Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0002838g0030 Nicotiana tabacum HOM05D005878 ORTHO05D007433 1.3e-116 423.3 250 100.0
Nitab4.5_0004168g0090 Nicotiana tabacum HOM05D005878 ORTHO05D007433 1.3e-105 386.7 250 88.4
PGSC0003DMG400003288 Solanum tuberosum HOM05D005878 ORTHO05D007433 1.9e-99 366.3 251 83.3
Solyc01g096660.3 Solanum lycopersicum HOM05D005878 ORTHO05D007433 3.2e-99 365.5 251 82.5
Sopen01g040380 Solanum pennellii HOM05D005878 ORTHO05D007433 5.4e-99 364.8 251 82.1
Peaxi162Scf00220g00235 Petunia axillaris HOM05D005878 ORTHO05D007433 1.1e-83 313.9 255 78.0
arahy.Tifrunner.gnm1.ann1.RJ91AH Arachis hypogaea HOM05D005878 ORTHO05D007433 2.9e-68 262.7 245 62.4
arahy.Tifrunner.gnm1.ann1.7Y8XE1 Arachis hypogaea HOM05D005878 ORTHO05D007433 3.8e-68 262.3 199 71.4
Cc00_g09800 Coffea canephora HOM05D005878 ORTHO05D007433 3.2e-67 259.2 249 62.7
Oeu006783.1 Olea europaea HOM05D005878 ORTHO05D007433 9.3e-67 257.7 250 63.2
Hund13399 Selenicereus undatus HOM05D005878 ORTHO05D007433 2.1e-66 256.5 200 71.5
Dinv02557 Davidia involucrata HOM05D005878 ORTHO05D007433 1.5e-64 250.4 249 60.6
Gohir.A05G398900 Gossypium hirsutum HOM05D005878 ORTHO05D007433 1.5e-64 250.4 244 59.8
Gorai.012G019700 Gossypium raimondii HOM05D005878 ORTHO05D007433 1.5e-64 250.4 244 60.2
Gohir.D04G017000 Gossypium hirsutum HOM05D005878 ORTHO05D007433 4.3e-64 248.8 244 59.8
Phvul.005G018300 Phaseolus vulgaris HOM05D005878 ORTHO05D007433 4.3e-64 248.8 203 70.4
Actinidia01690 Actinidia chinensis HOM05D005878 ORTHO05D007433 1.6e-63 246.9 248 62.5
COL.COLO4_05616 Corchorus olitorius HOM05D005878 ORTHO05D007433 1.6e-63 246.9 250 59.2
VMungo1080G0593 Vigna mungo HOM05D005878 ORTHO05D007433 1.6e-63 246.9 203 69.5
Aqoxy2G00498 Aquilegia oxysepala HOM05D005878 ORTHO05D007433 2.8e-63 246.1 248 59.7
TAR633G2731 Trochodendron aralioides HOM05D005878 ORTHO05D007433 3.7e-63 245.7 255 57.6
Glyma.06G309000 Glycine max HOM05D005878 ORTHO05D007433 4.8e-63 245.4 196 70.9
Dinv32002 Davidia involucrata HOM05D005878 ORTHO05D007433 6.2e-63 245.0 196 71.4
Nn7g36933 Nelumbo nucifera HOM05D005878 ORTHO05D007433 6.2e-63 245.0 243 60.9
QL04p021553 Quercus lobata HOM05D005878 ORTHO05D007433 6.2e-63 245.0 249 55.8
TWI38G1150 Tripterygium wilfordii HOM05D005878 ORTHO05D007433 6.2e-63 245.0 200 70.0
SalBow2G2419 Salvia bowleyana HOM05D005878 ORTHO05D007433 8.1e-63 244.6 194 71.6
Thecc.10G140600 Theobroma cacao HOM05D005878 ORTHO05D007433 8.1e-63 244.6 250 58.0
CiPaw.14G010200 Carya illinoinensis HOM05D005878 ORTHO05D007433 1.1e-62 244.2 240 60.4
Lalb_Chr01g0007451 Lupinus albus HOM05D005878 ORTHO05D007433 1.1e-62 244.2 192 70.8
SalBow2G0433 Salvia bowleyana HOM05D005878 ORTHO05D007433 1.1e-62 244.2 194 71.6
Actinidia01520 Actinidia chinensis HOM05D005878 ORTHO05D007433 1.8e-62 243.4 254 59.1
Duzib114G0830 Durio zibethinus HOM05D005878 ORTHO05D007433 2.4e-62 243.0 236 59.3
MBI03_g46805_MAGBIO Magnolia biondii HOM05D005878 ORTHO05D007433 3.1e-62 242.7 203 65.0
MBI03_g45113_MAGBIO Magnolia biondii HOM05D005878 ORTHO05D007433 5.3e-62 241.9 203 65.0
Migut.B01182 Erythranthe guttata HOM05D005878 ORTHO05D007433 6.9e-62 241.5 248 59.7
Glyma.04G132400 Glycine max HOM05D005878 ORTHO05D007433 1.2e-61 240.7 196 69.9
Medtr3g013460 Medicago truncatula HOM05D005878 ORTHO05D007433 1.5e-61 240.4 200 70.0
EL10Ac2g02748 Beta vulgaris HOM05D005878 ORTHO05D007433 2.0e-61 240.0 200 66.0
FAN01G0732 Fragaria x ananassa HOM05D005878 ORTHO05D007433 2.0e-61 240.0 163 77.9
AT5G07020 Arabidopsis thaliana HOM05D005878 ORTHO05D007433 3.4e-61 239.2 158 77.2
Ciclev10002378m.g Citrus clementina HOM05D005878 ORTHO05D007433 3.4e-61 239.2 248 56.5
Cfa010961 Carpinus fangiana HOM05D005878 ORTHO05D007433 4.5e-61 238.8 249 59.0
Thhalv10014567m.g Eutrema salsugineum HOM05D005878 ORTHO05D007433 4.5e-61 238.8 202 67.3
DCAR_006594 Daucus carota HOM05D005878 ORTHO05D007433 7.6e-61 238.0 206 64.1
Prupe.2G044200 Prunus persica HOM05D005878 ORTHO05D007433 7.6e-61 238.0 233 60.5
FAN06G2676 Fragaria x ananassa HOM05D005878 ORTHO05D007433 1.7e-60 236.9 152 80.3
AL6G17170 Arabidopsis lyrata HOM05D005878 ORTHO05D007433 2.2e-60 236.5 199 68.3
Carub.0006s0594 Capsella rubella HOM05D005878 ORTHO05D007433 2.2e-60 236.5 170 73.5
Sp6g35860 Schrenkiella parvula HOM05D005878 ORTHO05D007433 2.2e-60 236.5 202 66.3
TWI15G0528 Tripterygium wilfordii HOM05D005878 ORTHO05D007433 2.2e-60 236.5 186 69.4
BraA10t44928Z Brassica rapa HOM05D005878 ORTHO05D007433 2.9e-60 236.1 200 66.5
THA.LOC104799332 Tarenaya hassleriana HOM05D005878 ORTHO05D007433 2.9e-60 236.1 246 58.1
MD00G1152600 Malus domestica HOM05D005878 ORTHO05D007433 3.8e-60 235.7 249 59.4
A10p28810 Brassica napus HOM05D005878 ORTHO05D007433 6.5e-60 235.0 200 66.0
RcHm_v2.0_Chr1g0327631 Rosa chinensis HOM05D005878 ORTHO05D007433 6.5e-60 235.0 233 60.9
BcaC06g32524 Brassica carinata HOM05D005878 ORTHO05D007433 1.1e-59 234.2 249 57.0
MD07G1043600 Malus domestica HOM05D005878 ORTHO05D007433 1.1e-59 234.2 245 58.4
BcaB05g21633 Brassica carinata HOM05D005878 ORTHO05D007433 1.4e-59 233.8 250 56.8
FvH4_7g03940 Fragaria vesca HOM05D005878 ORTHO05D007433 1.4e-59 233.8 152 79.6
CANSAT01G2833 Cannabis sativa HOM05D005878 ORTHO05D007433 1.9e-59 233.4 256 58.2
CARHR206130 Cardamine hirsuta HOM05D005878 ORTHO05D007433 1.9e-59 233.4 151 79.5
Manes.11G008200 Manihot esculenta HOM05D005878 ORTHO05D007433 1.9e-59 233.4 198 66.2
PGR031G0581 Punica granatum HOM05D005878 ORTHO05D007433 1.9e-59 233.4 245 58.8
ATR1136G020 Amborella trichopoda HOM05D005878 ORTHO05D007433 2.5e-59 233.0 174 68.4
HanXRQChr11g0341301 Helianthus annuus HOM05D005878 ORTHO05D007433 3.2e-59 232.6 199 66.3
Ca_14245_v3 Cicer arietinum L. HOM05D005878 ORTHO05D007433 5.5e-59 231.9 205 67.3
Lsat_1_v5_gn_9_74980 Lactuca sativa HOM05D005878 ORTHO05D007433 7.1e-59 231.5 247 59.1
Lj3g0011478 Lotus japonicus HOM05D005878 ORTHO05D007433 7.1e-59 231.5 203 66.5
MSTRG.16973 Avicennia marina HOM05D005878 ORTHO05D007433 1.2e-58 230.7 251 58.2
BcaNung04204 Brassica carinata HOM05D005878 ORTHO05D007433 1.2e-58 230.7 249 56.2
C09p69150 Brassica napus HOM05D005878 ORTHO05D007433 1.2e-58 230.7 249 56.2
Haze_02979 Corylus avellana HOM05D005878 ORTHO05D007433 1.6e-58 230.3 261 56.3
BcaB05g21635 Brassica carinata HOM05D005878 ORTHO05D007433 2.1e-58 229.9 200 65.0
BcaC03g13174 Brassica carinata HOM05D005878 ORTHO05D007433 2.1e-58 229.9 200 65.0
BolC2t06258H Brassica oleracea HOM05D005878 ORTHO05D007433 2.1e-58 229.9 200 65.0
BolC9t59659H Brassica oleracea HOM05D005878 ORTHO05D007433 3.5e-58 229.2 249 55.8
CSS0046372 Camellia sinensis var. sinensis HOM05D005878 ORTHO05D007433 3.5e-58 229.2 197 65.0
TAR636G2836 Trochodendron aralioides HOM05D005878 ORTHO05D007433 3.5e-58 229.2 201 66.2
C02p02970 Brassica napus HOM05D005878 ORTHO05D007433 6.0e-58 228.4 249 55.8
CsaV3_5G036960 Cucumis sativus L. HOM05D005878 ORTHO05D007433 1.0e-57 227.6 199 63.8
ClCG05G027000 Citrullus lanatus HOM05D005878 ORTHO05D007433 3.0e-57 226.1 199 64.3
MELO3C012494.2 Cucumis melo HOM05D005878 ORTHO05D007433 3.0e-57 226.1 190 66.3
PSO339G1146 Papaver somniferum HOM05D005878 ORTHO05D007433 3.9e-57 225.7 193 63.7
GSVIVG01036595001 Vitis vinifera HOM05D005878 ORTHO05D007433 3.9e-57 225.7 191 67.5
ECA248G2695 Erigeron canadensis HOM05D005878 ORTHO05D007433 6.7e-57 224.9 199 61.8
Eucgr.G03205 Eucalyptus grandis HOM05D005878 ORTHO05D007433 1.1e-56 224.2 253 55.3
Sed0004070 Sechium edule HOM05D005878 ORTHO05D007433 3.3e-56 222.6 201 61.7
unitig_22.g5332 Utricularia gibba HOM05D005878 ORTHO05D007433 4.3e-56 222.2 260 55.8
AUR62032609 Chenopodium quinoa HOM05D005878 ORTHO05D007433 9.6e-56 221.1 246 61.8
PSO384G4469 Papaver somniferum HOM05D005878 ORTHO05D007433 9.6e-56 221.1 193 63.2
Rhsim10G0180100 Rhododendron simsii HOM05D005878 ORTHO05D007433 1.3e-55 220.7 208 60.1
Sc14g0005230 Simmondsia chinensis HOM05D005878 ORTHO05D007433 1.1e-54 217.6 188 67.0
HPP92_016121 Vanilla planifolia HOM05D005878 ORTHO05D007433 1.8e-54 216.9 236 53.8
Potri.003G192800 Populus trichocarpa HOM05D005878 ORTHO05D007433 6.9e-54 214.9 235 56.2
BraA02t04902Z Brassica rapa HOM05D005878 ORTHO05D007433 7.6e-53 211.5 210 57.6
vmacro20585 Vaccinium macrocarpon HOM05D005878 ORTHO05D007433 2.2e-52 209.9 270 51.1
Aa31sc25G160 Aethionema arabicum HOM05D005878 ORTHO05D007433 8.5e-52 208.0 137 75.9
Os02g0556800 Oryza sativa ssp. japonica HOM05D005878 ORTHO05D007433 2.3e-49 199.9 147 68.0
Lj9A656G41 Lonicera japonica HOM05D005878 ORTHO05D007433 3.3e-48 196.1 130 77.7
CDE02G0435 Ceratophyllum demersum HOM05D005878 ORTHO05D007433 4.3e-48 195.7 198 58.1
Zm00001eb182020 Zea mays HOM05D005878 ORTHO05D007433 4.3e-48 195.7 145 68.3
FAN03G0529 Fragaria x ananassa HOM05D005878 ORTHO05D007433 7.4e-48 194.9 212 56.1
CDE08G0208 Ceratophyllum demersum HOM05D005878 ORTHO05D007433 1.3e-47 194.1 246 50.8
SGA_v2.0_scaffold430G51553 Striga asiatica HOM05D005878 ORTHO05D007433 2.8e-47 193.0 138 73.2
TPR.G1450 Trifolium pratense HOM05D005878 ORTHO05D007433 2.8e-47 193.0 129 79.1
Cpa.g.sc188.4 Carica papaya HOM05D005878 ORTHO05D007433 1.8e-46 190.3 117 82.1
Hma1.2p1_0233F.1_g098360 Hydrangea macrophylla HOM05D005878 ORTHO05D007433 2.4e-46 189.9 127 72.4
AUR62001069 Chenopodium quinoa HOM05D005878 ORTHO05D007433 6.9e-46 188.3 128 74.2
Atru.chr12.1246 Acer truncatum HOM05D005878 ORTHO05D007433 2.0e-45 186.8 239 54.4
SEGI_13955 Sequoiadendron giganteum HOM05D005878 ORTHO05D007433 1.3e-44 184.1 200 52.5
AagrBONN_evm.TU.Sc2ySwM_117.450 Anthoceros agrestis HOM05D005878 ORTHO05D007433 9.4e-43 177.9 158 57.0
AagrBONN_evm.TU.Sc2ySwM_117.1283 Anthoceros agrestis HOM05D005878 ORTHO05D007433 6.1e-42 175.3 200 52.5
Pp3c8_5370 Physcomitrium patens HOM05D005878 ORTHO05D007433 7.9e-42 174.9 164 57.9
A03p56860 Brassica napus HOM05D005878 ORTHO05D007433 8.8e-41 171.4 130 70.8
Mapoly0116s0014 Marchantia polymorpha HOM05D005878 ORTHO05D007433 2.8e-39 166.4 197 48.7
Psat5g223120 Pisum sativum HOM05D005878 ORTHO05D007433 3.7e-39 166.0 204 54.9
Hma1.2p1_0233F.1_g098370 Hydrangea macrophylla HOM05D005878 ORTHO05D007433 1.1e-38 164.5 110 73.6
Pp3c3_32790 Physcomitrium patens HOM05D005878 ORTHO05D007433 4.1e-38 162.5 196 48.5
SMO143G0125 Selaginella moellendorffii HOM05D005878 ORTHO05D007433 1.1e-35 154.5 199 49.7
AUR62031722 Chenopodium quinoa HOM05D005878 ORTHO05D007433 2.3e-25 120.2 161 46.6
TAR628G0990 Trochodendron aralioides HOM05D005878 ORTHO05D007433 2.3e-25 120.2 183 44.8
BcaC03g13176 Brassica carinata HOM05D005878 ORTHO05D007433 8.8e-25 118.2 112 58.9
Eucgr.L03611 Eucalyptus grandis HOM05D005878 ORTHO05D007433 1.2e-24 117.9 115 59.1
Atru.chr2.3038 Acer truncatum HOM05D005878 ORTHO05D007433 3.5e-21 106.3 100 62.0
CBR_g50344 Chara braunii HOM05D005878 ORTHO05D007433 1.8e-17 94.0 226 34.5
Atru.chr3.2623 Acer truncatum HOM05D005878 ORTHO05D007433 8.8e-17 91.7 83 65.1
Atru.chr7.1915 Acer truncatum HOM05D005878 ORTHO05D007433 9.8e-16 88.2 105 50.5
PGSC0003DMG400040390 Solanum tuberosum HOM05D005878 ORTHO05D007433 2.7e-13 80.1 96 62.5
Potri.001G032200 Populus trichocarpa HOM05D005878 ORTHO05D007433 9.5e-11 71.6 243 34.2
BolC7t45992H Brassica oleracea HOM05D005878 ORTHO05D033170 1.1e-06 58.2 52 75.0
C07p55210 Brassica napus HOM05D005878 ORTHO05D033170 3.1e-06 56.6 50 70.0


User provided reference genes

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