Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0002892g0020 Nicotiana tabacum HOM05D007556 ORTHO05D002252 1.2e-67 260.0 141 100.0
Nitab4.5_0002102g0030 Nicotiana tabacum HOM05D007556 ORTHO05D002252 4.1e-44 181.8 120 85.8
Nitab4.5_0000959g0110 Nicotiana tabacum HOM05D007556 ORTHO05D002252 8.5e-42 174.1 120 73.3
Nitab4.5_0002168g0010 Nicotiana tabacum HOM05D007556 ORTHO05D002252 1.4e-39 166.8 98 80.6
Nitab4.5_0000618g0010 Nicotiana tabacum HOM05D007556 ORTHO05D002252 5.2e-39 164.9 116 82.8
Nitab4.5_0002053g0110 Nicotiana tabacum HOM05D000024 ORTHO05D000007 5.2e-39 164.9 107 88.8
Nitab4.5_0010789g0020 Nicotiana tabacum HOM05D007556 ORTHO05D002252 4.1e-36 155.2 121 76.9
Nitab4.5_0000295g0010 Nicotiana tabacum HOM05D007556 ORTHO05D002252 5.0e-34 148.3 104 84.6
Nitab4.5_0002168g0020 Nicotiana tabacum HOM05D007556 ORTHO05D002252 5.6e-33 144.8 98 73.5
Nitab4.5_0000959g0100 Nicotiana tabacum HOM05D007556 ORTHO05D002252 5.4e-28 128.3 77 80.5
Peaxi162Scf00684g00413 Petunia axillaris HOM05D007556 ORTHO05D002252 2.3e-26 122.9 94 66.0
Nitab4.5_0007420g0020 Nicotiana tabacum HOM05D007556 ORTHO05D002252 1.0e-23 114.0 78 89.7
Peaxi162Scf00152g00130 Petunia axillaris HOM05D007556 ORTHO05D002252 6.4e-21 104.8 95 61.1
CAN.G132.5 Capsicum annuum HOM05D007556 ORTHO05D002252 6.6e-18 94.7 92 59.8
Solyc10g009150.3 Solanum lycopersicum HOM05D007556 ORTHO05D002252 1.9e-17 93.2 90 61.1
Sopen10g004930 Solanum pennellii HOM05D007556 ORTHO05D002252 9.5e-17 90.9 90 60.0
PGSC0003DMG400020028 Solanum tuberosum HOM05D007556 ORTHO05D002252 1.2e-14 84.0 90 51.1
TAR628G1474 Trochodendron aralioides HOM05D007556 ORTHO05D002252 2.6e-14 82.8 101 44.6
Solyc07g016215.1 Solanum lycopersicum HOM05D007556 ORTHO05D002252 3.4e-14 82.4 92 48.9
TAR628G0569 Trochodendron aralioides HOM05D007556 ORTHO05D002252 7.5e-14 81.3 101 43.6
PGSC0003DMG400009559 Solanum tuberosum HOM05D007556 ORTHO05D002252 1.3e-13 80.5 90 50.0
Rhsim11G0175400 Rhododendron simsii HOM05D007556 ORTHO05D002252 1.7e-13 80.1 98 46.9
Rhsim11G0175600 Rhododendron simsii HOM05D007556 ORTHO05D002252 3.7e-13 79.0 94 47.9
PGSC0003DMG400009558 Solanum tuberosum HOM05D007556 ORTHO05D002252 8.3e-13 77.8 84 50.0
Thecc.02G086700 Theobroma cacao HOM05D007556 ORTHO05D002252 8.3e-13 77.8 122 40.2
Actinidia00509 Actinidia chinensis HOM05D007556 ORTHO05D002252 3.2e-12 75.9 88 45.5
PGSC0003DMG400010828 Solanum tuberosum HOM05D007556 ORTHO05D002252 3.2e-12 75.9 73 56.2
Manes.07G098400 Manihot esculenta HOM05D007556 ORTHO05D002252 4.1e-12 75.5 89 46.1
Prupe.8G099600 Prunus persica HOM05D007556 ORTHO05D002252 4.1e-12 75.5 105 39.0
Rhsim11G0175100 Rhododendron simsii HOM05D007556 ORTHO05D002252 7.1e-12 74.7 94 43.6
Prupe.8G098800 Prunus persica HOM05D007556 ORTHO05D002252 9.2e-12 74.3 96 39.6
TWI79G0288 Tripterygium wilfordii HOM05D007556 ORTHO05D002252 9.2e-12 74.3 108 42.6
Gorai.012G152300 Gossypium raimondii HOM05D007556 ORTHO05D002252 1.2e-11 73.9 107 41.1
Dinv23538 Davidia involucrata HOM05D007556 ORTHO05D002252 4.6e-11 72.0 97 44.3
Gohir.A04G122100 Gossypium hirsutum HOM05D007556 ORTHO05D002252 6.0e-11 71.6 98 42.9
vmacro17186 Vaccinium macrocarpon HOM05D007556 ORTHO05D002252 6.0e-11 71.6 106 42.5
Cfa005016 Carpinus fangiana HOM05D007556 ORTHO05D002252 1.3e-10 70.5 102 43.1
DCAR_022107 Daucus carota HOM05D007556 ORTHO05D002252 1.3e-10 70.5 91 46.2
Gohir.D04G164160 Gossypium hirsutum HOM05D007556 ORTHO05D002252 1.3e-10 70.5 100 46.0
Cc05_g01670 Coffea canephora HOM05D007556 ORTHO05D002252 1.7e-10 70.1 98 45.9
Hma1.2p1_0066F.1_g036560 Hydrangea macrophylla HOM05D007556 ORTHO05D002252 2.3e-10 69.7 91 44.0
QL11p043321 Quercus lobata HOM05D007556 ORTHO05D002252 3.0e-10 69.3 100 40.0
GSVIVG01031948001 Vitis vinifera HOM05D007556 ORTHO05D002252 5.1e-10 68.6 110 35.5
Cfa005014 Carpinus fangiana HOM05D007556 ORTHO05D002252 6.6e-10 68.2 102 42.2
vmacro02121 Vaccinium macrocarpon HOM05D007556 ORTHO05D002252 6.6e-10 68.2 106 39.6
CSS0014637 Camellia sinensis var. sinensis HOM05D007556 ORTHO05D002252 1.1e-09 67.4 97 45.4
Duzib132G0033 Durio zibethinus HOM05D007556 ORTHO05D002252 1.5e-09 67.0 153 41.2
Potri.009G114701 Populus trichocarpa HOM05D007556 ORTHO05D002252 2.5e-09 66.2 104 40.4
GSVIVG01031943001 Vitis vinifera HOM05D007556 ORTHO05D002252 2.5e-09 66.2 95 40.0
Prupe.8G098600 Prunus persica HOM05D007556 ORTHO05D002252 3.3e-09 65.9 89 38.2
Manes.07G098500 Manihot esculenta HOM05D007556 ORTHO05D002252 4.3e-09 65.5 92 43.5
Rhsim11G0175800 Rhododendron simsii HOM05D007556 ORTHO05D002252 4.3e-09 65.5 98 42.9
Potri.009G114800 Populus trichocarpa HOM05D007556 ORTHO05D002252 7.3e-09 64.7 91 40.7
Prupe.8G099400 Prunus persica HOM05D007556 ORTHO05D002252 7.3e-09 64.7 92 35.9
Manes.07G098300 Manihot esculenta HOM05D007556 ORTHO05D002252 1.2e-08 63.9 83 48.2
SGA_v2.0_scaffold55G19792 Striga asiatica HOM05D007556 ORTHO05D002252 2.8e-08 62.8 88 38.6
Oeu014344.1 Olea europaea HOM05D007556 ORTHO05D002252 3.6e-08 62.4 85 42.4
vmacro02123 Vaccinium macrocarpon HOM05D007556 ORTHO05D002252 3.6e-08 62.4 92 40.2
Manes.10G047933 Manihot esculenta HOM05D007556 ORTHO05D002252 4.7e-08 62.0 89 40.4
TPR.G38150 Trifolium pratense HOM05D010359 ORTHO05D002252 4.7e-08 62.0 91 37.4
Cc02_g17690 Coffea canephora HOM05D007556 ORTHO05D002252 6.2e-08 61.6 106 37.7
Peaxi162Scf00684g00049 Petunia axillaris HOM05D007556 ORTHO05D002252 6.2e-08 61.6 59 61.0
COL.COLO4_25915 Corchorus olitorius HOM05D007556 ORTHO05D002252 1.1e-07 60.8 103 38.8
Sc18g0004580 Simmondsia chinensis HOM05D007556 ORTHO05D002252 1.4e-07 60.5 77 41.6
Psat5g006520 Pisum sativum HOM05D010359 ORTHO05D002252 4.0e-07 58.9 85 40.0
Aqoxy5G01668 Aquilegia oxysepala HOM05D007556 ORTHO05D002252 5.2e-07 58.5 93 39.8
Dinv42073 Davidia involucrata HOM05D007227 ORTHO05D002252 5.2e-07 58.5 94 37.2
CANSAT56G4301 Cannabis sativa HOM05D007556 ORTHO05D002252 6.8e-07 58.2 104 39.4
Dinv23539 Davidia involucrata HOM05D007227 ORTHO05D002252 6.8e-07 58.2 78 41.0
Actinidia00511 Actinidia chinensis HOM05D007227 ORTHO05D002252 8.9e-07 57.8 80 42.5
CiPaw.05G063200 Carya illinoinensis HOM05D007227 ORTHO05D002252 8.9e-07 57.8 88 38.6
Aqoxy5G01653 Aquilegia oxysepala HOM05D007556 ORTHO05D002252 1.2e-06 57.4 104 36.5
CSS0039349 Camellia sinensis var. sinensis HOM05D007556 ORTHO05D002252 1.2e-06 57.4 71 43.7
AUR62011343 Chenopodium quinoa HOM05D013587 ORTHO05D002252 1.2e-06 57.4 82 40.2
AUR62011345 Chenopodium quinoa HOM05D013587 ORTHO05D002252 1.2e-06 57.4 82 40.2
Peaxi162Scf00684g00330 Petunia axillaris HOM05D058148 ORTHO05D306638 1.2e-06 57.4 87 47.1
PGR042G1382 Punica granatum HOM05D007556 ORTHO05D002252 1.2e-06 57.4 110 38.2
Sed0019925 Sechium edule HOM05D007227 ORTHO05D002252 1.2e-06 57.4 88 33.0
GSVIVG01031946001 Vitis vinifera HOM05D007556 ORTHO05D002252 1.5e-06 57.0 105 37.1
CiPaw.06G136300 Carya illinoinensis HOM05D007556 ORTHO05D002252 2.0e-06 56.6 105 36.2
Eucgr.G00440 Eucalyptus grandis HOM05D040694 ORTHO05D002252 2.0e-06 56.6 96 34.4
PGR142G1531 Punica granatum HOM05D007227 ORTHO05D002252 2.0e-06 56.6 93 41.9
VMungo1127G0650 Vigna mungo HOM05D007556 ORTHO05D002252 2.0e-06 56.6 75 40.0
AUR62016715 Chenopodium quinoa HOM05D013587 ORTHO05D002252 2.6e-06 56.2 93 36.6
COL.COLO4_37463 Corchorus olitorius HOM05D007556 ORTHO05D002252 2.6e-06 56.2 113 35.4
Lj3g0003579 Lotus japonicus HOM05D010359 ORTHO05D002252 2.6e-06 56.2 88 35.2
CiPaw.06G136500 Carya illinoinensis HOM05D007556 ORTHO05D002252 3.4e-06 55.8 104 37.5
Atru.chr5.2995 Acer truncatum HOM05D007556 ORTHO05D002252 4.4e-06 55.5 111 33.3
Eucgr.I01259 Eucalyptus grandis HOM05D007227 ORTHO05D002252 4.4e-06 55.5 89 36.0
TPR.G38124 Trifolium pratense HOM05D007227 ORTHO05D002252 4.4e-06 55.5 82 39.0
Lj3g0013453 Lotus japonicus HOM05D010359 ORTHO05D002252 5.8e-06 55.1 96 35.4
Phvul.011G046250 Phaseolus vulgaris HOM05D010359 ORTHO05D002252 5.8e-06 55.1 116 30.2
Sabra04G0101600 Salix brachista HOM05D007227 ORTHO05D002252 5.8e-06 55.1 96 38.5
Gohir.A03G212200 Gossypium hirsutum HOM05D007227 ORTHO05D002252 7.6e-06 54.7 99 34.3
Gohir.D02G233600 Gossypium hirsutum HOM05D007227 ORTHO05D002252 7.6e-06 54.7 99 34.3
Gorai.005G261600 Gossypium raimondii HOM05D007227 ORTHO05D002252 7.6e-06 54.7 99 34.3
Lalb_Chr00c44g0412601 Lupinus albus HOM05D032364 ORTHO05D002252 7.6e-06 54.7 92 37.0
Thecc.02G086800 Theobroma cacao HOM05D007556 ORTHO05D002252 7.6e-06 54.7 78 39.7
COL.COLO4_11794 Corchorus olitorius HOM05D007556 ORTHO05D002252 9.9e-06 54.3 112 33.0
Gorai.002G211000 Gossypium raimondii HOM05D007227 ORTHO05D002252 9.9e-06 54.3 87 35.6
QL11p043287 Quercus lobata HOM05D007227 ORTHO05D002252 9.9e-06 54.3 83 38.6
TWI79G1510 Tripterygium wilfordii HOM05D007556 ORTHO05D002252 9.9e-06 54.3 98 37.8


User provided reference genes

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