Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0002875g0050 Nicotiana tabacum HOM05D007939 ORTHO05D010027 2.3e-27 124.8 61 100.0
Nitab4.5_0000642g0220 Nicotiana tabacum HOM05D007939 ORTHO05D010027 1.3e-17 92.4 45 97.8
Solyc03g113670.4 Solanum lycopersicum HOM05D007939 ORTHO05D010027 3.1e-16 87.8 45 91.1
Peaxi162Scf00017g02235 Petunia axillaris HOM05D007939 ORTHO05D010027 5.9e-15 83.6 45 86.7
Rhsim08G0164200 Rhododendron simsii HOM05D007939 ORTHO05D010027 1.7e-14 82.0 52 73.1
CAN.G853.35 Capsicum annuum HOM05D007939 ORTHO05D010027 5.0e-14 80.5 45 82.2
MELO3C002231.2 Cucumis melo HOM05D007939 ORTHO05D010027 5.0e-14 80.5 55 67.3
Thhalv10010893m.g Eutrema salsugineum HOM05D007939 ORTHO05D010027 6.5e-14 80.1 55 65.5
CARHR156540 Cardamine hirsuta HOM05D007939 ORTHO05D010027 8.5e-14 79.7 55 65.5
CSS0025662 Camellia sinensis var. sinensis HOM05D007939 ORTHO05D010027 1.1e-13 79.3 45 80.0
Potri.012G074300 Populus trichocarpa HOM05D007939 ORTHO05D010027 1.1e-13 79.3 45 77.8
Sp5g14120 Schrenkiella parvula HOM05D007939 ORTHO05D010027 1.4e-13 79.0 55 63.6
BcaB01g00871 Brassica carinata HOM05D007939 ORTHO05D010027 1.9e-13 78.6 55 63.6
C03p72070 Brassica napus HOM05D007939 ORTHO05D010027 1.9e-13 78.6 55 63.6
BolC3t19505H Brassica oleracea HOM05D007939 ORTHO05D010027 1.9e-13 78.6 55 63.6
BraA06t25058Z Brassica rapa HOM05D007939 ORTHO05D010027 1.9e-13 78.6 55 63.6
Sabra12G0052700 Salix brachista HOM05D007939 ORTHO05D010027 1.9e-13 78.6 58 63.8
Sabra15G0093500 Salix brachista HOM05D007939 ORTHO05D010027 2.5e-13 78.2 63 58.7
CSS0005245 Camellia sinensis var. sinensis HOM05D007939 ORTHO05D010027 3.2e-13 77.8 45 77.8
AL5G27140 Arabidopsis lyrata HOM05D007939 ORTHO05D010027 5.5e-13 77.0 55 61.8
Haze_07419 Corylus avellana HOM05D007939 ORTHO05D010027 5.5e-13 77.0 46 73.9
Nn4g22962 Nelumbo nucifera HOM05D007939 ORTHO05D010027 5.5e-13 77.0 45 73.3
BcaB02g10687 Brassica carinata HOM05D007939 ORTHO05D010027 9.4e-13 76.3 46 71.7
Ciclev10023252m.g Citrus clementina HOM05D007939 ORTHO05D010027 9.4e-13 76.3 55 61.8
Rhsim12G0160700 Rhododendron simsii HOM05D007939 ORTHO05D010027 9.4e-13 76.3 45 75.6
BcaC01g01771 Brassica carinata HOM05D007939 ORTHO05D010027 1.2e-12 75.9 45 73.3
Carub.0005s1396 Capsella rubella HOM05D007939 ORTHO05D010027 1.2e-12 75.9 55 67.3
Cfa019042 Carpinus fangiana HOM05D007939 ORTHO05D010027 1.6e-12 75.5 45 73.3
Sed0024093 Sechium edule HOM05D007939 ORTHO05D010027 1.6e-12 75.5 45 75.6
Nn3g17057 Nelumbo nucifera HOM05D007939 ORTHO05D010027 2.7e-12 74.7 45 71.1
Prupe.5G181400 Prunus persica HOM05D007939 ORTHO05D010027 3.6e-12 74.3 55 58.2
ClCG01G014170 Citrullus lanatus HOM05D007939 ORTHO05D010027 4.6e-12 73.9 45 73.3
CsaV3_1G008140 Cucumis sativus L. HOM05D007939 ORTHO05D010027 4.6e-12 73.9 45 73.3
Oeu046758.2 Olea europaea HOM05D007939 ORTHO05D010027 4.6e-12 73.9 46 71.7
Aa31LG4G16500 Aethionema arabicum HOM05D007939 ORTHO05D010027 6.1e-12 73.6 46 69.6
SGA_v2.0_scaffold7G04104 Striga asiatica HOM05D007939 ORTHO05D010027 6.1e-12 73.6 51 62.7
DCAR_021553 Daucus carota HOM05D007939 ORTHO05D010027 7.9e-12 73.2 45 73.3
CiPaw.11G033900 Carya illinoinensis HOM05D007939 ORTHO05D010027 1.0e-11 72.8 45 68.9
SalBow3G2524 Salvia bowleyana HOM05D007939 ORTHO05D010027 1.0e-11 72.8 44 72.7
C03p66950 Brassica napus HOM05D007939 ORTHO05D010027 1.4e-11 72.4 46 69.6
BolC3t18968H Brassica oleracea HOM05D007939 ORTHO05D010027 1.8e-11 72.0 46 69.6
Lsat_1_v5_gn_4_74421 Lactuca sativa HOM05D007939 ORTHO05D010027 1.8e-11 72.0 45 73.3
Oeu041591.1 Olea europaea HOM05D007939 ORTHO05D010027 1.8e-11 72.0 45 71.1
HanXRQChr09g0271581 Helianthus annuus HOM05D007939 ORTHO05D010027 2.3e-11 71.6 45 71.1
MD14G1189000 Malus domestica HOM05D007939 ORTHO05D010027 3.0e-11 71.2 45 66.7
RcHm_v2.0_Chr7g0179931 Rosa chinensis HOM05D007939 ORTHO05D010027 3.0e-11 71.2 44 68.2
Cc04_g16150 Coffea canephora HOM05D007939 ORTHO05D010027 3.9e-11 70.9 44 68.2
Glyma.05G032500 Glycine max HOM05D007939 ORTHO05D010027 3.9e-11 70.9 47 68.1
Lj9A455T57 Lonicera japonica HOM05D007939 ORTHO05D010027 3.9e-11 70.9 45 71.1
Manes.14G071800 Manihot esculenta HOM05D007939 ORTHO05D010027 3.9e-11 70.9 45 68.9
COL.COLO4_05795 Corchorus olitorius HOM05D007939 ORTHO05D010027 5.1e-11 70.5 46 65.2
Thecc.03G001700 Theobroma cacao HOM05D007939 ORTHO05D010027 6.7e-11 70.1 45 66.7
Lj4g0008013 Lotus japonicus HOM05D007939 ORTHO05D010027 2.0e-10 68.6 47 63.8
Hund02701 Selenicereus undatus HOM05D007939 ORTHO05D010027 2.6e-10 68.2 47 66.0
Gohir.A12G276700 Gossypium hirsutum HOM05D007939 ORTHO05D010027 3.3e-10 67.8 45 66.7
Gohir.D12G277700 Gossypium hirsutum HOM05D007939 ORTHO05D010027 3.3e-10 67.8 45 66.7
Gorai.008G298400 Gossypium raimondii HOM05D007939 ORTHO05D010027 3.3e-10 67.8 45 66.7
Phvul.003G196000 Phaseolus vulgaris HOM05D007939 ORTHO05D010027 4.4e-10 67.4 47 63.8
Atru.chr9.2381 Acer truncatum HOM05D007939 ORTHO05D010027 9.7e-10 66.2 47 63.8
ATR0712G037 Amborella trichopoda HOM05D007939 ORTHO05D010027 1.7e-09 65.5 58 55.2
Medtr4g107140 Medicago truncatula HOM05D007939 ORTHO05D010027 1.7e-09 65.5 46 58.7
Nitab4.5_0002101g0080 Nicotiana tabacum HOM05D007939 ORTHO05D010027 1.7e-09 65.5 44 70.5
CAN.G628.63 Capsicum annuum HOM05D007939 ORTHO05D010027 2.2e-09 65.1 46 67.4
Lalb_Chr13g0298021 Lupinus albus HOM05D007939 ORTHO05D010027 3.7e-09 64.3 47 59.6
Solyc06g071260.4 Solanum lycopersicum HOM05D007939 ORTHO05D010027 3.7e-09 64.3 45 66.7
PGSC0003DMG400033058 Solanum tuberosum HOM05D007939 ORTHO05D010027 3.7e-09 64.3 45 66.7
EL10Ac5g10844 Beta vulgaris HOM05D007939 ORTHO05D010027 4.8e-09 63.9 45 64.4
EL10Ac5g10864 Beta vulgaris HOM05D007939 ORTHO05D010027 8.2e-09 63.2 45 62.2
EL10Ac5g11334 Beta vulgaris HOM05D007939 ORTHO05D010027 8.2e-09 63.2 48 60.4
Nitab4.5_0000003g0340 Nicotiana tabacum HOM05D007939 ORTHO05D010027 8.2e-09 63.2 44 68.2
PSO591G0029 Papaver somniferum HOM05D007939 ORTHO05D010027 1.1e-08 62.8 45 66.7
Migut.D01894 Erythranthe guttata HOM05D007939 ORTHO05D010027 4.1e-08 60.8 45 62.2
Zm00001eb302590 Zea mays HOM05D007939 ORTHO05D010027 4.1e-08 60.8 52 59.6
Os03g0824500 Oryza sativa ssp. japonica HOM05D007939 ORTHO05D010027 3.4e-07 57.8 39 66.7
unitig_21.g20455 Utricularia gibba HOM05D002627 ORTHO05D010027 4.5e-07 57.4 52 46.2
QL10p013938 Quercus lobata HOM05D007939 ORTHO05D010027 5.9e-07 57.0 42 59.5
Zm00001eb123900 Zea mays HOM05D007939 ORTHO05D010027 1.7e-06 55.5 40 60.0
Zm00001eb151290 Zea mays HOM05D007939 ORTHO05D010027 1.7e-06 55.5 40 60.0
Peaxi162Scf00689g00418 Petunia axillaris HOM05D007939 ORTHO05D010027 5.0e-06 53.9 52 53.8


User provided reference genes

Program Settings