Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0002832g0050 Nicotiana tabacum HOM05D003751 ORTHO05D004765 2.5e-75 286.6 332 100.0
Nitab4.5_0000720g0010 Nicotiana tabacum HOM05D003751 ORTHO05D004765 3.6e-74 282.7 332 99.4
PGSC0003DMG400004190 Solanum tuberosum HOM05D003751 ORTHO05D004765 7.0e-70 268.5 332 97.3
Solyc01g011040.3 Solanum lycopersicum HOM05D003751 ORTHO05D004765 7.7e-69 265.0 332 97.0
Sopen01g034040 Solanum pennellii HOM05D003751 ORTHO05D004765 7.7e-69 265.0 332 97.0
CAN.G541.15 Capsicum annuum HOM05D003751 ORTHO05D004765 6.8e-65 251.9 329 95.1
COL.COLO4_36892 Corchorus olitorius HOM05D003751 ORTHO05D004765 3.8e-60 236.1 332 91.9
FAN22G1318 Fragaria x ananassa HOM05D003751 ORTHO05D004765 6.6e-60 235.3 318 94.7
FAN17G0137 Fragaria x ananassa HOM05D003751 ORTHO05D004765 8.6e-60 235.0 318 94.3
Lsat_1_v5_gn_4_12041 Lactuca sativa HOM05D003751 ORTHO05D004765 1.5e-59 234.2 318 93.7
Lj6A782T110 Lonicera japonica HOM05D003751 ORTHO05D004765 1.9e-59 233.8 322 93.5
Cpa.g.sc1.101 Carica papaya HOM05D003751 ORTHO05D004765 4.3e-59 232.6 322 94.1
RcHm_v2.0_Chr4g0438711 Rosa chinensis HOM05D003751 ORTHO05D004765 9.5e-59 231.5 324 93.2
Prupe.1G283000 Prunus persica HOM05D003751 ORTHO05D004765 2.8e-58 229.9 323 93.5
Gohir.A07G069400 Gossypium hirsutum HOM05D003751 ORTHO05D004765 3.6e-58 229.6 332 90.7
CiPaw.05G127300 Carya illinoinensis HOM05D003751 ORTHO05D004765 6.1e-58 228.8 332 92.2
Gorai.001G078000 Gossypium raimondii HOM05D003751 ORTHO05D004765 6.1e-58 228.8 332 90.4
QL03p071051 Quercus lobata HOM05D003751 ORTHO05D004765 6.1e-58 228.8 319 90.9
HanXRQChr12g0379561 Helianthus annuus HOM05D003751 ORTHO05D004765 1.0e-57 228.0 320 93.4
Nn4g23361 Nelumbo nucifera HOM05D003751 ORTHO05D004765 1.4e-57 227.6 325 91.4
Hma1.2p1_0357F.1_g134490 Hydrangea macrophylla HOM05D003751 ORTHO05D004765 1.8e-57 227.3 318 93.7
Lj2g0008638 Lotus japonicus HOM05D003751 ORTHO05D004765 1.8e-57 227.3 332 90.4
MD13G1065200 Malus domestica HOM05D003751 ORTHO05D004765 1.8e-57 227.3 321 92.5
TPR.G24438 Trifolium pratense HOM05D003751 ORTHO05D004765 1.8e-57 227.3 332 90.7
GSVIVG01012205001 Vitis vinifera HOM05D003751 ORTHO05D004765 1.8e-57 227.3 318 94.0
Cfa008900 Carpinus fangiana HOM05D003751 ORTHO05D004765 2.3e-57 226.9 325 92.6
Lalb_Chr17g0341071 Lupinus albus HOM05D003751 ORTHO05D004765 2.3e-57 226.9 323 92.6
Gohir.A12G180500 Gossypium hirsutum HOM05D003751 ORTHO05D004765 4.0e-57 226.1 324 90.1
Gohir.D07G073800 Gossypium hirsutum HOM05D003751 ORTHO05D004765 4.0e-57 226.1 326 91.7
Lsat_1_v5_gn_8_48161 Lactuca sativa HOM05D003751 ORTHO05D004765 4.0e-57 226.1 322 92.9
Gorai.008G196500 Gossypium raimondii HOM05D003751 ORTHO05D004765 6.8e-57 225.3 324 91.7
Manes.05G108200 Manihot esculenta HOM05D003751 ORTHO05D004765 6.8e-57 225.3 320 91.9
Ciclev10021138m.g Citrus clementina HOM05D003751 ORTHO05D004765 8.9e-57 224.9 322 93.2
Duzib205G0623 Durio zibethinus HOM05D003751 ORTHO05D004765 8.9e-57 224.9 332 88.6
Psat2g128600 Pisum sativum HOM05D003751 ORTHO05D004765 8.9e-57 224.9 320 92.5
MD16G1063500 Malus domestica HOM05D003751 ORTHO05D004765 1.2e-56 224.6 326 91.1
Hund14089 Selenicereus undatus HOM05D003751 ORTHO05D004765 1.2e-56 224.6 324 89.5
CANSAT80G0608 Cannabis sativa HOM05D003751 ORTHO05D004765 1.5e-56 224.2 318 92.8
CANSAT80G1362 Cannabis sativa HOM05D003751 ORTHO05D004765 1.5e-56 224.2 318 92.8
ECA233G2546 Erigeron canadensis HOM05D003751 ORTHO05D004765 2.0e-56 223.8 322 91.9
Glyma.02G114800 Glycine max HOM05D003751 ORTHO05D004765 2.0e-56 223.8 332 90.4
Actinidia33247 Actinidia chinensis HOM05D003751 ORTHO05D004765 2.6e-56 223.4 314 93.6
Lalb_Chr10g0098641 Lupinus albus HOM05D003751 ORTHO05D004765 2.6e-56 223.4 332 90.1
Thecc.03G096900 Theobroma cacao HOM05D003751 ORTHO05D004765 2.6e-56 223.4 332 90.7
Ca_04940_v3 Cicer arietinum L. HOM05D003751 ORTHO05D004765 3.4e-56 223.0 332 90.1
HanXRQChr08g0211521 Helianthus annuus HOM05D003751 ORTHO05D004765 4.4e-56 222.6 318 92.8
TAR622G0005 Trochodendron aralioides HOM05D003751 ORTHO05D004765 4.4e-56 222.6 323 87.6
arahy.Tifrunner.gnm1.ann1.V223R1 Arachis hypogaea HOM05D003751 ORTHO05D004765 5.8e-56 222.2 332 90.4
arahy.Tifrunner.gnm1.ann1.Y3WTJM Arachis hypogaea HOM05D003751 ORTHO05D004765 5.8e-56 222.2 332 90.4
Phvul.002G081300 Phaseolus vulgaris HOM05D003751 ORTHO05D004765 5.8e-56 222.2 306 95.4
Nn3g17386 Nelumbo nucifera HOM05D003751 ORTHO05D004765 9.8e-56 221.5 325 90.8
Actinidia12325 Actinidia chinensis HOM05D003751 ORTHO05D004765 1.7e-55 220.7 322 91.9
Manes.01G029800 Manihot esculenta HOM05D003751 ORTHO05D004765 1.7e-55 220.7 322 90.7
CsaV3_5G033180 Cucumis sativus L. HOM05D003751 ORTHO05D004765 3.7e-55 219.5 332 89.2
Rhsim12G0134600 Rhododendron simsii HOM05D003751 ORTHO05D004765 3.7e-55 219.5 334 80.2
TWI79G0662 Tripterygium wilfordii HOM05D003751 ORTHO05D004765 3.7e-55 219.5 332 90.7
CiPaw.06G090700 Carya illinoinensis HOM05D003751 ORTHO05D004765 4.9e-55 219.2 332 90.1
PGR102G2931 Punica granatum HOM05D003751 ORTHO05D004765 4.9e-55 219.2 328 89.6
Hund05853 Selenicereus undatus HOM05D003751 ORTHO05D004765 4.9e-55 219.2 332 86.4
Sc11g0002320 Simmondsia chinensis HOM05D003751 ORTHO05D004765 4.9e-55 219.2 325 88.3
Glyma.01G056300 Glycine max HOM05D003751 ORTHO05D004765 6.4e-55 218.8 332 89.8
Peaxi162Scf00097g00610 Petunia axillaris HOM05D003751 ORTHO05D004765 6.4e-55 218.8 349 63.0
VMungo1215G2610 Vigna mungo HOM05D003751 ORTHO05D004765 6.4e-55 218.8 326 90.2
SGA_v2.0_scaffold36G14436 Striga asiatica HOM05D003751 ORTHO05D004765 1.1e-54 218.0 326 91.1
Cc11_g12270 Coffea canephora HOM05D003751 ORTHO05D004765 1.4e-54 217.6 326 92.6
Migut.L01211 Erythranthe guttata HOM05D003751 ORTHO05D004765 1.4e-54 217.6 326 90.8
Eucgr.B03173 Eucalyptus grandis HOM05D003751 ORTHO05D004765 1.4e-54 217.6 327 89.6
Sed0012304 Sechium edule HOM05D003751 ORTHO05D004765 1.4e-54 217.6 324 89.2
PSO063G1864 Papaver somniferum HOM05D003751 ORTHO05D004765 1.9e-54 217.2 322 91.3
Medtr5g043800 Medicago truncatula HOM05D003751 ORTHO05D004765 3.2e-54 216.5 332 89.2
THA.LOC104818332 Tarenaya hassleriana HOM05D003751 ORTHO05D004765 4.1e-54 216.1 322 91.9
Ah.03g139090 Amaranthus hybridus HOM05D003751 ORTHO05D004765 7.0e-54 215.3 329 87.2
Potri.010G160700 Populus trichocarpa HOM05D003751 ORTHO05D004765 2.7e-53 213.4 328 88.1
THA.LOC104801343 Tarenaya hassleriana HOM05D003751 ORTHO05D004765 3.5e-53 213.0 325 89.5
Thecc.02G335000 Theobroma cacao HOM05D003751 ORTHO05D004765 3.5e-53 213.0 332 88.3
SGA_v2.0_scaffold16G07765 Striga asiatica HOM05D003751 ORTHO05D004765 4.6e-53 212.6 326 90.5
Migut.E00057 Erythranthe guttata HOM05D003751 ORTHO05D004765 7.8e-53 211.8 330 89.1
Sabra08G0070200 Salix brachista HOM05D003751 ORTHO05D004765 7.8e-53 211.8 335 87.2
Potri.008G093400 Populus trichocarpa HOM05D003751 ORTHO05D004765 1.3e-52 211.1 335 87.5
Dinv34089 Davidia involucrata HOM05D003751 ORTHO05D004765 2.3e-52 210.3 297 95.3
Duzib251G0914 Durio zibethinus HOM05D003751 ORTHO05D004765 3.0e-52 209.9 322 91.0
MSTRG.7761 Avicennia marina HOM05D003751 ORTHO05D004765 5.0e-52 209.1 331 89.1
AUR62007943 Chenopodium quinoa HOM05D003751 ORTHO05D004765 6.6e-52 208.8 325 76.0
Thhalv10004587m.g Eutrema salsugineum HOM05D003751 ORTHO05D004765 8.6e-52 208.4 322 91.0
Aa31LG11G2120 Aethionema arabicum HOM05D003751 ORTHO05D004765 1.1e-51 208.0 325 89.8
Carub.0008s2191 Capsella rubella HOM05D003751 ORTHO05D004765 1.5e-51 207.6 324 90.4
Haze_11929 Corylus avellana HOM05D003751 ORTHO05D004765 1.5e-51 207.6 366 68.0
Sed0016795 Sechium edule HOM05D003751 ORTHO05D004765 1.9e-51 207.2 326 89.0
Actinidia19010 Actinidia chinensis HOM05D003751 ORTHO05D004765 2.5e-51 206.8 336 85.7
Sp2g24470 Schrenkiella parvula HOM05D003751 ORTHO05D004765 2.5e-51 206.8 322 90.7
AL8G37900 Arabidopsis lyrata HOM05D003751 ORTHO05D004765 3.3e-51 206.5 321 90.0
COL.COLO4_27919 Corchorus olitorius HOM05D003751 ORTHO05D004765 3.3e-51 206.5 323 88.2
A03p46870 Brassica napus HOM05D003751 ORTHO05D004765 4.3e-51 206.1 322 91.0
CSS0038990 Camellia sinensis var. sinensis HOM05D003751 ORTHO05D004765 4.3e-51 206.1 331 79.5
AT5G61240 Arabidopsis thaliana HOM05D003751 ORTHO05D004765 5.6e-51 205.7 323 89.5
CARHR274990 Cardamine hirsuta HOM05D003751 ORTHO05D004765 5.6e-51 205.7 323 89.5
BcaC06g33219 Brassica carinata HOM05D003751 ORTHO05D004765 7.3e-51 205.3 322 90.4
C07p44920 Brassica napus HOM05D003751 ORTHO05D004765 7.3e-51 205.3 322 90.4
TWI75G1095 Tripterygium wilfordii HOM05D003751 ORTHO05D004765 2.8e-50 203.4 245 90.6
BcaC06g33170 Brassica carinata HOM05D003751 ORTHO05D004765 3.6e-50 203.0 322 90.4
vmacro01326 Vaccinium macrocarpon HOM05D003751 ORTHO05D004765 3.6e-50 203.0 355 64.8
AUR62003123 Chenopodium quinoa HOM05D003751 ORTHO05D004765 6.2e-50 202.2 246 87.8
Hma1.2p1_0322F.1_g124910 Hydrangea macrophylla HOM05D003751 ORTHO05D004765 8.0e-50 201.8 322 89.4
Peaxi162Scf00314g00122 Petunia axillaris HOM05D003751 ORTHO05D004765 1.4e-49 201.1 296 92.6
A09p07270 Brassica napus HOM05D003751 ORTHO05D004765 3.1e-49 199.9 322 89.8
BraA03t13807Z Brassica rapa HOM05D003751 ORTHO05D004765 6.8e-49 198.7 331 77.0
SalBow2G2522 Salvia bowleyana HOM05D003751 ORTHO05D004765 6.8e-49 198.7 346 85.0
BcaC04g23458 Brassica carinata HOM05D003751 ORTHO05D004765 8.9e-49 198.4 322 89.8
C09p08130 Brassica napus HOM05D003751 ORTHO05D004765 1.5e-48 197.6 322 89.4
SEGI_02286 Sequoiadendron giganteum HOM05D003751 ORTHO05D004765 2.0e-48 197.2 324 86.4
CDE07G1785 Ceratophyllum demersum HOM05D003751 ORTHO05D004765 3.4e-48 196.4 304 90.8
FvH4_4g30420 Fragaria vesca HOM05D003751 ORTHO05D004765 7.5e-48 195.3 320 89.7
BolC7t45015H Brassica oleracea HOM05D003751 ORTHO05D004765 9.8e-48 194.9 338 73.7
Sabra10G0122300 Salix brachista HOM05D003751 ORTHO05D004765 9.8e-48 194.9 241 90.0
SalBow2G2568 Salvia bowleyana HOM05D003751 ORTHO05D004765 1.3e-47 194.5 346 76.9
Gohir.D02G128600 Gossypium hirsutum HOM05D003751 ORTHO05D004765 2.9e-47 193.4 306 88.9
Gorai.005G144300 Gossypium raimondii HOM05D003751 ORTHO05D004765 2.9e-47 193.4 306 88.9
Gohir.D12G183125 Gossypium hirsutum HOM05D003751 ORTHO05D004765 6.4e-47 192.2 324 80.9
Gohir.D12G183200 Gossypium hirsutum HOM05D003751 ORTHO05D004765 6.4e-47 192.2 324 80.9
THA.LOC104824065 Tarenaya hassleriana HOM05D003751 ORTHO05D004765 1.4e-46 191.0 323 84.8
Aqoxy3G03571 Aquilegia oxysepala HOM05D003751 ORTHO05D004765 5.4e-46 189.1 322 87.9
BraA09t36376Z Brassica rapa HOM05D003751 ORTHO05D004765 7.0e-46 188.7 341 72.1
MSTRG.738 Avicennia marina HOM05D003751 ORTHO05D004765 1.2e-45 188.0 331 84.3
FAN12G0947 Fragaria x ananassa HOM05D003751 ORTHO05D004765 1.6e-45 187.6 336 76.2
PSO384G1483 Papaver somniferum HOM05D003751 ORTHO05D004765 1.6e-45 187.6 322 87.6
MELO3C002928.2 Cucumis melo HOM05D003751 ORTHO05D004765 4.6e-45 186.0 320 87.8
CsaV3_5G025510 Cucumis sativus L. HOM05D003751 ORTHO05D004765 1.7e-44 184.1 324 88.0
SHI26375 Sapria himalayana HOM05D003751 ORTHO05D004765 2.3e-44 183.7 243 70.4
BolC9t53725H Brassica oleracea HOM05D003751 ORTHO05D006139 1.9e-43 180.6 244 87.3
CSS0000444 Camellia sinensis var. sinensis HOM05D003751 ORTHO05D004765 2.5e-43 180.3 327 69.7
ClCG09G022210 Citrullus lanatus HOM05D003751 ORTHO05D004765 2.5e-43 180.3 328 73.2
DCAR_007183 Daucus carota HOM05D003751 ORTHO05D004765 5.6e-43 179.1 337 81.9
ATR0064G031 Amborella trichopoda HOM05D003751 ORTHO05D004765 9.5e-43 178.3 319 85.3
HPP92_007743 Vanilla planifolia HOM05D003751 ORTHO05D004765 2.8e-42 176.8 306 88.6
MBI16_g16360_MAGBIO Magnolia biondii HOM05D003751 ORTHO05D004765 6.2e-42 175.6 330 84.2
Sp1g12050 Schrenkiella parvula HOM05D003751 ORTHO05D004765 6.2e-42 175.6 332 81.0
AT1G13910 Arabidopsis thaliana HOM05D003751 ORTHO05D004765 8.1e-42 175.3 332 81.9
MELO3C012139.2 Cucumis melo HOM05D003751 ORTHO05D004765 1.4e-41 174.5 105 81.0
AL1G25740 Arabidopsis lyrata HOM05D003751 ORTHO05D004765 1.8e-41 174.1 332 81.6
Thhalv10008166m.g Eutrema salsugineum HOM05D003751 ORTHO05D004765 2.3e-41 173.7 332 82.5
QL03p070738 Quercus lobata HOM05D003751 ORTHO05D004765 2.3e-41 173.7 94 89.4
SalBow2G0317 Salvia bowleyana HOM05D003751 ORTHO05D004765 2.3e-41 173.7 222 93.7
ClCG05G023830 Citrullus lanatus HOM05D003751 ORTHO05D004765 6.8e-41 172.2 105 80.0
vmacro16373 Vaccinium macrocarpon HOM05D003751 ORTHO05D004765 8.9e-41 171.8 95 84.2
vmacro23251 Vaccinium macrocarpon HOM05D003751 ORTHO05D004765 8.9e-41 171.8 95 84.2
Dinv38780 Davidia involucrata HOM05D003751 ORTHO05D004765 2.0e-40 170.6 83 95.2
FAN07G2601 Fragaria x ananassa HOM05D003751 ORTHO05D004765 2.0e-40 170.6 94 85.1
Cpa.g.sc94.5 Carica papaya HOM05D003751 ORTHO05D004765 3.7e-39 166.4 323 52.6
DCAR_005254 Daucus carota HOM05D003751 ORTHO05D004765 8.3e-39 165.2 94 84.0
DCAR_016919 Daucus carota HOM05D003751 ORTHO05D004765 8.3e-39 165.2 94 84.0
Zm00001eb008460 Zea mays HOM05D003751 ORTHO05D004765 1.2e-37 161.4 81 90.1
Os03g0211900 Oryza sativa ssp. japonica HOM05D003751 ORTHO05D004765 4.6e-37 159.5 100 78.0
CDE04G0854 Ceratophyllum demersum HOM05D003751 ORTHO05D004765 1.0e-36 158.3 80 88.8
Carub.0001s1361 Capsella rubella HOM05D003751 ORTHO05D004765 3.9e-36 156.4 329 81.5
Aa31LG1G1100 Aethionema arabicum HOM05D002953 ORTHO05D003249 2.1e-34 150.6 253 77.9
Hund25193 Selenicereus undatus HOM05D003751 ORTHO05D004765 5.4e-30 136.0 73 84.9
AagrBONN_evm.TU.Sc2ySwM_228.5257 Anthoceros agrestis HOM05D003751 ORTHO05D004765 7.1e-30 135.6 337 75.4
SMO307G0068 Selaginella moellendorffii HOM05D003751 ORTHO05D004765 2.1e-29 134.0 304 79.9
Oeu031422.1 Olea europaea HOM05D003751 ORTHO05D004765 3.9e-28 129.8 83 75.9
CARHR014280 Cardamine hirsuta HOM05D003751 ORTHO05D004765 5.1e-28 129.4 97 62.9
Actinidia28633 Actinidia chinensis HOM05D003751 ORTHO05D004765 7.3e-27 125.6 276 81.2
Nitab4.5_0017073g0010 Nicotiana tabacum HOM05D003751 ORTHO05D004765 1.1e-19 101.7 65 75.4
Nitab4.5_0004304g0080 Nicotiana tabacum HOM05D003751 ORTHO05D004765 1.9e-19 100.9 86 61.6
Dinv16710 Davidia involucrata HOM05D003751 ORTHO05D004765 1.3e-18 98.2 245 72.2
Sopen05g021560 Solanum pennellii HOM05D003751 ORTHO05D004765 4.8e-18 96.3 50 84.0
Lj3A1031T31 Lonicera japonica HOM05D003751 ORTHO05D004765 8.1e-18 95.5 119 57.1
SMO239G0097 Selaginella moellendorffii HOM05D003751 ORTHO05D011646 1.1e-17 95.1 64 65.6
CSS0008157 Camellia sinensis var. sinensis HOM05D003751 ORTHO05D004765 1.4e-17 94.7 118 90.7
Gohir.A03G103400 Gossypium hirsutum HOM05D003751 ORTHO05D004765 4.0e-17 93.2 258 87.6
SMO239G0021 Selaginella moellendorffii HOM05D003751 ORTHO05D011646 2.0e-16 90.9 64 64.1
SEGI_40768 Sequoiadendron giganteum HOM05D003751 ORTHO05D004765 2.4e-14 84.0 63 61.9
CAN.G607.6 Capsicum annuum HOM05D003751 ORTHO05D024790 3.5e-13 80.1 42 90.5
RcHm_v2.0_Chr3g0459551 Rosa chinensis HOM05D003751 ORTHO05D004765 4.6e-13 79.7 48 81.2
Sopen05g021540 Solanum pennellii HOM05D003751 ORTHO05D004765 4.6e-13 79.7 43 83.7
Gohir.D13G128551 Gossypium hirsutum HOM05D003751 ORTHO05D024790 3.9e-12 76.6 42 90.5
Gorai.013G144600 Gossypium raimondii HOM05D003751 ORTHO05D024790 3.3e-11 73.6 42 88.1
BolC2t12198H Brassica oleracea HOM05D003751 ORTHO05D017703 9.0e-09 65.5 34 91.2
C02p61470 Brassica napus HOM05D003751 ORTHO05D017703 7.6e-08 62.4 34 85.3
Sopen01g022300 Solanum pennellii HOM05D003751 ORTHO05D004765 9.9e-08 62.0 40 72.5
BraA02t09094Z Brassica rapa HOM05D003751 ORTHO05D004765 6.4e-07 59.3 44 72.7


User provided reference genes

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