Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0002877g0030 Nicotiana tabacum HOM05D007186 ORTHO05D008970 1.1e-92 343.2 170 100.0
Nitab4.5_0011275g0030 Nicotiana tabacum HOM05D007186 ORTHO05D008970 1.1e-84 316.6 173 90.2
Peaxi162Scf00147g01818 Petunia axillaris HOM05D007186 ORTHO05D008970 5.2e-69 264.6 175 76.0
PGSC0003DMG400030273 Solanum tuberosum HOM05D007186 ORTHO05D008970 1.2e-68 263.5 164 78.0
Sopen05g025420 Solanum pennellii HOM05D007186 ORTHO05D008970 3.4e-68 261.9 154 80.5
Solyc05g041430.3 Solanum lycopersicum HOM05D007186 ORTHO05D008970 9.8e-68 260.4 154 79.9
Dinv07835 Davidia involucrata HOM05D007186 ORTHO05D008970 1.4e-61 240.0 169 70.4
Rhsim06G0171800 Rhododendron simsii HOM05D007186 ORTHO05D008970 1.8e-58 229.6 146 73.3
CSS0038956 Camellia sinensis var. sinensis HOM05D007186 ORTHO05D008970 2.3e-56 222.6 165 66.7
FvH4_6g41490 Fragaria vesca HOM05D007186 ORTHO05D008970 5.0e-56 221.5 160 65.6
TAR624G0839 Trochodendron aralioides HOM05D007186 ORTHO05D008970 6.6e-56 221.1 166 66.9
TWI36G0211 Tripterygium wilfordii HOM05D007186 ORTHO05D008970 8.6e-56 220.7 154 66.2
COL.COLO4_06941 Corchorus olitorius HOM05D007186 ORTHO05D008970 1.9e-55 219.5 163 65.0
FAN05G2361 Fragaria x ananassa HOM05D007186 ORTHO05D008970 2.5e-55 219.2 160 65.0
FAN09G3526 Fragaria x ananassa HOM05D007186 ORTHO05D008970 4.3e-55 218.4 160 66.2
Gohir.D07G195800 Gossypium hirsutum HOM05D007186 ORTHO05D008970 9.5e-55 217.2 161 65.8
CiPaw.04G194300 Carya illinoinensis HOM05D007186 ORTHO05D008970 1.2e-54 216.9 157 66.9
RcHm_v2.0_Chr2g0157151 Rosa chinensis HOM05D007186 ORTHO05D008970 1.6e-54 216.5 160 64.4
Gorai.001G219300 Gossypium raimondii HOM05D007186 ORTHO05D008970 2.8e-54 215.7 161 65.2
QL08p029418 Quercus lobata HOM05D007186 ORTHO05D008970 4.7e-54 214.9 159 64.2
Potri.014G162700 Populus trichocarpa HOM05D007186 ORTHO05D008970 8.0e-54 214.2 158 65.8
Sabra14G0124100 Salix brachista HOM05D007186 ORTHO05D008970 2.3e-53 212.6 156 64.1
PSO675G5362 Papaver somniferum HOM05D007186 ORTHO05D008970 4.0e-53 211.8 161 63.4
Prupe.3G204800 Prunus persica HOM05D007186 ORTHO05D008970 1.2e-52 210.3 156 65.4
AUR62015089 Chenopodium quinoa HOM05D007186 ORTHO05D008970 3.4e-52 208.8 168 58.3
AUR62044229 Chenopodium quinoa HOM05D007186 ORTHO05D008970 3.4e-52 208.8 168 58.3
AUR62044345 Chenopodium quinoa HOM05D007186 ORTHO05D008970 3.4e-52 208.8 168 58.3
Ciclev10016992m.g Citrus clementina HOM05D007186 ORTHO05D008970 3.4e-52 208.8 162 64.2
Phvul.008G287400 Phaseolus vulgaris HOM05D007186 ORTHO05D008970 1.3e-51 206.8 145 65.5
GSVIVG01030422001 Vitis vinifera HOM05D007186 ORTHO05D008970 1.3e-51 206.8 156 64.1
AUR62017547 Chenopodium quinoa HOM05D007186 ORTHO05D008970 3.7e-51 205.3 168 57.7
Glyma.02G307400 Glycine max HOM05D007186 ORTHO05D008970 4.9e-51 204.9 161 63.4
Psat2g003840 Pisum sativum HOM05D007186 ORTHO05D008970 4.9e-51 204.9 153 62.7
PGR142G1014 Punica granatum HOM05D007186 ORTHO05D008970 6.4e-51 204.5 152 63.8
TPR.G15068 Trifolium pratense HOM05D007186 ORTHO05D008970 8.3e-51 204.1 160 61.9
VMungo0647G1315 Vigna mungo HOM05D007186 ORTHO05D008970 8.3e-51 204.1 145 66.2
Atru.chr6.3329 Acer truncatum HOM05D007186 ORTHO05D008970 1.1e-50 203.8 167 60.5
MD09G1119400 Malus domestica HOM05D007186 ORTHO05D008970 2.4e-50 202.6 154 64.3
Medtr5g097970 Medicago truncatula HOM05D007186 ORTHO05D008970 2.4e-50 202.6 145 63.4
CANSAT54G2500 Cannabis sativa HOM05D007186 ORTHO05D008970 5.4e-50 201.4 170 59.4
Eucgr.K00670 Eucalyptus grandis HOM05D007186 ORTHO05D008970 5.4e-50 201.4 154 64.3
CsaV3_6G009340 Cucumis sativus L. HOM05D007186 ORTHO05D008970 7.0e-50 201.1 166 59.6
MELO3C019365.2 Cucumis melo HOM05D007186 ORTHO05D008970 1.6e-49 199.9 151 62.9
Actinidia07891 Actinidia chinensis HOM05D007186 ORTHO05D008970 3.5e-49 198.7 151 65.6
Hund24136 Selenicereus undatus HOM05D007186 ORTHO05D008970 1.0e-48 197.2 160 57.5
MBI19_g06151_MAGBIO Magnolia biondii HOM05D007186 ORTHO05D008970 1.7e-48 196.4 133 69.2
Aqoxy1G02832 Aquilegia oxysepala HOM05D007186 ORTHO05D008970 1.5e-47 193.4 150 56.7
THA.LOC104808856 Tarenaya hassleriana HOM05D007186 ORTHO05D008970 1.9e-47 193.0 147 59.9
unitig_578.g16640 Utricularia gibba HOM05D007186 ORTHO05D008970 4.3e-47 191.8 156 57.7
Duzib138G0377 Durio zibethinus HOM05D007186 ORTHO05D008970 7.3e-47 191.0 137 66.4
Hma1.2p1_0133F.1_g061060 Hydrangea macrophylla HOM05D007186 ORTHO05D008970 9.5e-47 190.7 132 67.4
Haze_12721 Corylus avellana HOM05D007186 ORTHO05D008970 1.4e-45 186.8 228 43.9
LjContig00081g0025535 Lotus japonicus HOM05D000229 ORTHO05D008970 4.0e-45 185.3 149 60.4
HPP92_022801 Vanilla planifolia HOM05D007186 ORTHO05D008970 8.9e-45 184.1 147 58.5
arahy.Tifrunner.gnm1.ann1.HI5B62 Arachis hypogaea HOM05D007186 ORTHO05D008970 1.2e-44 183.7 154 57.8
Lsat_1_v5_gn_9_105540 Lactuca sativa HOM05D007186 ORTHO05D008970 9.8e-44 180.6 160 55.0
Sed0024069 Sechium edule HOM05D007186 ORTHO05D008970 2.9e-43 179.1 140 60.7
Oeu040479.1 Olea europaea HOM05D007186 ORTHO05D008970 3.7e-43 178.7 118 74.6
Lalb_Chr04g0247191 Lupinus albus HOM05D007186 ORTHO05D008970 6.4e-43 177.9 144 56.9
ECA240G1183 Erigeron canadensis HOM05D007186 ORTHO05D008970 8.3e-43 177.6 161 54.7
ClCG02G009490 Citrullus lanatus HOM05D007186 ORTHO05D008970 1.4e-42 176.8 212 47.6
HanXRQChr03g0075731 Helianthus annuus HOM05D007186 ORTHO05D008970 1.9e-42 176.4 149 57.7
AUR62044292 Chenopodium quinoa HOM05D007186 ORTHO05D008970 3.2e-42 175.6 161 52.8
arahy.Tifrunner.gnm1.ann1.CRYT1U Arachis hypogaea HOM05D007186 ORTHO05D008970 1.2e-41 173.7 166 53.6
C03p55060 Brassica napus HOM05D007186 ORTHO05D008970 1.6e-41 173.3 148 54.1
BolC3t17781H Brassica oleracea HOM05D007186 ORTHO05D008970 1.6e-41 173.3 148 54.1
Manes.13G063846 Manihot esculenta HOM05D007186 ORTHO05D008970 3.5e-41 172.2 140 60.0
BcaC01g03189 Brassica carinata HOM05D007186 ORTHO05D008970 4.6e-41 171.8 148 54.1
AL3G42380 Arabidopsis lyrata HOM05D007186 ORTHO05D008970 3.0e-40 169.1 147 52.4
Migut.M00010 Erythranthe guttata HOM05D007186 ORTHO05D008970 3.0e-40 169.1 152 56.6
ATR0712G003 Amborella trichopoda HOM05D007186 ORTHO05D008970 8.6e-40 167.5 139 56.1
Thhalv10002690m.g Eutrema salsugineum HOM05D007186 ORTHO05D008970 1.1e-39 167.2 151 51.0
Sp3g23400 Schrenkiella parvula HOM05D007186 ORTHO05D008970 1.5e-39 166.8 148 51.4
CARHR102760 Cardamine hirsuta HOM05D007186 ORTHO05D008970 2.5e-39 166.0 147 53.1
Carub.0003s2639 Capsella rubella HOM05D007186 ORTHO05D008970 4.3e-39 165.2 148 51.4
Glyma.14G005600 Glycine max HOM05D007186 ORTHO05D008970 1.2e-38 163.7 129 62.0
Lj8A132T57 Lonicera japonica HOM05D007186 ORTHO05D008970 3.6e-38 162.2 153 56.2
SalBow7G1582 Salvia bowleyana HOM05D000037 ORTHO05D000150 5.2e-37 158.3 140 56.4
BraA03t13576Z Brassica rapa HOM05D007186 ORTHO05D008970 1.2e-36 157.1 132 53.8
Zm00001eb245650 Zea mays HOM05D007186 ORTHO05D008970 1.2e-36 157.1 125 57.6
A03p44430 Brassica napus HOM05D007186 ORTHO05D008970 1.5e-36 156.8 132 53.8
C03p55120 Brassica napus HOM05D007186 ORTHO05D008970 4.9e-35 151.8 132 50.8
BcaC01g03185 Brassica carinata HOM05D007186 ORTHO05D008970 6.4e-35 151.4 132 51.5
BcaB08g34487 Brassica carinata HOM05D007186 ORTHO05D008970 8.3e-35 151.0 137 51.1
BolC3t17784H Brassica oleracea HOM05D007186 ORTHO05D008970 1.9e-34 149.8 132 50.8
Os02g0588600 Oryza sativa ssp. japonica HOM05D007186 ORTHO05D008970 9.2e-34 147.5 144 50.0
SEGI_21441 Sequoiadendron giganteum HOM05D007186 ORTHO05D008970 1.6e-33 146.7 169 43.2
Aa31sc53G20 Aethionema arabicum HOM05D007186 ORTHO05D006113 1.7e-32 143.3 149 47.7
BcaC01g03187 Brassica carinata HOM05D007186 ORTHO05D008970 1.7e-32 143.3 128 51.6
DCAR_032166 Daucus carota HOM05D000693 ORTHO05D008970 3.3e-31 139.0 98 64.3
vmacro12130 Vaccinium macrocarpon HOM05D007186 ORTHO05D008970 2.3e-29 132.9 168 50.0
EL10Ac9g22768 Beta vulgaris HOM05D007186 ORTHO05D008970 1.9e-26 123.2 93 65.6
FAN14G0401 Fragaria x ananassa HOM05D007186 ORTHO05D008970 4.1e-26 122.1 87 69.0
Gohir.A07G189700 Gossypium hirsutum HOM05D007186 ORTHO05D008970 9.2e-26 120.9 84 71.4
Thecc.01G185600 Theobroma cacao HOM05D007186 ORTHO05D008970 1.3e-24 117.1 84 71.4
FAN02G3692 Fragaria x ananassa HOM05D007186 ORTHO05D008970 1.7e-24 116.7 94 63.8
Sc20g0003870 Simmondsia chinensis HOM05D007186 ORTHO05D008970 8.6e-24 114.4 100 51.0
Pp3c15_5880 Physcomitrium patens HOM05D007186 ORTHO05D008970 4.3e-23 112.1 153 40.5
MSTRG.6661 Avicennia marina HOM05D007186 ORTHO05D008970 7.3e-23 111.3 91 64.8
Nn1g07413 Nelumbo nucifera HOM05D007186 ORTHO05D008970 2.8e-22 109.4 75 62.7
arahy.Tifrunner.gnm1.ann1.I316DY Arachis hypogaea HOM05D007186 ORTHO05D008970 8.1e-22 107.8 90 55.6
Mapoly0123s0026 Marchantia polymorpha HOM05D007186 ORTHO05D008970 3.4e-20 102.4 162 33.3
SMO364G0535 Selaginella moellendorffii HOM05D007186 ORTHO05D008970 4.4e-20 102.1 138 38.4
Eucgr.K00669 Eucalyptus grandis HOM05D007186 ORTHO05D008970 7.6e-20 101.3 72 62.5
AUR62025215 Chenopodium quinoa HOM05D007186 ORTHO05D008970 1.7e-19 100.1 77 62.3
arahy.Tifrunner.gnm1.ann1.ZIY68Y Arachis hypogaea HOM05D007186 ORTHO05D008970 1.1e-18 97.4 86 53.5
Sopen05g025410 Solanum pennellii HOM05D007186 ORTHO05D008970 2.5e-15 86.3 46 84.8
arahy.Tifrunner.gnm1.ann1.5R4F72 Arachis hypogaea HOM05D007186 ORTHO05D008970 2.0e-12 76.6 115 38.3
MCO11G099 Micromonas commoda HOM05D007186 ORTHO05D008970 1.2e-09 67.4 187 27.8
AT2G04790 Arabidopsis thaliana HOM05D007186 ORTHO05D008970 8.7e-08 61.2 43 60.5
Thhalv10002943m.g Eutrema salsugineum HOM05D007186 ORTHO05D008970 8.7e-08 61.2 75 41.3


User provided reference genes

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