Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0002827g0030 Nicotiana tabacum HOM05D007037 ORTHO05D006691 3.2e-37 157.9 81 100.0
Nitab4.5_0005074g0010 Nicotiana tabacum HOM05D007037 ORTHO05D006691 3.6e-36 154.5 81 96.3
PGSC0003DMG400016450 Solanum tuberosum HOM05D007037 ORTHO05D006691 1.2e-26 122.9 85 75.3
Sopen02g025300 Solanum pennellii HOM05D007037 ORTHO05D006691 1.7e-25 119.0 85 72.9
Nitab4.5_0009030g0010 Nicotiana tabacum HOM05D007037 ORTHO05D006691 3.5e-23 111.3 80 73.8
Nitab4.5_0000005g0340 Nicotiana tabacum HOM05D007037 ORTHO05D006691 3.9e-22 107.8 80 71.2
Hma1.2p1_0749F.1_g212630 Hydrangea macrophylla HOM05D007037 ORTHO05D006691 2.6e-18 95.1 78 65.4
Hma1.2p1_0749F.1_g212635 Hydrangea macrophylla HOM05D007037 ORTHO05D006691 2.6e-18 95.1 78 65.4
Dinv13899 Davidia involucrata HOM05D001191 ORTHO05D000979 4.4e-18 94.4 81 61.7
DCAR_008156 Daucus carota HOM05D007037 ORTHO05D006691 1.3e-17 92.8 80 58.8
Cc09_g01610 Coffea canephora HOM05D007037 ORTHO05D006691 2.2e-17 92.0 78 57.7
Oeu025269.1 Olea europaea HOM05D007037 ORTHO05D006691 3.7e-17 91.3 80 62.5
Peaxi162Scf00331g00119 Petunia axillaris HOM05D007037 ORTHO05D006691 4.9e-17 90.9 81 63.0
CSS0026389 Camellia sinensis var. sinensis HOM05D007037 ORTHO05D006691 6.4e-17 90.5 81 55.6
QL05p073032 Quercus lobata HOM05D007037 ORTHO05D006691 6.4e-17 90.5 82 58.5
Peaxi162Scf01204g00120 Petunia axillaris HOM05D007037 ORTHO05D006691 8.3e-17 90.1 79 60.8
TAR624G1029 Trochodendron aralioides HOM05D007037 ORTHO05D006691 1.4e-16 89.4 85 58.8
CSS0006945 Camellia sinensis var. sinensis HOM05D007037 ORTHO05D006691 9.2e-16 86.7 79 59.5
Solyc02g080600.1 Solanum lycopersicum HOM05D007037 ORTHO05D006691 6.0e-15 84.0 66 69.7
Prupe.4G019700 Prunus persica HOM05D007037 ORTHO05D006691 7.8e-15 83.6 80 55.0
Sopen02g011150 Solanum pennellii HOM05D007037 ORTHO05D006691 7.8e-15 83.6 76 57.9
CiPaw.09G092600 Carya illinoinensis HOM05D007037 ORTHO05D006691 1.7e-14 82.4 78 53.8
ECA234G0681 Erigeron canadensis HOM05D007037 ORTHO05D006691 5.0e-14 80.9 78 52.6
PGSC0003DMG400019869 Solanum tuberosum HOM05D007037 ORTHO05D006691 5.0e-14 80.9 75 58.7
Eucgr.E04050 Eucalyptus grandis HOM05D007037 ORTHO05D006691 6.6e-14 80.5 81 54.3
Lsat_1_v5_gn_4_60821 Lactuca sativa HOM05D007037 ORTHO05D006691 8.6e-14 80.1 80 52.5
SalBow8G3366 Salvia bowleyana HOM05D007037 ORTHO05D006691 8.6e-14 80.1 68 64.7
Manes.16G006400 Manihot esculenta HOM05D007037 ORTHO05D006691 1.1e-13 79.7 79 53.2
MD05G1347800 Malus domestica HOM05D007037 ORTHO05D006691 2.5e-13 78.6 80 50.0
Potri.011G004400 Populus trichocarpa HOM05D007037 ORTHO05D006691 4.3e-13 77.8 78 51.3
Manes.01G159201 Manihot esculenta HOM05D007037 ORTHO05D006691 5.6e-13 77.4 79 51.9
Potri.004G013601 Populus trichocarpa HOM05D007037 ORTHO05D006691 5.6e-13 77.4 75 49.3
MD10G1322200 Malus domestica HOM05D007037 ORTHO05D006691 7.3e-13 77.0 77 51.9
RcHm_v2.0_Chr5g0002881 Rosa chinensis HOM05D007037 ORTHO05D006691 7.3e-13 77.0 79 50.6
FAN25G2740 Fragaria x ananassa HOM05D007037 ORTHO05D006691 1.6e-12 75.9 77 49.4
Thecc.06G221700 Theobroma cacao HOM05D007037 ORTHO05D006691 2.1e-12 75.5 80 51.2
Duzib192G0147 Durio zibethinus HOM05D007037 ORTHO05D006691 2.8e-12 75.1 79 51.9
Medtr2g023440 Medicago truncatula HOM05D007037 ORTHO05D006691 6.2e-12 73.9 80 47.5
TPR.G13436 Trifolium pratense HOM05D007037 ORTHO05D006691 8.1e-12 73.6 81 48.1
Atru.chr10.2236 Acer truncatum HOM05D007037 ORTHO05D006691 1.1e-11 73.2 78 52.6
Gohir.A05G170900 Gossypium hirsutum HOM05D007037 ORTHO05D006691 1.1e-11 73.2 78 47.4
Gohir.D05G173900 Gossypium hirsutum HOM05D007037 ORTHO05D006691 1.4e-11 72.8 79 49.4
Gorai.009G179200 Gossypium raimondii HOM05D007037 ORTHO05D006691 1.4e-11 72.8 79 49.4
FAN21G2981 Fragaria x ananassa HOM05D001191 ORTHO05D000979 1.8e-11 72.4 79 48.1
vmacro23211 Vaccinium macrocarpon HOM05D007037 ORTHO05D006691 2.3e-11 72.0 83 50.6
COL.COLO4_00342 Corchorus olitorius HOM05D007037 ORTHO05D006691 6.8e-11 70.5 79 49.4
Cc05_g04380 Coffea canephora HOM05D007037 ORTHO05D006691 5.8e-10 67.4 80 48.8
CsaV3_6G049020 Cucumis sativus L. HOM05D007037 ORTHO05D006691 1.7e-09 65.9 77 45.5
ClCG01G021940 Citrullus lanatus HOM05D007037 ORTHO05D006691 2.2e-09 65.5 81 45.7
Sed0008683 Sechium edule HOM05D007037 ORTHO05D006691 2.2e-09 65.5 78 44.9
Migut.M01325 Erythranthe guttata HOM05D007037 ORTHO05D006691 6.4e-09 63.9 80 46.2
Aqoxy1G02111 Aquilegia oxysepala HOM05D007037 ORTHO05D006691 8.3e-09 63.5 71 47.9
Nn1g07147 Nelumbo nucifera HOM05D009550 ORTHO05D006691 1.9e-08 62.4 85 40.0
Rhsim13G0153300 Rhododendron simsii HOM05D007037 ORTHO05D006691 3.2e-08 61.6 85 48.2
Actinidia09718 Actinidia chinensis HOM05D007037 ORTHO05D006691 5.4e-08 60.8 84 44.0
Ca_26471_v3 Cicer arietinum L. HOM05D007037 ORTHO05D006691 5.4e-08 60.8 86 40.7
FvH4_3g01970 Fragaria vesca HOM05D007037 ORTHO05D006691 5.4e-08 60.8 78 38.5
Potri.014G153900 Populus trichocarpa HOM05D009550 ORTHO05D006691 7.1e-08 60.5 84 44.0
Lj6g0006723 Lotus japonicus HOM05D007037 ORTHO05D006691 9.2e-08 60.1 79 43.0
Sed0010286 Sechium edule HOM05D007037 ORTHO05D006691 1.2e-07 59.7 78 43.6
Glyma.17G012900 Glycine max HOM05D007037 ORTHO05D006691 2.1e-07 58.9 80 43.8
Phvul.003G079400 Phaseolus vulgaris HOM05D007037 ORTHO05D006691 2.7e-07 58.5 80 43.8
vmacro15807 Vaccinium macrocarpon HOM05D007037 ORTHO05D006691 4.6e-07 57.8 54 55.6
Glyma.07G261100 Glycine max HOM05D007037 ORTHO05D006691 6.0e-07 57.4 80 42.5
Lj4g0019440 Lotus japonicus HOM05D007037 ORTHO05D006691 7.8e-07 57.0 78 46.2
CiPaw.10G071700 Carya illinoinensis HOM05D007037 ORTHO05D006691 1.3e-06 56.2 80 41.2
Gohir.D13G171533 Gossypium hirsutum HOM05D007037 ORTHO05D006691 1.3e-06 56.2 78 39.7
Ciclev10018055m.g Citrus clementina HOM05D007037 ORTHO05D006691 1.7e-06 55.8 77 42.9
HanXRQChr16g0506491 Helianthus annuus HOM05D007037 ORTHO05D006691 1.7e-06 55.8 78 39.7
TPR.G37004 Trifolium pratense HOM05D007037 ORTHO05D006691 1.7e-06 55.8 75 38.7
unitig_748.g7588 Utricularia gibba HOM05D007037 ORTHO05D006691 1.7e-06 55.8 78 41.0
arahy.Tifrunner.gnm1.ann1.98H95S Arachis hypogaea HOM05D007037 ORTHO05D006691 2.3e-06 55.5 80 38.8
Ca_21080_v3 Cicer arietinum L. HOM05D007037 ORTHO05D006691 2.3e-06 55.5 78 37.2
Gohir.D13G171150 Gossypium hirsutum HOM05D007037 ORTHO05D006691 2.3e-06 55.5 78 42.3
Zm00001eb048920 Zea mays HOM05D007037 ORTHO05D006691 2.3e-06 55.5 74 44.6
arahy.Tifrunner.gnm1.ann1.CZMF37 Arachis hypogaea HOM05D007037 ORTHO05D006691 3.0e-06 55.1 79 39.2
Solyc02g032840.1 Solanum lycopersicum HOM05D007037 ORTHO05D006691 3.0e-06 55.1 57 54.4
Phvul.011G103200 Phaseolus vulgaris HOM05D009550 ORTHO05D006691 3.9e-06 54.7 53 50.9
Glyma.09G004000 Glycine max HOM05D007037 ORTHO05D006691 5.1e-06 54.3 78 35.9
Gorai.013G189700 Gossypium raimondii HOM05D007037 ORTHO05D006691 5.1e-06 54.3 77 39.0
Phvul.011G103100 Phaseolus vulgaris HOM05D009550 ORTHO05D006691 5.1e-06 54.3 88 37.5
DCAR_019271 Daucus carota HOM05D007037 ORTHO05D006691 6.6e-06 53.9 85 41.2
Sabra11G0003500 Salix brachista HOM05D007037 ORTHO05D006691 8.6e-06 53.5 77 37.7
TAR626G0921 Trochodendron aralioides HOM05D007037 ORTHO05D006691 8.6e-06 53.5 63 49.2


User provided reference genes

Program Settings