20 104.0 165 43.0
Peaxi162Scf00390g00015 Petunia axillaris HOM05D000891 ORTHO05D000761 6.7e-19 98.6 199 38.7
Solyc02g079820.4 Solanum lycopersicum HOM05D000891 ORTHO05D000761 4.3e-18 95.9 196 37.8
PGSC0003DMG400021711 Solanum tuberosum HOM05D000891 ORTHO05D000761 4.8e-17 92.4 195 37.9
CDE05G0057 Ceratophyllum demersum HOM05D000891 ORTHO05D000761 1.1e-13 81.3 127 37.0
Actinidia05549 Actinidia chinensis HOM05D000891 ORTHO05D000761 1.9e-13 80.5 194 34.0
Cc02_g11880 Coffea canephora HOM05D000891 ORTHO05D000761 6.1e-12 75.5 143 34.3
Aqoxy4G01892 Aquilegia oxysepala HOM05D000891 ORTHO05D000761 1.8e-11 73.9 227 30.4
CAN.G424.89 Capsicum annuum HOM05D000891 ORTHO05D000761 3.0e-11 73.2 205 32.7
Thecc.06G206500 Theobroma cacao HOM05D000891 ORTHO05D000761 8.8e-11 71.6 163 32.5
ECA236G1633 Erigeron canadensis HOM05D000891 ORTHO05D000761 1.5e-10 70.9 222 28.8
Lj6g0017835 Lotus japonicus HOM05D000891 ORTHO05D000761 2.0e-10 70.5 228 26.3
MELO3C007342.2 Cucumis melo HOM05D000891 ORTHO05D000761 2.6e-10 70.1 244 26.2
vmacro03743 Vaccinium macrocarpon HOM05D000891 ORTHO05D000761 2.6e-10 70.1 175 31.4
Oeu038199.2 Olea europaea HOM05D000891 ORTHO05D000761 3.3e-10 69.7 170 31.8
Cc02_g11890 Coffea canephora HOM05D000891 ORTHO05D000761 4.4e-10 69.3 170 30.6
Duzib235G1047 Durio zibethinus HOM05D000891 ORTHO05D000761 4.4e-10 69.3 162 33.3
Gorai.011G019800 Gossypium raimondii HOM05D000891 ORTHO05D000761 4.4e-10 69.3 164 32.9
Nitab4.5_0000425g0250 Nicotiana tabacum HOM05D000891 ORTHO05D000761 4.4e-10 69.3 51 64.7
Aqoxy4G01893 Aquilegia oxysepala HOM05D000891 ORTHO05D000761 5.7e-10 68.9 122 37.7
Gohir.D10G017800 Gossypium hirsutum HOM05D000891 ORTHO05D000761 9.7e-10 68.2 164 32.3
MELO3C007346.2 Cucumis melo HOM05D000891 ORTHO05D000761 1.3e-09 67.8 204 27.0
Haze_06658 Corylus avellana HOM05D000891 ORTHO05D000761 2.8e-09 66.6 160 32.5
Lsat_1_v5_gn_4_58301 Lactuca sativa HOM05D000891 ORTHO05D000761 3.7e-09 66.2 207 28.0
Nitab4.5_0001586g0050 Nicotiana tabacum HOM05D000891 ORTHO05D000761 3.7e-09 66.2 132 31.8
QL05p077799 Quercus lobata HOM05D000891 ORTHO05D000761 4.8e-09 65.9 169 31.4
Cfa000283 Carpinus fangiana HOM05D000891 ORTHO05D000761 6.3e-09 65.5 165 33.3
FAN21G3318 Fragaria x ananassa HOM05D000891 ORTHO05D000761 6.3e-09 65.5 53 54.7
FvH4_3g03160 Fragaria vesca HOM05D000891 ORTHO05D000761 8.2e-09 65.1 115 35.7
PGSC0003DMG400005048 Solanum tuberosum HOM05D000891 ORTHO05D000761 1.1e-08 64.7 124 34.7
TWI38G1234 Tripterygium wilfordii HOM05D000891 ORTHO05D000761 1.1e-08 64.7 136 32.4
Dinv18956 Davidia involucrata HOM05D000891 ORTHO05D000761 1.4e-08 64.3 154 33.1
Solyc02g079830.1 Solanum lycopersicum HOM05D000891 ORTHO05D000761 1.4e-08 64.3 200 31.0
Nitab4.5_0001586g0030 Nicotiana tabacum HOM05D000891 ORTHO05D000761 1.8e-08 63.9 132 31.1
Nitab4.5_0002544g0080 Nicotiana tabacum HOM05D000891 ORTHO05D000761 3.1e-08 63.2 132 31.1
Peaxi162Scf00180g00114 Petunia axillaris HOM05D000891 ORTHO05D000761 3.1e-08 63.2 160 28.8
Sabra04G0017000 Salix brachista HOM05D000891 ORTHO05D000761 4.1e-08 62.8 164 32.9
SalBow5G3563 Salvia bowleyana HOM05D000891 ORTHO05D000761 4.1e-08 62.8 158 31.6
Solyc03g031460.1 Solanum lycopersicum HOM05D000891 ORTHO05D000761 4.1e-08 62.8 163 31.3
EL10As6g23660 Beta vulgaris HOM05D000022 ORTHO05D000071 5.3e-08 62.4 123 33.3
CsaV3_6G049490 Cucumis sativus L. HOM05D000891 ORTHO05D000761 5.3e-08 62.4 242 27.3
Prupe.4G030500 Prunus persica HOM05D000891 ORTHO05D000761 5.3e-08 62.4 123 32.5
Sopen02g024600 Solanum pennellii HOM05D000891 ORTHO05D000761 7.0e-08 62.0 199 31.2
FAN25G2188 Fragaria x ananassa HOM05D000891 ORTHO05D000761 9.1e-08 61.6 153 30.7
Gohir.A10G017600 Gossypium hirsutum HOM05D000891 ORTHO05D000761 9.1e-08 61.6 164 30.5
CDE04G0575 Ceratophyllum demersum HOM05D000891 ORTHO05D000761 1.2e-07 61.2 180 27.2
CDE05G2408 Ceratophyllum demersum HOM05D000891 ORTHO05D000761 1.2e-07 61.2 135 31.1
CDE12G0214 Ceratophyllum demersum HOM05D000891 ORTHO05D000761 1.2e-07 61.2 166 27.7
Nitab4.5_0002544g0030 Nicotiana tabacum HOM05D000891 ORTHO05D000761 1.2e-07 61.2 132 31.1
Sopen03g005350 Solanum pennellii HOM05D000891 ORTHO05D000761 1.2e-07 61.2 163 30.7
SGA_v2.0_scaffold382G50400 Striga asiatica HOM05D000891 ORTHO05D000761 1.2e-07 61.2 144 30.6
VMungo0251G1977 Vigna mungo HOM05D000891 ORTHO05D000761 1.2e-07 61.2 123 31.7
CDE05G3353 Ceratophyllum demersum HOM05D000891 ORTHO05D000761 1.5e-07 60.8 121 34.7
ClCG01G022320 Citrullus lanatus HOM05D000891 ORTHO05D000761 1.5e-07 60.8 185 29.7
Aqoxy4G01894 Aquilegia oxysepala HOM05D000891 ORTHO05D000761 2.0e-07 60.5 147 33.3
Carub.0003s1250 Capsella rubella HOM05D000891 ORTHO05D000761 2.0e-07 60.5 164 31.7
PGSC0003DMG400021712 Solanum tuberosum HOM05D000891 ORTHO05D000761 2.0e-07 60.5 200 29.5
TAR627G1176 Trochodendron aralioides HOM05D000891 ORTHO05D000761 2.0e-07 60.5 125 31.2
Sabra11G0019500 Salix brachista HOM05D000891 ORTHO05D000761 2.6e-07 60.1 142 32.4
Sabra11G0025400 Salix brachista HOM05D000891 ORTHO05D000761 2.6e-07 60.1 142 32.4
Ciclev10015628m.g Citrus clementina HOM05D000891 ORTHO05D000761 3.4e-07 59.7 123 32.5
Lalb_Chr15g0087451 Lupinus albus HOM05D000891 ORTHO05D000761 3.4e-07 59.7 171 22.8
Atru.chr10.2083 Acer truncatum HOM05D000891 ORTHO05D000761 4.5e-07 59.3 123 28.5
CiPaw.01G035200 Carya illinoinensis HOM05D000891 ORTHO05D000761 4.5e-07 59.3 162 27.8
CiPaw.10G113500 Carya illinoinensis HOM05D000891 ORTHO05D000761 4.5e-07 59.3 153 30.1
BolC3t16891H Brassica oleracea HOM05D000891 ORTHO05D000761 5.9e-07 58.9 158 29.7
CDE02G1592 Ceratophyllum demersum HOM05D000891 ORTHO05D000761 5.9e-07 58.9 130 30.8
MD05G1334700 Malus domestica HOM05D000891 ORTHO05D000761 5.9e-07 58.9 162 29.6
Potri.011G032312 Populus trichocarpa HOM05D000891 ORTHO05D000761 5.9e-07 58.9 123 34.1
Rhsim13G0163100 Rhododendron simsii HOM05D000891 ORTHO05D000761 5.9e-07 58.9 127 33.9
CANSAT56G0926 Cannabis sativa HOM05D000891 ORTHO05D000761 7.7e-07 58.5 160 28.8
Peaxi162Scf00931g00051 Petunia axillaris HOM05D000891 ORTHO05D000761 7.7e-07 58.5 150 34.0
TAR626G0825 Trochodendron aralioides HOM05D000891 ORTHO05D000761 7.7e-07 58.5 214 24.8
GSVIVG01005273001 Vitis vinifera HOM05D000891 ORTHO05D000761 1.0e-06 58.2 123 31.7
BcaC01g04016 Brassica carinata HOM05D000891 ORTHO05D000761 1.3e-06 57.8 158 29.1
C03p46200 Brassica napus HOM05D000891 ORTHO05D000761 1.3e-06 57.8 158 29.1
Lj2P276T41 Lonicera japonica HOM05D000891 ORTHO05D000761 1.3e-06 57.8 130 31.5
Sc03g0001890 Simmondsia chinensis HOM05D000891 ORTHO05D000761 1.3e-06 57.8 117 32.5
PGSC0003DMG400027677 Solanum tuberosum HOM05D000891 ORTHO05D397192 1.3e-06 57.8 34 82.4
CiPaw.16G021100 Carya illinoinensis HOM05D000891 ORTHO05D000761 1.7e-06 57.4 125 32.8
AUR62014639 Chenopodium quinoa HOM05D000891 ORTHO05D000761 1.7e-06 57.4 123 31.7
Manes.17G030600 Manihot esculenta HOM05D000891 ORTHO05D000761 1.7e-06 57.4 158 31.0
Phvul.002G219400 Phaseolus vulgaris HOM05D000891 ORTHO05D000761 1.7e-06 57.4 125 29.6
Potri.004G030000 Populus trichocarpa HOM05D000891 ORTHO05D000761 1.7e-06 57.4 162 29.0
RcHm_v2.0_Chr5g0004781 Rosa chinensis HOM05D000891 ORTHO05D000761 1.7e-06 57.4 143 29.4
CARHR109130 Cardamine hirsuta HOM05D000891 ORTHO05D000761 2.2e-06 57.0 153 29.4
AUR62012561 Chenopodium quinoa HOM05D000891 ORTHO05D000761 2.2e-06 57.0 53 45.3
DCAR_004172 Daucus carota HOM05D000891 ORTHO05D000761 2.2e-06 57.0 153 32.0
Gohir.A06G186500 Gossypium hirsutum HOM05D000891 ORTHO05D000761 2.2e-06 57.0 225 24.0
MBI06_g44586_MAGBIO Magnolia biondii HOM05D000891 ORTHO05D000761 2.2e-06 57.0 58 46.6
Sc17g0006880 Simmondsia chinensis HOM05D000891 ORTHO05D000761 2.2e-06 57.0 171 29.8
AT3G13160 Arabidopsis thaliana HOM05D000891 ORTHO05D000761 2.9e-06 56.6 164 29.9
A02p23790 Brassica napus HOM05D000891 ORTHO05D000761 2.9e-06 56.6 232 25.0
Nitab4.5_0000900g0170 Nicotiana tabacum HOM05D000891 ORTHO05D000761 2.9e-06 56.6 145 32.4
Potri.003G062700 Populus trichocarpa HOM05D000891 ORTHO05D000761 2.9e-06 56.6 57 43.9
Potri.011G032400 Populus trichocarpa HOM05D000891 ORTHO05D000761 2.9e-06 56.6 163 32.5
Sed0011714 Sechium edule HOM05D000891 ORTHO05D000761 2.9e-06 56.6 189 25.4
VMungo0251G3555 Vigna mungo HOM05D000891 ORTHO05D000761 2.9e-06 56.6 123 29.3
AL3G24900 Arabidopsis lyrata HOM05D000891 ORTHO05D000761 3.8e-06 56.2 164 29.3
BolC9t54304H Brassica oleracea HOM05D000891 ORTHO05D000761 3.8e-06 56.2 130 30.0
CSS0031339 Camellia sinensis var. sinensis HOM05D000891 ORTHO05D000761 3.8e-06 56.2 123 32.5
Gohir.D06G125900 Gossypium hirsutum HOM05D000891 ORTHO05D000761 3.8e-06 56.2 129 28.7
Manes.16G016000 Manihot esculenta HOM05D000891 ORTHO05D000761 3.8e-06 56.2 139 30.9
Psat7g107640 Pisum sativum HOM05D000891 ORTHO05D000761 3.8e-06 56.2 152 28.9
TPR.G13909 Trifolium pratense HOM05D000891 ORTHO05D000761 3.8e-06 56.2 125 31.2
AL1G64030 Arabidopsis lyrata HOM05D000891 ORTHO05D000761 5.0e-06 55.8 150 28.7
arahy.Tifrunner.gnm1.ann1.PL0MZ0 Arachis hypogaea HOM05D000687 ORTHO05D000761 5.0e-06 55.8 155 29.0
BraA02t07370Z Brassica rapa HOM05D000891 ORTHO05D000761 5.0e-06 55.8 232 25.0
COL.COLO4_31672 Corchorus olitorius HOM05D000891 ORTHO05D000761 5.0e-06 55.8 101 32.7
Migut.I00564 Erythranthe guttata HOM05D000891 ORTHO05D000761 5.0e-06 55.8 161 26.1
Glyma.07G187800 Glycine max HOM05D000891 ORTHO05D000761 5.0e-06 55.8 123 29.3
Lalb_Chr09g0327201 Lupinus albus HOM05D000891 ORTHO05D000761 5.0e-06 55.8 195 28.2
MBI01_g37800_MAGBIO Magnolia biondii HOM05D000891 ORTHO05D000761 5.0e-06 55.8 204 25.0
PGR042G0713 Punica granatum HOM05D000891 ORTHO05D000761 5.0e-06 55.8 123 33.3
QL05p077802 Quercus lobata HOM05D000891 ORTHO05D000761 5.0e-06 55.8 162 30.2
arahy.Tifrunner.gnm1.ann1.2DT13A Arachis hypogaea HOM05D000891 ORTHO05D000761 6.5e-06 55.5 155 29.0
C06p16280 Brassica napus HOM05D000891 ORTHO05D000761 6.5e-06 55.5 160 28.1
BolC6t36828H Brassica oleracea HOM05D000891 ORTHO05D000761 6.5e-06 55.5 160 28.1
Ca_18462_v3 Cicer arietinum L. HOM05D000891 ORTHO05D000761 6.5e-06 55.5 149 30.2
Ca_29634_v3 Cicer arietinum L. HOM05D000891 ORTHO05D000761 6.5e-06 55.5 149 30.2
HanXRQChr05g0130841 Helianthus annuus HOM05D000891 ORTHO05D000761 6.5e-06 55.5 123 29.3
QL06p045511 Quercus lobata HOM05D000891 ORTHO05D000761 6.5e-06 55.5 136 28.7
Sed0024534 Sechium edule HOM05D000891 ORTHO05D000761 6.5e-06 55.5 169 29.0
BcaB02g10792 Brassica carinata HOM05D000891 ORTHO05D000761 8.5e-06 55.1 161 28.0
BcaC08g44226 Brassica carinata HOM05D000891 ORTHO05D000761 8.5e-06 55.1 160 28.1
A03p38070 Brassica napus HOM05D000891 ORTHO05D000761 8.5e-06 55.1 174 28.2
BraA03t12960Z Brassica rapa HOM05D000891 ORTHO05D000761 8.5e-06 55.1 174 28.2
Carub.0001s4448 Capsella rubella HOM05D000891 ORTHO05D000761 8.5e-06 55.1 170 26.5
Cfa000291 Carpinus fangiana HOM05D000891 ORTHO05D000761 8.5e-06 55.1 45 55.6


User provided reference genes

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