Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0002863g0050 Nicotiana tabacum HOM05D003329 ORTHO05D011659 4.2e-125 451.4 242 100.0
Nitab4.5_0012245g0060 Nicotiana tabacum HOM05D003329 ORTHO05D011659 4.3e-109 398.3 239 87.0
Nitab4.5_0001155g0050 Nicotiana tabacum HOM05D003329 ORTHO05D011659 3.6e-108 395.2 243 86.8
Nitab4.5_0010453g0010 Nicotiana tabacum HOM05D003329 ORTHO05D011659 6.8e-107 391.0 239 85.8
Nitab4.5_0017647g0020 Nicotiana tabacum HOM05D003329 ORTHO05D011659 1.3e-97 360.1 240 77.5
Nitab4.5_0012182g0020 Nicotiana tabacum HOM05D003329 ORTHO05D011659 6.4e-97 357.8 247 78.5
Nitab4.5_0000587g0060 Nicotiana tabacum HOM05D003329 ORTHO05D011659 2.8e-84 315.8 220 72.7
Nitab4.5_0001360g0130 Nicotiana tabacum HOM05D003329 ORTHO05D011659 2.4e-83 312.8 239 64.0
Nitab4.5_0003251g0070 Nicotiana tabacum HOM05D003329 ORTHO05D011659 7.6e-82 307.8 219 77.6
Nitab4.5_0003152g0050 Nicotiana tabacum HOM05D003329 ORTHO05D011659 2.6e-74 282.7 161 84.5
Nitab4.5_0000105g0220 Nicotiana tabacum HOM05D003329 ORTHO05D011659 8.2e-60 234.6 175 67.4
Nitab4.5_0008743g0020 Nicotiana tabacum HOM05D003329 ORTHO05D015718 8.8e-38 161.4 121 81.0
Nitab4.5_0000164g0170 Nicotiana tabacum HOM05D003329 ORTHO05D011659 1.5e-37 160.6 176 50.0
Nitab4.5_0002695g0120 Nicotiana tabacum HOM05D003329 ORTHO05D000013 2.2e-36 156.8 191 47.1
Peaxi162Scf00839g00021 Petunia axillaris HOM05D003329 ORTHO05D001349 2.6e-29 133.3 246 39.8
Peaxi162Scf00127g00194 Petunia axillaris HOM05D003329 ORTHO05D001349 4.8e-28 129.0 246 39.0
Peaxi162Scf00825g00013 Petunia axillaris HOM05D003329 ORTHO05D001349 4.8e-28 129.0 246 39.0
Nitab4.5_0000239g0120 Nicotiana tabacum HOM05D003329 ORTHO05D001349 2.4e-27 126.7 150 46.0
Nitab4.5_0000073g0190 Nicotiana tabacum HOM05D003329 ORTHO05D006664 9.1e-27 124.8 190 40.5
Nitab4.5_0000417g0030 Nicotiana tabacum HOM05D003329 ORTHO05D006664 1.0e-25 121.3 189 40.2
Nitab4.5_0000712g0110 Nicotiana tabacum HOM05D003329 ORTHO05D011659 2.9e-25 119.8 107 73.8
Nitab4.5_0008974g0020 Nicotiana tabacum HOM05D003329 ORTHO05D006664 6.5e-25 118.6 189 40.7
Nitab4.5_0000189g0190 Nicotiana tabacum HOM05D003329 ORTHO05D011659 1.1e-24 117.9 107 59.8
Nitab4.5_0000381g0260 Nicotiana tabacum HOM05D003329 ORTHO05D006664 1.9e-24 117.1 161 42.9
Nitab4.5_0016516g0020 Nicotiana tabacum HOM05D003329 ORTHO05D006664 7.2e-24 115.2 182 40.7
Nitab4.5_0001615g0150 Nicotiana tabacum HOM05D003329 ORTHO05D011659 9.4e-24 114.8 132 52.3
Nitab4.5_0000965g0050 Nicotiana tabacum HOM05D003329 ORTHO05D006664 1.6e-23 114.0 176 41.5
Nitab4.5_0011168g0020 Nicotiana tabacum HOM05D003329 ORTHO05D006664 1.6e-23 114.0 232 34.5
Nitab4.5_0002026g0170 Nicotiana tabacum HOM05D003329 ORTHO05D006664 2.7e-23 113.2 187 39.6
Nitab4.5_0003484g0030 Nicotiana tabacum HOM05D003329 ORTHO05D006664 6.1e-23 112.1 231 34.6
Nitab4.5_0002149g0020 Nicotiana tabacum HOM05D003329 ORTHO05D006664 8.0e-23 111.7 193 38.9
Nitab4.5_0001759g0100 Nicotiana tabacum HOM05D003329 ORTHO05D006664 5.2e-22 109.0 193 36.8
Nitab4.5_0002980g0070 Nicotiana tabacum HOM05D003329 ORTHO05D006664 8.8e-22 108.2 144 39.6
Nitab4.5_0005116g0020 Nicotiana tabacum HOM05D003329 ORTHO05D006664 8.8e-22 108.2 189 38.1
Nitab4.5_0002918g0120 Nicotiana tabacum HOM05D003329 ORTHO05D006664 2.6e-21 106.7 147 40.8
Peaxi162Scf00802g00125 Petunia axillaris HOM05D003329 ORTHO05D006664 4.4e-21 105.9 98 48.0
Nitab4.5_0000061g0190 Nicotiana tabacum HOM05D003329 ORTHO05D001349 7.5e-21 105.1 134 43.3
Nitab4.5_0008332g0060 Nicotiana tabacum HOM05D003329 ORTHO05D006664 9.8e-21 104.8 176 38.1
Nitab4.5_0000329g0180 Nicotiana tabacum HOM05D003329 ORTHO05D006664 1.3e-20 104.4 155 43.2
Nitab4.5_0000119g0270 Nicotiana tabacum HOM05D003329 ORTHO05D006664 1.7e-20 104.0 151 42.4
Nitab4.5_0002673g0020 Nicotiana tabacum HOM05D003329 ORTHO05D011659 1.4e-19 100.9 107 54.2
Nitab4.5_0002288g0010 Nicotiana tabacum HOM05D003329 ORTHO05D011659 2.7e-18 96.7 105 61.9
Nitab4.5_0001573g0040 Nicotiana tabacum HOM05D003329 ORTHO05D006664 3.5e-18 96.3 162 38.3
Nitab4.5_0006439g0050 Nicotiana tabacum HOM05D003329 ORTHO05D011659 1.7e-17 94.0 108 59.3
PGSC0003DMG400029715 Solanum tuberosum HOM05D003329 ORTHO05D006664 2.9e-17 93.2 100 43.0
Nitab4.5_0001653g0010 Nicotiana tabacum HOM05D003329 ORTHO05D006664 5.0e-17 92.4 238 32.4
Nitab4.5_0000141g0210 Nicotiana tabacum HOM05D003329 ORTHO05D006664 1.9e-16 90.5 108 43.5
Nitab4.5_0001065g0020 Nicotiana tabacum HOM05D003329 ORTHO05D006664 7.2e-16 88.6 193 33.2
Nitab4.5_0000529g0050 Nicotiana tabacum HOM05D003329 ORTHO05D006664 1.6e-15 87.4 194 35.6
Nitab4.5_0000776g0010 Nicotiana tabacum HOM05D003329 ORTHO05D006664 8.0e-15 85.1 190 35.3
Nitab4.5_0009435g0040 Nicotiana tabacum HOM05D003329 ORTHO05D006664 4.0e-14 82.8 120 40.8
Nitab4.5_0001696g0150 Nicotiana tabacum HOM05D003329 ORTHO05D006664 6.8e-14 82.0 161 36.6
CAN.G483.7 Capsicum annuum HOM05D003329 ORTHO05D006664 2.0e-13 80.5 199 29.6
CAN.G113.3 Capsicum annuum HOM05D003329 ORTHO05D006664 4.4e-13 79.3 201 29.4
CAN.G178.9 Capsicum annuum HOM05D003329 ORTHO05D006664 2.2e-12 77.0 187 29.9
Nitab4.5_0000092g0290 Nicotiana tabacum HOM05D003329 ORTHO05D006664 2.2e-12 77.0 151 35.8
Nitab4.5_0003774g0080 Nicotiana tabacum HOM05D003329 ORTHO05D001349 1.8e-11 73.9 76 48.7
Nitab4.5_0000128g0220 Nicotiana tabacum HOM05D003329 ORTHO05D006664 2.4e-11 73.6 74 43.2
Nitab4.5_0001040g0100 Nicotiana tabacum HOM05D003329 ORTHO05D011659 7.0e-11 72.0 128 39.1
Nitab4.5_0002573g0030 Nicotiana tabacum HOM05D003329 ORTHO05D001349 9.2e-11 71.6 76 55.3
Peaxi162Scf00025g02431 Petunia axillaris HOM05D003329 ORTHO05D006664 1.2e-10 71.2 188 29.3
Nitab4.5_0003883g0020 Nicotiana tabacum HOM05D000017 ORTHO05D001349 5.9e-10 68.9 100 30.0
Nitab4.5_0001433g0060 Nicotiana tabacum HOM05D003329 ORTHO05D011659 1.7e-09 67.4 111 41.4
Nitab4.5_0009510g0030 Nicotiana tabacum HOM05D000017 ORTHO05D001349 1.7e-09 67.4 149 26.8
Nitab4.5_0004393g0030 Nicotiana tabacum HOM05D000017 ORTHO05D001349 2.3e-09 67.0 147 29.9
Nitab4.5_0004903g0040 Nicotiana tabacum HOM05D000017 ORTHO05D001349 2.3e-09 67.0 100 30.0
Nitab4.5_0005096g0030 Nicotiana tabacum HOM05D000017 ORTHO05D001349 2.3e-09 67.0 100 31.0
Nitab4.5_0001063g0020 Nicotiana tabacum HOM05D003329 ORTHO05D011659 2.9e-09 66.6 62 71.0
Nitab4.5_0005049g0040 Nicotiana tabacum HOM05D000017 ORTHO05D001349 2.9e-09 66.6 100 30.0
Peaxi162Scf00068g02417 Petunia axillaris HOM05D000017 ORTHO05D030244 2.9e-09 66.6 145 28.3
Nitab4.5_0004685g0040 Nicotiana tabacum HOM05D003329 ORTHO05D006664 3.8e-09 66.2 163 31.3
Nitab4.5_0004921g0050 Nicotiana tabacum HOM05D000017 ORTHO05D001349 3.8e-09 66.2 100 30.0
Nitab4.5_0005650g0050 Nicotiana tabacum HOM05D000017 ORTHO05D001349 3.8e-09 66.2 100 29.0
Nitab4.5_0006309g0070 Nicotiana tabacum HOM05D000017 ORTHO05D001349 5.0e-09 65.9 100 30.0
Nitab4.5_0000901g0040 Nicotiana tabacum HOM05D003329 ORTHO05D006664 8.6e-09 65.1 136 34.6
Nitab4.5_0008371g0050 Nicotiana tabacum HOM05D003329 ORTHO05D001349 8.6e-09 65.1 196 29.1
Nitab4.5_0001819g0090 Nicotiana tabacum HOM05D003329 ORTHO05D011659 1.1e-08 64.7 128 39.1
Nitab4.5_0003167g0020 Nicotiana tabacum HOM05D000017 ORTHO05D001349 1.5e-08 64.3 100 29.0
Nitab4.5_0003332g0020 Nicotiana tabacum HOM05D000017 ORTHO05D001349 1.5e-08 64.3 100 30.0
Nitab4.5_0006039g0020 Nicotiana tabacum HOM05D000017 ORTHO05D001349 4.3e-08 62.8 100 28.0
Nitab4.5_0000140g0020 Nicotiana tabacum HOM05D026398 ORTHO05D286601 5.6e-08 62.4 111 41.4
Nitab4.5_0002477g0060 Nicotiana tabacum HOM05D003329 ORTHO05D006664 5.6e-08 62.4 131 35.9
Nitab4.5_0004956g0010 Nicotiana tabacum HOM05D000017 ORTHO05D001349 9.5e-08 61.6 100 29.0
Nitab4.5_0027825g0010 Nicotiana tabacum HOM05D000017 ORTHO05D001349 9.5e-08 61.6 114 28.1
Peaxi162Scf00174g00315 Petunia axillaris HOM05D003329 ORTHO05D001349 1.6e-07 60.8 166 33.1
Nitab4.5_0022071g0010 Nicotiana tabacum HOM05D003329 ORTHO05D006664 2.8e-07 60.1 130 36.9
Nitab4.5_0000197g0140 Nicotiana tabacum HOM05D008024 ORTHO05D010405 8.0e-07 58.5 108 29.6
CAN.G946.2 Capsicum annuum HOM05D000017 ORTHO05D001349 1.4e-06 57.8 101 29.7
Nitab4.5_0001070g0140 Nicotiana tabacum HOM05D008024 ORTHO05D010405 1.4e-06 57.8 117 29.9
Peaxi162Scf00351g00122 Petunia axillaris HOM05D003329 ORTHO05D006664 1.8e-06 57.4 91 35.2
Sopen04g014920 Solanum pennellii HOM05D000017 ORTHO05D000013 2.3e-06 57.0 174 23.6
Nitab4.5_0009037g0030 Nicotiana tabacum HOM05D000017 ORTHO05D001349 3.0e-06 56.6 100 27.0
Nitab4.5_0011075g0030 Nicotiana tabacum HOM05D008024 ORTHO05D010405 3.0e-06 56.6 117 29.1
Sopen02g011340 Solanum pennellii HOM05D000017 ORTHO05D000013 3.0e-06 56.6 174 23.6
Sopen03g025320 Solanum pennellii HOM05D000017 ORTHO05D000013 3.0e-06 56.6 174 23.6
Sopen06g004260 Solanum pennellii HOM05D000017 ORTHO05D000013 3.0e-06 56.6 174 23.6
Sopen06g014550 Solanum pennellii HOM05D000017 ORTHO05D001349 3.0e-06 56.6 174 23.6
Sopen09g030880 Solanum pennellii HOM05D000017 ORTHO05D000013 3.0e-06 56.6 174 23.6
Sopen10g031980 Solanum pennellii HOM05D000017 ORTHO05D000013 3.0e-06 56.6 174 23.6
Nitab4.5_0009226g0020 Nicotiana tabacum HOM05D003329 ORTHO05D011659 4.0e-06 56.2 66 48.5
Nitab4.5_0000901g0130 Nicotiana tabacum HOM05D000017 ORTHO05D001349 6.8e-06 55.5 91 29.7
Nitab4.5_0000256g0010 Nicotiana tabacum HOM05D008024 ORTHO05D010405 8.9e-06 55.1 95 29.5
Nitab4.5_0022073g0010 Nicotiana tabacum HOM05D000017 ORTHO05D001349 8.9e-06 55.1 100 27.0
Peaxi162Scf00111g01137 Petunia axillaris HOM05D000017 ORTHO05D001349 8.9e-06 55.1 102 27.5


User provided reference genes

Program Settings