Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0002838g0050 Nicotiana tabacum HOM05D007266 ORTHO05D005982 2.2e-199 698.7 347 100.0
Nitab4.5_0004168g0140 Nicotiana tabacum HOM05D007266 ORTHO05D005982 3.6e-178 628.2 345 91.6
PGSC0003DMG402003286 Solanum tuberosum HOM05D007266 ORTHO05D005982 5.5e-134 481.5 354 72.3
Sopen01g040350 Solanum pennellii HOM05D007266 ORTHO05D005982 2.6e-131 472.6 355 71.8
CAN.G134.28 Capsicum annuum HOM05D005009 ORTHO05D006203 1.8e-129 466.5 352 69.0
Peaxi162Scf00220g00314 Petunia axillaris HOM05D007266 ORTHO05D005982 6.6e-79 298.5 205 75.1
Solyc01g096620.4 Solanum lycopersicum HOM05D007266 ORTHO05D005982 2.5e-70 270.0 206 70.4
Peaxi162Scf00220g00313 Petunia axillaris HOM05D007266 ORTHO05D005982 2.4e-52 210.3 142 75.4
Solyc01g096630.3 Solanum lycopersicum HOM05D007266 ORTHO05D005982 6.0e-40 169.1 123 72.4
Oeu013066.1 Olea europaea HOM05D007266 ORTHO05D005982 5.8e-35 152.5 325 36.6
FAN03G0408 Fragaria x ananassa HOM05D007266 ORTHO05D005982 3.0e-31 140.2 356 35.1
Atru.chr12.1311 Acer truncatum HOM05D007266 ORTHO05D005982 5.1e-31 139.4 351 33.0
Sabra01G0022900 Salix brachista HOM05D007266 ORTHO05D005982 6.7e-31 139.0 331 33.2
FvH4_7g03880 Fragaria vesca HOM05D007266 ORTHO05D005982 8.7e-31 138.7 343 34.4
FAN01G0656 Fragaria x ananassa HOM05D007266 ORTHO05D005982 1.1e-30 138.3 354 34.5
FAN06G1886 Fragaria x ananassa HOM05D007266 ORTHO05D005982 1.1e-30 138.3 353 34.0
Oeu058685.1 Olea europaea HOM05D007266 ORTHO05D005982 2.5e-30 137.1 376 34.0
Actinidia01519 Actinidia chinensis HOM05D007266 ORTHO05D005982 5.7e-30 136.0 332 34.6
RcHm_v2.0_Chr1g0327331 Rosa chinensis HOM05D007266 ORTHO05D005982 7.4e-30 135.6 356 34.0
FAN10G1696 Fragaria x ananassa HOM05D007266 ORTHO05D005982 1.3e-29 134.8 352 34.7
Cfa010951 Carpinus fangiana HOM05D007266 ORTHO05D005982 2.2e-29 134.0 364 31.0
Manes.04G156300 Manihot esculenta HOM05D007266 ORTHO05D005982 6.3e-29 132.5 354 32.5
Potri.001G031800 Populus trichocarpa HOM05D007266 ORTHO05D005982 6.3e-29 132.5 278 34.5
CiPaw.06G056200 Carya illinoinensis HOM05D007266 ORTHO05D005982 1.1e-28 131.7 352 33.2
Thecc.10G142300 Theobroma cacao HOM05D007266 ORTHO05D005982 1.1e-28 131.7 337 34.4
Actinidia01687 Actinidia chinensis HOM05D000639 ORTHO05D007519 5.3e-28 129.4 330 35.5
vmacro21145 Vaccinium macrocarpon HOM05D007266 ORTHO05D005982 5.3e-28 129.4 325 35.4
MD07G1043900 Malus domestica HOM05D007266 ORTHO05D005982 2.0e-27 127.5 381 32.0
TAR633G1403 Trochodendron aralioides HOM05D007266 ORTHO05D005982 2.0e-27 127.5 343 32.1
Haze_02992 Corylus avellana HOM05D007266 ORTHO05D005982 2.6e-27 127.1 378 30.4
Rhsim01G0124500 Rhododendron simsii HOM05D007266 ORTHO05D005982 1.7e-26 124.4 367 31.9
CiPaw.14G009500 Carya illinoinensis HOM05D007266 ORTHO05D005982 2.9e-26 123.6 353 32.9
Prupe.2G043600 Prunus persica HOM05D007266 ORTHO05D005982 3.2e-25 120.2 347 33.1
Gorai.009G299100 Gossypium raimondii HOM05D007266 ORTHO05D005982 3.6e-24 116.7 323 30.7
Manes.11G007700 Manihot esculenta HOM05D007266 ORTHO05D005982 3.6e-24 116.7 347 32.0
TWI38G2050 Tripterygium wilfordii HOM05D007266 ORTHO05D005982 1.4e-23 114.8 348 30.2
HanXRQChr05g0146291 Helianthus annuus HOM05D007266 ORTHO05D005982 1.8e-23 114.4 312 34.3
COL.COLO4_06637 Corchorus olitorius HOM05D007266 ORTHO05D005982 2.3e-23 114.0 380 30.3
Hund13391 Selenicereus undatus HOM05D007266 ORTHO05D005982 3.0e-23 113.6 354 31.4
TAR369G0213 Trochodendron aralioides HOM05D007266 ORTHO05D005982 3.0e-23 113.6 361 30.5
PGR044G2654 Punica granatum HOM05D007266 ORTHO05D005982 8.8e-23 112.1 312 31.7
TWI15G1169 Tripterygium wilfordii HOM05D007266 ORTHO05D005982 7.4e-22 109.0 332 31.6
Lj9C658G11 Lonicera japonica HOM05D007266 ORTHO05D005982 9.7e-22 108.6 213 39.4
Hma1.2p1_0837F.1_g226230 Hydrangea macrophylla HOM05D007266 ORTHO05D005982 3.7e-21 106.7 339 30.4
GSVIVG01036604001 Vitis vinifera HOM05D007266 ORTHO05D005982 4.8e-21 106.3 218 36.7
Lsat_1_v5_gn_1_118261 Lactuca sativa HOM05D007266 ORTHO05D005982 6.3e-21 105.9 290 31.7
Gohir.A05G283500 Gossypium hirsutum HOM05D007266 ORTHO05D005982 1.8e-20 104.4 323 28.8
TWI63G1068 Tripterygium wilfordii HOM05D007266 ORTHO05D005982 2.0e-19 100.9 278 32.0
SalBow5G4193 Salvia bowleyana HOM05D007266 ORTHO05D005982 4.5e-19 99.8 310 30.0
Dinv11235 Davidia involucrata HOM05D007266 ORTHO05D005982 1.7e-18 97.8 355 32.1
Duzib128G0414 Durio zibethinus HOM05D007266 ORTHO05D005982 8.5e-18 95.5 332 28.6
ECA248G2125 Erigeron canadensis HOM05D007266 ORTHO05D005982 1.4e-17 94.7 257 30.4
Sabra03G0144500 Salix brachista HOM05D007266 ORTHO05D005982 2.5e-17 94.0 441 25.2
HanXRQChr11g0341241 Helianthus annuus HOM05D007266 ORTHO05D005982 9.4e-17 92.0 215 34.4
CSS0040931 Camellia sinensis var. sinensis HOM05D007266 ORTHO05D005982 6.1e-16 89.4 204 35.8
DCAR_029711 Daucus carota HOM05D007266 ORTHO05D005982 1.0e-15 88.6 345 29.6
FAN03G2213 Fragaria x ananassa HOM05D007266 ORTHO05D005982 1.4e-15 88.2 110 50.0
Potri.003G193800 Populus trichocarpa HOM05D007266 ORTHO05D005982 1.8e-15 87.8 180 33.9
Eucgr.J00068 Eucalyptus grandis HOM05D007266 ORTHO05D005982 3.0e-15 87.0 344 28.2
Migut.B01189 Erythranthe guttata HOM05D007266 ORTHO05D005982 3.9e-15 86.7 320 29.7
arahy.Tifrunner.gnm1.ann1.IJY9PN Arachis hypogaea HOM05D007266 ORTHO05D005982 2.0e-14 84.3 317 27.4
SGA_v2.0_scaffold124G33643 Striga asiatica HOM05D007266 ORTHO05D005982 5.7e-14 82.8 333 29.7
arahy.Tifrunner.gnm1.ann1.78H5KP Arachis hypogaea HOM05D007266 ORTHO05D005982 9.7e-14 82.0 319 27.9
QL04p021455 Quercus lobata HOM05D007266 ORTHO05D005982 2.2e-13 80.9 201 32.3
QL07p029255 Quercus lobata HOM05D007266 ORTHO05D005982 2.2e-13 80.9 201 32.3
Lalb_Chr19g0132921 Lupinus albus HOM05D007266 ORTHO05D005982 4.8e-13 79.7 316 27.8
TPR.G8521 Trifolium pratense HOM05D007266 ORTHO05D005982 8.2e-13 79.0 328 26.5
Thhalv10021314m.g Eutrema salsugineum HOM05D008873 ORTHO05D005982 1.4e-12 78.2 218 32.1
Glyma.04G133400 Glycine max HOM05D007266 ORTHO05D005982 1.4e-12 78.2 331 27.5
Phvul.005G018800 Phaseolus vulgaris HOM05D007266 ORTHO05D005982 1.8e-12 77.8 331 26.6
Lj3g0024959 Lotus japonicus HOM05D007266 ORTHO05D005982 2.4e-12 77.4 322 28.3
Aa31LG3G6540 Aethionema arabicum HOM05D008873 ORTHO05D005982 3.1e-12 77.0 339 28.0
Ca_24011_v3 Cicer arietinum L. HOM05D007266 ORTHO05D005982 4.1e-12 76.6 329 27.1
Ca_24018_v3 Cicer arietinum L. HOM05D007266 ORTHO05D005982 4.1e-12 76.6 329 27.1
Gohir.D05G284500 Gossypium hirsutum HOM05D007266 ORTHO05D005982 4.1e-12 76.6 96 45.8
arahy.Tifrunner.gnm1.ann1.E0LNSJ Arachis hypogaea HOM05D007266 ORTHO05D005982 5.3e-12 76.3 367 25.9
VMungo1080G1603 Vigna mungo HOM05D007266 ORTHO05D005982 5.3e-12 76.3 333 27.0
AUR62031740 Chenopodium quinoa HOM05D007266 ORTHO05D005982 7.0e-12 75.9 358 26.3
CANSAT56G2989 Cannabis sativa HOM05D007266 ORTHO05D005982 9.1e-12 75.5 335 28.4
Glyma.13G191900 Glycine max HOM05D007266 ORTHO05D005982 9.1e-12 75.5 327 29.1
Nn7g36823 Nelumbo nucifera HOM05D007266 ORTHO05D005982 9.1e-12 75.5 350 26.9
Sp6g35890 Schrenkiella parvula HOM05D008873 ORTHO05D005982 1.2e-11 75.1 322 29.5
Cpa.g.sc169.34 Carica papaya HOM05D007266 ORTHO05D005982 1.5e-11 74.7 425 24.7
Psat4g144600 Pisum sativum HOM05D007266 ORTHO05D005982 2.0e-11 74.3 318 26.4
Medtr8g040640 Medicago truncatula HOM05D007266 ORTHO05D005982 3.5e-11 73.6 338 26.6
EL10Ac2g02761 Beta vulgaris HOM05D007266 ORTHO05D005982 5.9e-11 72.8 339 28.0
Thhalv10014291m.g Eutrema salsugineum HOM05D008873 ORTHO05D005982 7.7e-11 72.4 314 28.3
Carub.0006s0591 Capsella rubella HOM05D008873 ORTHO05D005982 1.0e-10 72.0 322 27.6
BcaB04g21084 Brassica carinata HOM05D008873 ORTHO05D005982 2.2e-10 70.9 217 29.5
BcaB04g21086 Brassica carinata HOM05D008873 ORTHO05D005982 2.2e-10 70.9 217 29.5
Glyma.11G158200 Glycine max HOM05D007266 ORTHO05D005982 2.2e-10 70.9 228 27.6
CARHR206160 Cardamine hirsuta HOM05D008873 ORTHO05D005982 2.9e-10 70.5 84 44.0
PSO135G0681 Papaver somniferum HOM05D007266 ORTHO05D005982 2.9e-10 70.5 221 28.1
VMungo1127G1999 Vigna mungo HOM05D007266 ORTHO05D005982 2.9e-10 70.5 366 26.2
C05p55490 Brassica napus HOM05D008873 ORTHO05D005982 3.8e-10 70.1 226 31.4
Carub.0003s1168 Capsella rubella HOM05D008873 ORTHO05D005982 6.5e-10 69.3 217 30.4
CARHR086860 Cardamine hirsuta HOM05D008873 ORTHO05D005982 6.5e-10 69.3 217 30.9
BcaC01g04052 Brassica carinata HOM05D008873 ORTHO05D005982 8.5e-10 68.9 219 27.9
A05p37060 Brassica napus HOM05D008873 ORTHO05D005982 8.5e-10 68.9 226 31.9
A10p28780 Brassica napus HOM05D008873 ORTHO05D005982 8.5e-10 68.9 319 27.6
C03p45590 Brassica napus HOM05D008873 ORTHO05D005982 8.5e-10 68.9 219 27.9
BolC3t16836H Brassica oleracea HOM05D008873 ORTHO05D005982 8.5e-10 68.9 219 27.9
BraA10t44925Z Brassica rapa HOM05D008873 ORTHO05D005982 8.5e-10 68.9 319 27.6
Ciclev10001901m.g Citrus clementina HOM05D007266 ORTHO05D005982 8.5e-10 68.9 288 27.1
Sp3g10530 Schrenkiella parvula HOM05D008873 ORTHO05D005982 8.5e-10 68.9 213 29.6
AL6G17140 Arabidopsis lyrata HOM05D008873 ORTHO05D005982 1.1e-09 68.6 311 27.3
BcaC06g32527 Brassica carinata HOM05D008873 ORTHO05D005982 1.1e-09 68.6 320 29.4
A03p37600 Brassica napus HOM05D008873 ORTHO05D005982 1.1e-09 68.6 219 28.3
AUR62032625 Chenopodium quinoa HOM05D007266 ORTHO05D005982 1.5e-09 68.2 218 31.2
Dinv32008 Davidia involucrata HOM05D007266 ORTHO05D005982 1.5e-09 68.2 194 29.9
BcaB04g18684 Brassica carinata HOM05D008873 ORTHO05D005982 1.9e-09 67.8 135 36.3
QL04p021458 Quercus lobata HOM05D007266 ORTHO05D005982 1.9e-09 67.8 98 43.9
QL07p029253 Quercus lobata HOM05D007266 ORTHO05D005982 1.9e-09 67.8 98 43.9
Ah.12g065060 Amaranthus hybridus HOM05D007266 ORTHO05D005982 2.5e-09 67.4 327 28.4
C09p69120 Brassica napus HOM05D008873 ORTHO05D005982 2.5e-09 67.4 317 27.8
BolC9t59656H Brassica oleracea HOM05D008873 ORTHO05D005982 2.5e-09 67.4 317 27.8
Glyma.15G229400 Glycine max HOM05D007266 ORTHO05D005982 2.5e-09 67.4 344 27.3
Phvul.011G200200 Phaseolus vulgaris HOM05D007266 ORTHO05D005982 2.5e-09 67.4 337 25.5
BcaNung04207 Brassica carinata HOM05D008873 ORTHO05D005982 3.2e-09 67.0 207 32.4
BraA03t12914Z Brassica rapa HOM05D008873 ORTHO05D005982 3.2e-09 67.0 219 28.3
Ah.10g030010 Amaranthus hybridus HOM05D007266 ORTHO05D005982 4.2e-09 66.6 317 26.8
arahy.Tifrunner.gnm1.ann1.5HCQ47 Arachis hypogaea HOM05D007266 ORTHO05D005982 4.2e-09 66.6 354 26.8
THA.LOC104799328 Tarenaya hassleriana HOM05D008873 ORTHO05D005982 4.2e-09 66.6 309 29.4
AT3G12320 Arabidopsis thaliana HOM05D008873 ORTHO05D005982 5.5e-09 66.2 217 30.9
BcaC05g29270 Brassica carinata HOM05D008873 ORTHO05D005982 9.4e-09 65.5 226 30.5
AL3G23970 Arabidopsis lyrata HOM05D008873 ORTHO05D005982 1.2e-08 65.1 123 39.0
PSO384G1467 Papaver somniferum HOM05D007266 ORTHO05D005982 1.6e-08 64.7 221 26.7
MBI13_g09214_MAGBIO Magnolia biondii HOM05D007266 ORTHO05D005982 8.0e-08 62.4 310 23.2
BraA05t22503Z Brassica rapa HOM05D008873 ORTHO05D005982 1.4e-07 61.6 285 26.3
BolC5t34215H Brassica oleracea HOM05D008873 ORTHO05D005982 6.7e-07 59.3 174 32.2
BcaB01g05709 Brassica carinata HOM05D008873 ORTHO05D005982 2.0e-06 57.8 171 31.0
Cpa.g.sc223.14 Carica papaya HOM05D004414 ORTHO05D001824 2.6e-06 57.4 137 32.8
Lalb_Chr01g0007431 Lupinus albus HOM05D007266 ORTHO05D005982 2.6e-06 57.4 92 39.1
Aa31sc25G30 Aethionema arabicum HOM05D008873 ORTHO05D005982 7.5e-06 55.8 81 39.5
CSS0028207 Camellia sinensis var. sinensis HOM05D004414 ORTHO05D001824 7.5e-06 55.8 117 35.0


User provided reference genes

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