Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0002837g0070 Nicotiana tabacum HOM05D009060 ORTHO05D011398 3.8e-73 278.1 141 100.0
Nitab4.5_0001334g0050 Nicotiana tabacum HOM05D009060 ORTHO05D011398 9.3e-64 246.9 130 91.5
Nitab4.5_0002516g0030 Nicotiana tabacum HOM05D009060 ORTHO05D011398 1.6e-47 193.0 106 89.6
Nitab4.5_0006479g0040 Nicotiana tabacum HOM05D009060 ORTHO05D011398 3.9e-46 188.3 151 70.2
Nitab4.5_0002792g0030 Nicotiana tabacum HOM05D009060 ORTHO05D011398 1.9e-45 186.0 151 62.3
Nitab4.5_0000045g0210 Nicotiana tabacum HOM05D009060 ORTHO05D011398 4.0e-43 178.3 116 71.6
Nitab4.5_0004872g0030 Nicotiana tabacum HOM05D009060 ORTHO05D011398 5.8e-42 174.5 140 64.3
Nitab4.5_0000559g0270 Nicotiana tabacum HOM05D009060 ORTHO05D011398 8.4e-41 170.6 103 76.7
Nitab4.5_0000855g0070 Nicotiana tabacum HOM05D009060 ORTHO05D011398 8.7e-38 160.6 124 62.1
Peaxi162Scf00334g00126 Petunia axillaris HOM05D009060 ORTHO05D011398 4.4e-21 105.1 135 40.7
Sopen03g023750 Solanum pennellii HOM05D000030 ORTHO05D000009 2.0e-18 96.3 77 55.8
Nitab4.5_0000376g0060 Nicotiana tabacum HOM05D009060 ORTHO05D011398 5.9e-18 94.7 53 73.6
Solyc09g063157.2 Solanum lycopersicum HOM05D000030 ORTHO05D000009 1.3e-17 93.6 77 66.2
Sopen01g026300 Solanum pennellii HOM05D000030 ORTHO05D000009 1.3e-17 93.6 77 66.2
Sopen11g012600 Solanum pennellii HOM05D000030 ORTHO05D000009 1.3e-17 93.6 77 66.2
Solyc11g150102.1 Solanum lycopersicum HOM05D000030 ORTHO05D000009 1.7e-17 93.2 77 59.7
Nitab4.5_0006088g0060 Nicotiana tabacum HOM05D009060 ORTHO05D011398 5.0e-17 91.7 56 69.6
Nitab4.5_0000072g0380 Nicotiana tabacum HOM05D009060 ORTHO05D011398 8.5e-17 90.9 53 73.6
Sopen03g009380 Solanum pennellii HOM05D000030 ORTHO05D000009 8.5e-17 90.9 77 53.2
PGSC0003DMG400042476 Solanum tuberosum HOM05D009060 ORTHO05D011398 1.0e-14 84.0 77 51.9
PGSC0003DMG400016410 Solanum tuberosum HOM05D000030 ORTHO05D000009 5.7e-13 78.2 131 35.1
Nitab4.5_0022785g0010 Nicotiana tabacum HOM05D009060 ORTHO05D011398 7.4e-13 77.8 106 42.5
Nitab4.5_0004648g0020 Nicotiana tabacum HOM05D009060 ORTHO05D011398 1.7e-12 76.6 31 96.8
Nitab4.5_0024064g0010 Nicotiana tabacum HOM05D009060 ORTHO05D011398 1.7e-12 76.6 42 71.4
Nitab4.5_0001298g0080 Nicotiana tabacum HOM05D009060 ORTHO05D011398 3.7e-12 75.5 56 62.5
Sopen10g022460 Solanum pennellii HOM05D000030 ORTHO05D000009 7.0e-11 71.2 76 47.4
Sopen07g007410 Solanum pennellii HOM05D000030 ORTHO05D000009 2.0e-10 69.7 76 47.4
Nitab4.5_0005833g0010 Nicotiana tabacum HOM05D003038 ORTHO05D003514 1.7e-09 66.6 29 89.7
Nitab4.5_0008198g0050 Nicotiana tabacum HOM05D009060 ORTHO05D011398 6.5e-09 64.7 77 45.5
Sopen12g016160 Solanum pennellii HOM05D000030 ORTHO05D000009 4.2e-08 62.0 39 59.0
Sopen01g017090 Solanum pennellii HOM05D000030 ORTHO05D000009 5.5e-08 61.6 61 39.3
Sopen08g019750 Solanum pennellii HOM05D000030 ORTHO05D000009 7.2e-08 61.2 58 46.6
Hma1.2p1_0284F.1_g113810 Hydrangea macrophylla HOM05D000030 ORTHO05D000009 2.1e-07 59.7 110 32.7
Solyc11g150103.1 Solanum lycopersicum HOM05D009060 ORTHO05D011398 2.7e-07 59.3 51 45.1
Solyc11g150144.1 Solanum lycopersicum HOM05D009060 ORTHO05D011398 3.6e-07 58.9 51 45.1
Solyc12g021265.1 Solanum lycopersicum HOM05D009060 ORTHO05D011398 3.6e-07 58.9 51 45.1
Manes.01G057350 Manihot esculenta HOM05D000030 ORTHO05D000009 6.1e-07 58.2 75 37.3
Solyc07g049405.1 Solanum lycopersicum HOM05D000030 ORTHO05D000009 6.1e-07 58.2 38 55.3
Nitab4.5_0000133g0040 Nicotiana tabacum HOM05D009060 ORTHO05D011398 1.0e-06 57.4 78 42.3
Manes.17G003183 Manihot esculenta HOM05D000030 ORTHO05D000009 1.4e-06 57.0 48 45.8
Solyc11g150101.1 Solanum lycopersicum HOM05D009060 ORTHO05D011398 1.4e-06 57.0 51 43.1
Solyc01g058593.1 Solanum lycopersicum HOM05D009060 ORTHO05D011398 1.8e-06 56.6 60 41.7
Manes.02G223133 Manihot esculenta HOM05D000030 ORTHO05D000009 3.0e-06 55.8 75 34.7
Manes.02G223166 Manihot esculenta HOM05D000030 ORTHO05D000009 3.0e-06 55.8 75 34.7
Manes.12G071950 Manihot esculenta HOM05D000030 ORTHO05D000009 3.0e-06 55.8 75 34.7
Manes.16G104301 Manihot esculenta HOM05D000030 ORTHO05D000009 3.0e-06 55.8 75 34.7
Nitab4.5_0003152g0080 Nicotiana tabacum HOM05D014912 ORTHO05D011398 3.0e-06 55.8 68 45.6
Hma1.2p1_1137F.1_g260640 Hydrangea macrophylla HOM05D000030 ORTHO05D000009 4.0e-06 55.5 41 46.3
Hma1.2p1_1689F.1_g297600 Hydrangea macrophylla HOM05D000030 ORTHO05D000009 4.0e-06 55.5 41 53.7
Manes.02G168901 Manihot esculenta HOM05D000030 ORTHO05D000009 4.0e-06 55.5 69 37.7
Manes.03G090703 Manihot esculenta HOM05D000030 ORTHO05D000009 4.0e-06 55.5 45 46.7
Manes.11G097150 Manihot esculenta HOM05D000030 ORTHO05D000031 4.0e-06 55.5 79 41.8
Manes.13G091744 Manihot esculenta HOM05D000030 ORTHO05D000009 4.0e-06 55.5 48 43.8
Manes.14G165250 Manihot esculenta HOM05D000030 ORTHO05D000009 4.0e-06 55.5 44 47.7
Manes.06G026760 Manihot esculenta HOM05D000030 ORTHO05D000009 5.2e-06 55.1 79 34.2
Manes.13G119650 Manihot esculenta HOM05D000030 ORTHO05D000009 5.2e-06 55.1 69 36.2
Manes.17G029905 Manihot esculenta HOM05D000030 ORTHO05D000009 5.2e-06 55.1 45 44.4
Nitab4.5_0002608g0010 Nicotiana tabacum HOM05D014912 ORTHO05D011398 5.2e-06 55.1 68 44.1
QL09p036938 Quercus lobata HOM05D000030 ORTHO05D000009 5.2e-06 55.1 70 38.6
Sopen12g008930 Solanum pennellii HOM05D000030 ORTHO05D000009 5.2e-06 55.1 77 39.0
Manes.13G073701 Manihot esculenta HOM05D000030 ORTHO05D000009 6.7e-06 54.7 48 45.8
Manes.18G145766 Manihot esculenta HOM05D000030 ORTHO05D000009 8.8e-06 54.3 44 45.5
QL04p087373 Quercus lobata HOM05D000030 ORTHO05D000009 8.8e-06 54.3 70 38.6
QL06p050254 Quercus lobata HOM05D000030 ORTHO05D000009 8.8e-06 54.3 106 29.2
QL08p060040 Quercus lobata HOM05D000030 ORTHO05D000009 8.8e-06 54.3 70 38.6
QL09p032347 Quercus lobata HOM05D000030 ORTHO05D000009 8.8e-06 54.3 70 38.6
QL10p060035 Quercus lobata HOM05D000030 ORTHO05D000009 8.8e-06 54.3 70 38.6
Solyc05g045957.1 Solanum lycopersicum HOM05D009060 ORTHO05D011398 8.8e-06 54.3 51 43.1


User provided reference genes

Program Settings