Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0002891g0090 Nicotiana tabacum HOM05D004106 ORTHO05D004381 9.2e-87 323.6 166 100.0
Nitab4.5_0008875g0050 Nicotiana tabacum HOM05D004106 ORTHO05D004381 2.0e-86 322.4 166 99.4
PGSC0003DMG400007906 Solanum tuberosum HOM05D004106 ORTHO05D004381 2.5e-68 262.3 190 77.4
Solyc12g009980.2 Solanum lycopersicum HOM05D004106 ORTHO05D004381 4.3e-68 261.5 190 76.8
CAN.G551.46 Capsicum annuum HOM05D004106 ORTHO05D004381 1.2e-67 260.0 190 76.3
Sopen12g004850 Solanum pennellii HOM05D004106 ORTHO05D004381 2.3e-66 255.8 190 75.8
Peaxi162Scf00062g00225 Petunia axillaris HOM05D004106 ORTHO05D004381 1.3e-61 240.0 162 79.6
Cc06_g14830 Coffea canephora HOM05D004106 ORTHO05D004381 3.1e-50 202.2 195 62.1
Sabra18G0090100 Salix brachista HOM05D004106 ORTHO05D004381 4.0e-50 201.8 177 64.4
TAR383G0918 Trochodendron aralioides HOM05D004106 ORTHO05D004381 4.4e-49 198.4 192 63.0
Lalb_Chr07g0179881 Lupinus albus HOM05D004106 ORTHO05D004381 9.9e-49 197.2 196 58.7
Lsat_1_v5_gn_7_50001 Lactuca sativa HOM05D004106 ORTHO05D004381 1.7e-48 196.4 200 60.5
QL02p093501 Quercus lobata HOM05D004106 ORTHO05D004381 2.9e-48 195.7 196 60.7
Duzib168G0532 Durio zibethinus HOM05D004106 ORTHO05D004381 6.4e-48 194.5 194 60.8
COL.COLO4_18821 Corchorus olitorius HOM05D004106 ORTHO05D004381 8.4e-48 194.1 195 60.0
ECA240G3283 Erigeron canadensis HOM05D004106 ORTHO05D004381 8.4e-48 194.1 188 62.8
VMungo1080G0447 Vigna mungo HOM05D004106 ORTHO05D004381 1.4e-47 193.4 196 59.7
Glyma.12G156200 Glycine max HOM05D004106 ORTHO05D004381 1.9e-47 193.0 196 59.2
vmacro06074 Vaccinium macrocarpon HOM05D004106 ORTHO05D004381 2.4e-47 192.6 198 60.1
Ca_21133_v3 Cicer arietinum L. HOM05D004106 ORTHO05D004381 4.2e-47 191.8 159 66.7
Atru.chr7.22 Acer truncatum HOM05D004106 ORTHO05D004381 5.4e-47 191.4 192 62.0
HanXRQChr03g0065371 Helianthus annuus HOM05D004106 ORTHO05D004381 5.4e-47 191.4 189 61.9
Ciclev10009489m.g Citrus clementina HOM05D004106 ORTHO05D004381 7.1e-47 191.0 192 61.5
Migut.K00317 Erythranthe guttata HOM05D004106 ORTHO05D004381 9.3e-47 190.7 192 61.5
FAN20G0773 Fragaria x ananassa HOM05D004106 ORTHO05D004381 2.1e-46 189.5 172 64.5
GSVIVG01023623001 Vitis vinifera HOM05D004106 ORTHO05D004381 2.1e-46 189.5 196 58.7
Cpa.g.sc46.167 Carica papaya HOM05D004106 ORTHO05D004381 2.7e-46 189.1 188 60.6
Dinv08178 Davidia involucrata HOM05D004106 ORTHO05D004381 4.6e-46 188.3 195 60.5
Medtr0380s0040 Medicago truncatula HOM05D004106 ORTHO05D004381 4.6e-46 188.3 188 59.0
TAR626G0743 Trochodendron aralioides HOM05D004106 ORTHO05D004381 4.6e-46 188.3 199 60.3
Phvul.005G005700 Phaseolus vulgaris HOM05D004106 ORTHO05D004381 6.0e-46 188.0 196 58.7
arahy.Tifrunner.gnm1.ann1.U84FQB Arachis hypogaea HOM05D004106 ORTHO05D004381 7.8e-46 187.6 196 58.2
Potri.018G105600 Populus trichocarpa HOM05D004106 ORTHO05D004381 7.8e-46 187.6 196 57.7
Glyma.06G225800 Glycine max HOM05D004106 ORTHO05D004381 1.7e-45 186.4 196 58.7
Lalb_Chr13g0300831 Lupinus albus HOM05D004106 ORTHO05D004381 1.7e-45 186.4 193 59.1
PSO384G4038 Papaver somniferum HOM05D004106 ORTHO05D004381 1.7e-45 186.4 196 60.2
PSO339G2511 Papaver somniferum HOM05D004106 ORTHO05D004381 2.3e-45 186.0 196 60.2
SalBow1G1642 Salvia bowleyana HOM05D004106 ORTHO05D004381 2.3e-45 186.0 196 58.2
Lj4g0010746 Lotus japonicus HOM05D004106 ORTHO05D004381 3.9e-45 185.3 192 59.9
Manes.14G144700 Manihot esculenta HOM05D004106 ORTHO05D004381 6.6e-45 184.5 195 58.5
Eucgr.C02498 Eucalyptus grandis HOM05D004106 ORTHO05D004381 8.7e-45 184.1 176 61.4
FAN15G2986 Fragaria x ananassa HOM05D004106 ORTHO05D004381 8.7e-45 184.1 191 59.7
Gohir.A05G053000 Gossypium hirsutum HOM05D004106 ORTHO05D004381 8.7e-45 184.1 196 58.7
Lj6g0027633 Lotus japonicus HOM05D004106 ORTHO05D004381 8.7e-45 184.1 188 59.0
Actinidia14131 Actinidia chinensis HOM05D004106 ORTHO05D004381 1.1e-44 183.7 193 59.1
Peaxi162Scf00045g02039 Petunia axillaris HOM05D004106 ORTHO05D004381 1.1e-44 183.7 171 62.6
Gohir.D05G054601 Gossypium hirsutum HOM05D004106 ORTHO05D004381 1.5e-44 183.3 196 58.2
Gorai.009G056300 Gossypium raimondii HOM05D004106 ORTHO05D004381 1.5e-44 183.3 196 58.2
arahy.Tifrunner.gnm1.ann1.J1V5JT Arachis hypogaea HOM05D004106 ORTHO05D004381 1.9e-44 183.0 196 57.1
Dinv08223 Davidia involucrata HOM05D004106 ORTHO05D004381 1.9e-44 183.0 194 58.2
Duzib150G0841 Durio zibethinus HOM05D004106 ORTHO05D004381 1.9e-44 183.0 190 59.5
Eucgr.C02535 Eucalyptus grandis HOM05D004106 ORTHO05D004381 1.9e-44 183.0 176 61.4
FvH4_2g41160 Fragaria vesca HOM05D004106 ORTHO05D004381 2.5e-44 182.6 191 59.2
FAN27G3303 Fragaria x ananassa HOM05D004106 ORTHO05D004381 2.5e-44 182.6 191 59.2
MBI15_g18237_MAGBIO Magnolia biondii HOM05D004106 ORTHO05D004381 3.3e-44 182.2 199 56.3
RcHm_v2.0_Chr6g0299371 Rosa chinensis HOM05D004106 ORTHO05D004381 3.3e-44 182.2 192 58.9
CsaV3_1G029020 Cucumis sativus L. HOM05D004106 ORTHO05D004381 7.3e-44 181.0 187 58.8
Gohir.A07G027300 Gossypium hirsutum HOM05D004106 ORTHO05D004381 9.6e-44 180.6 196 57.1
Gorai.001G032700 Gossypium raimondii HOM05D004106 ORTHO05D004381 9.6e-44 180.6 196 57.1
TPR.G3593 Trifolium pratense HOM05D004106 ORTHO05D004381 9.6e-44 180.6 199 56.3
TWI63G0696 Tripterygium wilfordii HOM05D004106 ORTHO05D004381 9.6e-44 180.6 198 58.1
PGR102G1248 Punica granatum HOM05D004106 ORTHO05D004381 1.3e-43 180.3 197 57.4
EL10Ac2g02497 Beta vulgaris HOM05D004106 ORTHO05D004381 2.1e-43 179.5 187 58.3
ClCG06G012460 Citrullus lanatus HOM05D004106 ORTHO05D004381 2.8e-43 179.1 188 56.9
Prupe.7G264300 Prunus persica HOM05D004106 ORTHO05D004381 2.8e-43 179.1 194 58.2
TWI34G1622 Tripterygium wilfordii HOM05D004106 ORTHO05D004381 2.8e-43 179.1 196 57.1
CANSAT11G1220 Cannabis sativa HOM05D004106 ORTHO05D004381 4.8e-43 178.3 165 63.6
CiPaw.15G167000 Carya illinoinensis HOM05D004106 ORTHO05D004381 4.8e-43 178.3 194 56.7
Medtr4g130730 Medicago truncatula HOM05D004106 ORTHO05D004381 4.8e-43 178.3 178 60.1
Prupe.1G394300 Prunus persica HOM05D004106 ORTHO05D004381 4.8e-43 178.3 192 58.3
HanXRQChr09g0244601 Helianthus annuus HOM05D004106 ORTHO05D004381 6.2e-43 177.9 189 59.3
MSTRG.1632 Avicennia marina HOM05D004106 ORTHO05D004381 1.1e-42 177.2 188 56.9
Oeu048547.1 Olea europaea HOM05D004106 ORTHO05D004381 3.1e-42 175.6 195 56.4
Hund02987 Selenicereus undatus HOM05D004106 ORTHO05D004381 3.1e-42 175.6 192 58.3
MD08G1056000 Malus domestica HOM05D004106 ORTHO05D004381 4.0e-42 175.3 193 57.5
BcaB03g12652 Brassica carinata HOM05D004106 ORTHO05D004381 6.9e-42 174.5 143 68.5
Sed0000106 Sechium edule HOM05D004106 ORTHO05D004381 6.9e-42 174.5 189 56.1
Zm00001eb206700 Zea mays HOM05D004106 ORTHO05D004381 6.9e-42 174.5 189 58.7
Nitab4.5_0002011g0110 Nicotiana tabacum HOM05D004106 ORTHO05D004381 9.0e-42 174.1 195 54.4
Nitab4.5_0003563g0010 Nicotiana tabacum HOM05D004106 ORTHO05D004381 9.0e-42 174.1 179 58.7
THA.LOC104819993 Tarenaya hassleriana HOM05D004106 ORTHO05D004381 9.0e-42 174.1 150 64.7
TPR.G24849 Trifolium pratense HOM05D004106 ORTHO05D004381 9.0e-42 174.1 163 61.3
CSS0032495 Camellia sinensis var. sinensis HOM05D004106 ORTHO05D004381 2.0e-41 172.9 139 69.1
Os02g0180200 Oryza sativa ssp. japonica HOM05D004106 ORTHO05D004381 2.0e-41 172.9 188 56.4
ATR0580G427 Amborella trichopoda HOM05D004106 ORTHO05D004381 3.4e-41 172.2 202 55.0
MBI14_g09102_MAGBIO Magnolia biondii HOM05D004106 ORTHO05D004381 3.4e-41 172.2 162 61.1
Psat1g022480 Pisum sativum HOM05D004106 ORTHO05D004381 3.4e-41 172.2 191 57.1
A08p19160 Brassica napus HOM05D004106 ORTHO05D004381 5.8e-41 171.4 170 60.0
Oeu006863.1 Olea europaea HOM05D004106 ORTHO05D004381 5.8e-41 171.4 177 58.2
THA.LOC104803919 Tarenaya hassleriana HOM05D004106 ORTHO05D004381 7.6e-41 171.0 140 67.1
TWI32G0932 Tripterygium wilfordii HOM05D004106 ORTHO05D004381 7.6e-41 171.0 187 58.3
SGA_v2.0_scaffold4G02174 Striga asiatica HOM05D004106 ORTHO05D004381 9.9e-41 170.6 182 57.7
Migut.E01458 Erythranthe guttata HOM05D004106 ORTHO05D004381 1.7e-40 169.9 167 59.9
Psat4g009640 Pisum sativum HOM05D004106 ORTHO05D004381 1.7e-40 169.9 166 59.0
HPP92_004701 Vanilla planifolia HOM05D004106 ORTHO05D004381 2.2e-40 169.5 203 53.7
Sp7g28490 Schrenkiella parvula HOM05D004106 ORTHO05D004381 2.9e-40 169.1 137 68.6
BraA08t33877Z Brassica rapa HOM05D004106 ORTHO05D004381 4.9e-40 168.3 137 68.6
Thhalv10026346m.g Eutrema salsugineum HOM05D004106 ORTHO05D004381 6.4e-40 167.9 137 67.9
AL4G14070 Arabidopsis lyrata HOM05D004106 ORTHO05D004381 1.4e-39 166.8 145 64.1
Carub.0004s0318 Capsella rubella HOM05D004106 ORTHO05D004381 1.4e-39 166.8 138 66.7
AL7G21520 Arabidopsis lyrata HOM05D004106 ORTHO05D004381 2.4e-39 166.0 177 58.8
Sp4g02930 Schrenkiella parvula HOM05D004106 ORTHO05D004381 2.4e-39 166.0 137 67.2
Aa31LG2G19880 Aethionema arabicum HOM05D004106 ORTHO05D004381 3.2e-39 165.6 187 56.7
AT4G30620 Arabidopsis thaliana HOM05D004106 ORTHO05D004381 3.2e-39 165.6 144 64.6
CAN.G353.7 Capsicum annuum HOM05D004106 ORTHO05D004381 3.2e-39 165.6 169 58.6
CARHR184720 Cardamine hirsuta HOM05D004106 ORTHO05D004381 4.2e-39 165.2 144 63.9
Carub.0007s0995 Capsella rubella HOM05D004106 ORTHO05D004381 5.4e-39 164.9 165 60.0
Thecc.09G028700 Theobroma cacao HOM05D004106 ORTHO05D004381 7.1e-39 164.5 161 59.6
AT2G24020 Arabidopsis thaliana HOM05D004106 ORTHO05D004381 9.3e-39 164.1 144 63.9
BcaC07g40965 Brassica carinata HOM05D004106 ORTHO05D004381 9.3e-39 164.1 140 64.3
CDE05G2988 Ceratophyllum demersum HOM05D004106 ORTHO05D004381 9.3e-39 164.1 136 66.9
Sopen08g002730 Solanum pennellii HOM05D004106 ORTHO05D004381 1.6e-38 163.3 169 57.4
PGSC0003DMG400026299 Solanum tuberosum HOM05D004106 ORTHO05D004381 2.7e-38 162.5 169 57.4
Hund25620 Selenicereus undatus HOM05D004106 ORTHO05D004381 3.5e-38 162.2 140 65.7
Solyc08g006780.3 Solanum lycopersicum HOM05D004106 ORTHO05D004381 3.5e-38 162.2 169 57.4
BolC3t21168H Brassica oleracea HOM05D004106 ORTHO05D004381 4.6e-38 161.8 172 55.8
A09p56640 Brassica napus HOM05D004106 ORTHO05D004381 7.9e-38 161.0 141 63.8
C08p39590 Brassica napus HOM05D004106 ORTHO05D004381 7.9e-38 161.0 141 63.8
BolC8t51532H Brassica oleracea HOM05D004106 ORTHO05D004381 7.9e-38 161.0 141 63.8
BraA09t41055Z Brassica rapa HOM05D004106 ORTHO05D004381 7.9e-38 161.0 141 63.8
CDE02G1701 Ceratophyllum demersum HOM05D004106 ORTHO05D004381 7.9e-38 161.0 195 52.3
Manes.03G008200 Manihot esculenta HOM05D004106 ORTHO05D004381 7.9e-38 161.0 173 56.6
Thhalv10000343m.g Eutrema salsugineum HOM05D004106 ORTHO05D004381 1.3e-37 160.2 132 67.4
unitig_749.g13818 Utricularia gibba HOM05D004106 ORTHO05D004381 1.3e-37 160.2 149 63.1
Aqoxy7G02301 Aquilegia oxysepala HOM05D004106 ORTHO05D004381 3.9e-37 158.7 116 75.0
Actinidia23107 Actinidia chinensis HOM05D004106 ORTHO05D004381 5.1e-37 158.3 182 56.0
Sc09g0010670 Simmondsia chinensis HOM05D004106 ORTHO05D004381 6.7e-37 157.9 163 58.3
MD15G1041000 Malus domestica HOM05D004106 ORTHO05D004381 2.5e-36 156.0 193 52.8
Cfa013048 Carpinus fangiana HOM05D004106 ORTHO05D004381 5.6e-36 154.8 113 76.1
MELO3C010214.2 Cucumis melo HOM05D004106 ORTHO05D004381 1.3e-35 153.7 155 58.7
Lalb_Chr12g0198731 Lupinus albus HOM05D004106 ORTHO05D004381 1.6e-35 153.3 112 74.1
C03p88620 Brassica napus HOM05D004106 ORTHO05D004381 3.7e-35 152.1 164 55.5
BcaC01g01145 Brassica carinata HOM05D004106 ORTHO05D004381 6.2e-35 151.4 112 73.2
Haze_21409 Corylus avellana HOM05D004106 ORTHO05D004381 6.2e-35 151.4 112 75.0
Haze_19171 Corylus avellana HOM05D004106 ORTHO05D004381 1.1e-34 150.6 108 75.0
Aqoxy7G02464 Aquilegia oxysepala HOM05D004106 ORTHO05D004381 1.8e-34 149.8 138 64.5
Mapoly0031s0030 Marchantia polymorpha HOM05D004106 ORTHO05D004381 2.4e-34 149.4 152 55.3
Rhsim07G0165600 Rhododendron simsii HOM05D004106 ORTHO05D004381 2.4e-34 149.4 160 58.1
vmacro05152 Vaccinium macrocarpon HOM05D004106 ORTHO05D004381 3.1e-34 149.1 199 48.2
AUR62024802 Chenopodium quinoa HOM05D004106 ORTHO05D004381 6.9e-34 147.9 114 70.2
AUR62032418 Chenopodium quinoa HOM05D004106 ORTHO05D004381 6.9e-34 147.9 114 70.2
Ah.10g025490 Amaranthus hybridus HOM05D004106 ORTHO05D004381 4.5e-33 145.2 171 56.1
Hma1.2p1_2680F.1_g326820 Hydrangea macrophylla HOM05D004106 ORTHO05D004381 3.8e-32 142.1 148 58.1
Pp3c2_35530 Physcomitrium patens HOM05D004106 ORTHO05D004381 3.8e-32 142.1 187 47.1
Pp3c11_2360 Physcomitrium patens HOM05D004106 ORTHO05D004381 4.2e-31 138.7 141 53.9
Pp3c1_1160 Physcomitrium patens HOM05D004106 ORTHO05D004381 5.5e-31 138.3 189 46.0
Zm00001eb234060 Zea mays HOM05D004106 ORTHO05D004381 9.3e-31 137.5 170 54.1
Nn8g39925 Nelumbo nucifera HOM05D004106 ORTHO05D004381 3.5e-30 135.6 178 52.2
Aa31LG7G12810 Aethionema arabicum HOM05D004106 ORTHO05D004381 4.6e-30 135.2 209 45.9
Actinidia38669 Actinidia chinensis HOM05D004106 ORTHO05D004381 2.3e-29 132.9 154 53.9
SMO364G0386 Selaginella moellendorffii HOM05D004106 ORTHO05D004381 1.9e-28 129.8 108 63.9
CANSAT54G0776 Cannabis sativa HOM05D004106 ORTHO05D004381 1.3e-27 127.1 192 43.2
AagrBONN_evm.TU.Sc2ySwM_228.5744 Anthoceros agrestis HOM05D004106 ORTHO05D004381 2.8e-27 125.9 100 66.0
CBR_g54183 Chara braunii HOM05D004106 ORTHO05D004381 7.6e-25 117.9 111 56.8
CBR_g728 Chara braunii HOM05D004106 ORTHO05D004381 7.6e-25 117.9 113 57.5
Peaxi162Scf00387g00211 Petunia axillaris HOM05D004106 ORTHO05D004381 1.0e-21 107.5 109 55.0
Gohir.D07G031300 Gossypium hirsutum HOM05D004106 ORTHO05D004381 1.3e-21 107.1 127 52.8
QL02p018811 Quercus lobata HOM05D004106 ORTHO05D004381 1.9e-20 103.2 107 54.2
PRCOL_00004350 Prasinoderma coloniale HOM05D004106 ORTHO05D004381 1.8e-18 96.7 111 48.6
Cre10.g458550 Chlamydomonas reinhardtii HOM05D004106 ORTHO05D004381 1.0e-16 90.9 124 43.5
BraA02t07117Z Brassica rapa HOM05D004106 ORTHO05D004381 1.4e-15 87.0 70 68.6
A02p20860 Brassica napus HOM05D004106 ORTHO05D004381 5.5e-15 85.1 94 54.3
BcaB05g25007 Brassica carinata HOM05D004106 ORTHO05D004381 1.2e-14 84.0 70 67.1
C02p32810 Brassica napus HOM05D004106 ORTHO05D004381 4.6e-14 82.0 70 67.1
BcaC03g15698 Brassica carinata HOM05D004106 ORTHO05D004381 3.0e-13 79.3 70 65.7
BolC2t09418H Brassica oleracea HOM05D004106 ORTHO05D004381 3.0e-13 79.3 70 65.7
SEGI_18679 Sequoiadendron giganteum HOM05D004106 ORTHO05D004381 3.3e-12 75.9 44 88.6


User provided reference genes

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