Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0002825g0060 Nicotiana tabacum HOM05D006263 ORTHO05D007549 1.6e-199 699.1 340 100.0
Nitab4.5_0000001g0100 Nicotiana tabacum HOM05D006263 ORTHO05D007549 7.1e-195 683.7 340 97.6
PGSC0003DMG400008259 Solanum tuberosum HOM05D006263 ORTHO05D007549 6.3e-183 644.0 339 91.4
Solyc10g050850.2 Solanum lycopersicum HOM05D006263 ORTHO05D007549 1.1e-182 643.3 339 90.9
Sopen10g022420 Solanum pennellii HOM05D006263 ORTHO05D007549 4.1e-182 641.3 339 90.6
CAN.G216.5 Capsicum annuum HOM05D006263 ORTHO05D007549 1.9e-179 632.5 340 88.5
Peaxi162Scf00076g01055 Petunia axillaris HOM05D006263 ORTHO05D007549 3.6e-162 575.1 341 83.0
Dinv14580 Davidia involucrata HOM05D006263 ORTHO05D007549 1.7e-148 529.6 342 72.8
Oeu060008.1 Olea europaea HOM05D006263 ORTHO05D007549 8.6e-148 527.3 342 71.3
DCAR_013689 Daucus carota HOM05D006263 ORTHO05D007549 4.9e-143 511.5 338 69.2
Migut.B01469 Erythranthe guttata HOM05D006263 ORTHO05D007549 3.5e-141 505.4 336 69.0
Rhsim04G0087300 Rhododendron simsii HOM05D006263 ORTHO05D007549 1.1e-139 500.4 340 69.7
GSVIVG01033398001 Vitis vinifera HOM05D006263 ORTHO05D007549 2.5e-139 499.2 338 68.3
TAR623G0038 Trochodendron aralioides HOM05D006263 ORTHO05D007549 3.3e-139 498.8 341 70.4
CSS0025413 Camellia sinensis var. sinensis HOM05D006263 ORTHO05D007549 2.6e-136 489.2 334 69.2
Lj2A357T95 Lonicera japonica HOM05D006263 ORTHO05D007549 5.8e-136 488.0 344 66.6
Ciclev10020896m.g Citrus clementina HOM05D006263 ORTHO05D007549 9.8e-136 487.3 344 65.4
PSO339G1401 Papaver somniferum HOM05D006263 ORTHO05D007549 1.1e-134 483.8 342 66.7
COL.COLO4_13602 Corchorus olitorius HOM05D006263 ORTHO05D007549 1.4e-134 483.4 345 65.5
MSTRG.20649 Avicennia marina HOM05D006263 ORTHO05D007549 1.9e-134 483.0 337 67.1
Gorai.007G289300 Gossypium raimondii HOM05D006263 ORTHO05D007549 9.2e-134 480.7 340 65.3
SGA_v2.0_scaffold145G36025 Striga asiatica HOM05D006263 ORTHO05D007549 1.2e-133 480.3 337 64.4
Cfa016439 Carpinus fangiana HOM05D006263 ORTHO05D007549 2.0e-133 479.6 337 68.0
Haze_19416 Corylus avellana HOM05D006263 ORTHO05D007549 2.7e-133 479.2 336 67.3
Duzib177G1028 Durio zibethinus HOM05D006263 ORTHO05D007549 4.6e-133 478.4 339 66.4
Haze_19445 Corylus avellana HOM05D006263 ORTHO05D007549 6.0e-133 478.0 336 67.3
PSO384G1918 Papaver somniferum HOM05D006263 ORTHO05D007549 7.8e-133 477.6 341 66.6
Gohir.A11G259300 Gossypium hirsutum HOM05D006263 ORTHO05D007549 1.0e-132 477.2 340 65.0
Thecc.05G294200 Theobroma cacao HOM05D006263 ORTHO05D007549 1.0e-132 477.2 341 65.1
Atru.chr2.1379 Acer truncatum HOM05D006263 ORTHO05D007549 1.7e-132 476.5 339 66.7
Gohir.D11G269500 Gossypium hirsutum HOM05D006263 ORTHO05D007549 1.7e-132 476.5 340 64.7
Hund06464 Selenicereus undatus HOM05D006263 ORTHO05D007549 1.7e-132 476.5 333 65.5
Aqoxy1G00489 Aquilegia oxysepala HOM05D006263 ORTHO05D007549 3.0e-132 475.7 336 67.0
Cc06_g22910 Coffea canephora HOM05D006263 ORTHO05D007549 3.0e-132 475.7 335 64.8
CiPaw.10G000900 Carya illinoinensis HOM05D006263 ORTHO05D007549 1.9e-131 473.0 339 66.4
TWI34G1357 Tripterygium wilfordii HOM05D006263 ORTHO05D007549 5.6e-131 471.5 345 64.6
Nn7g35844 Nelumbo nucifera HOM05D006263 ORTHO05D007549 1.2e-130 470.3 339 66.4
Prupe.7G003700 Prunus persica HOM05D006263 ORTHO05D007549 3.6e-130 468.8 340 64.4
Potri.006G233200 Populus trichocarpa HOM05D006263 ORTHO05D007549 6.2e-130 468.0 335 65.1
Glyma.16G153300 Glycine max HOM05D006263 ORTHO05D007549 1.1e-129 467.2 339 65.2
Manes.09G141600 Manihot esculenta HOM05D006263 ORTHO05D007549 1.8e-129 466.5 342 64.0
Phvul.004G080400 Phaseolus vulgaris HOM05D006263 ORTHO05D007549 2.3e-129 466.1 330 66.4
Psat1g096040 Pisum sativum HOM05D006263 ORTHO05D007549 2.3e-129 466.1 337 63.8
VMungo0464G2181 Vigna mungo HOM05D006263 ORTHO05D007549 1.2e-128 463.8 334 65.0
BraA10t44195Z Brassica rapa HOM05D006263 ORTHO05D007549 5.8e-128 461.5 330 61.8
MELO3C006156.2 Cucumis melo HOM05D006263 ORTHO05D007549 5.8e-128 461.5 338 62.7
HanXRQChr01g0024721 Helianthus annuus HOM05D006263 ORTHO05D007549 7.5e-128 461.1 344 63.4
Lsat_1_v5_gn_1_59641 Lactuca sativa HOM05D006263 ORTHO05D007549 7.5e-128 461.1 340 62.6
QL07p019666 Quercus lobata HOM05D006263 ORTHO05D007549 9.8e-128 460.7 348 63.8
CANSAT78G2484 Cannabis sativa HOM05D006263 ORTHO05D007549 1.3e-127 460.3 340 63.2
Potri.019G034400 Populus trichocarpa HOM05D006263 ORTHO05D007549 1.3e-127 460.3 341 63.3
unitig_26.g9717 Utricularia gibba HOM05D006263 ORTHO05D007549 2.2e-127 459.5 333 62.8
THA.LOC104827270 Tarenaya hassleriana HOM05D006263 ORTHO05D007549 2.9e-127 459.1 333 64.6
A10p21320 Brassica napus HOM05D006263 ORTHO05D007549 4.9e-127 458.4 330 61.5
Lj6g0008715 Lotus japonicus HOM05D006263 ORTHO05D007549 4.9e-127 458.4 339 63.4
ClCG05G001960 Citrullus lanatus HOM05D006263 ORTHO05D007549 6.4e-127 458.0 338 62.1
MD12G1003100 Malus domestica HOM05D006263 ORTHO05D007549 6.4e-127 458.0 345 62.6
C09p58780 Brassica napus HOM05D006263 ORTHO05D007549 8.3e-127 457.6 332 61.7
Carub.0006s1648 Capsella rubella HOM05D006263 ORTHO05D007549 1.1e-126 457.2 331 62.2
AUR62012878 Chenopodium quinoa HOM05D006263 ORTHO05D007549 1.4e-126 456.8 335 64.5
Sp6g26120 Schrenkiella parvula HOM05D006263 ORTHO05D007549 1.9e-126 456.4 331 62.8
Eucgr.L01413 Eucalyptus grandis HOM05D006263 ORTHO05D007549 2.4e-126 456.1 336 64.3
AT5G18200 Arabidopsis thaliana HOM05D006263 ORTHO05D007549 3.2e-126 455.7 332 62.0
Eucgr.K02258 Eucalyptus grandis HOM05D006263 ORTHO05D007549 7.1e-126 454.5 336 64.0
BcaC04g18720 Brassica carinata HOM05D006263 ORTHO05D007549 9.2e-126 454.1 332 61.4
AUR62027102 Chenopodium quinoa HOM05D006263 ORTHO05D007549 9.2e-126 454.1 346 62.7
Sabra19G0044500 Salix brachista HOM05D006263 ORTHO05D007549 1.2e-125 453.8 343 61.8
BolC9t58720H Brassica oleracea HOM05D006263 ORTHO05D007549 2.7e-125 452.6 333 61.6
Thhalv10013996m.g Eutrema salsugineum HOM05D006263 ORTHO05D007549 7.8e-125 451.1 332 62.0
TAR369G0989 Trochodendron aralioides HOM05D006263 ORTHO05D007549 1.3e-124 450.3 340 64.7
AL6G29400 Arabidopsis lyrata HOM05D006263 ORTHO05D007549 2.3e-124 449.5 332 62.0
PGR042G1093 Punica granatum HOM05D006263 ORTHO05D007549 6.6e-124 448.0 337 62.0
RcHm_v2.0_Chr3g0497171 Rosa chinensis HOM05D006263 ORTHO05D007549 6.6e-124 448.0 351 62.1
BcaB08g36696 Brassica carinata HOM05D006263 ORTHO05D007549 8.6e-124 447.6 329 61.1
Ca_04490_v3 Cicer arietinum L. HOM05D006263 ORTHO05D007549 1.5e-123 446.8 343 61.8
Medtr6g029470 Medicago truncatula HOM05D006263 ORTHO05D007549 1.9e-123 446.4 333 64.9
ECA285G0004 Erigeron canadensis HOM05D006263 ORTHO05D007549 2.5e-123 446.0 337 62.3
arahy.Tifrunner.gnm1.ann1.NGU2DL Arachis hypogaea HOM05D006263 ORTHO05D007549 9.5e-123 444.1 337 62.9
CARHR194860 Cardamine hirsuta HOM05D006263 ORTHO05D007549 1.2e-122 443.7 335 59.4
Lalb_Chr06g0173981 Lupinus albus HOM05D006263 ORTHO05D007549 2.1e-122 443.0 342 60.8
Sabra19G0042300 Salix brachista HOM05D006263 ORTHO05D007549 9.9e-120 434.1 389 54.8
vmacro09144 Vaccinium macrocarpon HOM05D006263 ORTHO05D007549 6.4e-119 431.4 334 61.7
Aa31LG11G11400 Aethionema arabicum HOM05D006263 ORTHO05D007549 1.2e-117 427.2 364 56.3
Actinidia17306 Actinidia chinensis HOM05D000412 ORTHO05D000429 2.1e-117 426.4 283 70.0
HPP92_015639 Vanilla planifolia HOM05D006263 ORTHO05D007549 8.6e-116 421.0 344 58.7
SalBow5G0264 Salvia bowleyana HOM05D006263 ORTHO05D007549 1.9e-115 419.9 334 58.4
EL10Ac9g22064 Beta vulgaris HOM05D006263 ORTHO05D007549 2.5e-115 419.5 335 61.5
FAN23G2537 Fragaria x ananassa HOM05D006263 ORTHO05D007549 2.5e-115 419.5 331 60.7
FvH4_1g28080 Fragaria vesca HOM05D006263 ORTHO05D007549 3.3e-115 419.1 331 60.4
CDE02G1162 Ceratophyllum demersum HOM05D006263 ORTHO05D007549 4.3e-115 418.7 337 58.5
FAN19G0970 Fragaria x ananassa HOM05D006263 ORTHO05D007549 7.3e-115 417.9 331 60.1
FAN28G0550 Fragaria x ananassa HOM05D006263 ORTHO05D007549 3.1e-113 412.5 331 59.8
Ca_04491_v3 Cicer arietinum L. HOM05D006263 ORTHO05D000429 5.2e-113 411.8 334 59.6
FAN26G0246 Fragaria x ananassa HOM05D006263 ORTHO05D007549 6.8e-113 411.4 331 59.8
Zm00001eb301000 Zea mays HOM05D006263 ORTHO05D007549 6.8e-113 411.4 351 57.0
ATR0697G038 Amborella trichopoda HOM05D006263 ORTHO05D007549 1.5e-112 410.2 376 55.3
FAN28G1368 Fragaria x ananassa HOM05D006263 ORTHO05D007549 4.9e-111 405.2 331 58.3
TPR.G34629 Trifolium pratense HOM05D006263 ORTHO05D007549 2.7e-109 399.4 335 55.8
Oeu003888.1 Olea europaea HOM05D006263 ORTHO05D007549 1.3e-108 397.1 264 69.3
Ah.01g007390 Amaranthus hybridus HOM05D006263 ORTHO05D007549 1.7e-108 396.7 431 48.5
Psat1g096000 Pisum sativum HOM05D006263 ORTHO05D007549 5.1e-108 395.2 336 56.8
Cpa.g.sc51.112 Carica papaya HOM05D006263 ORTHO05D007549 8.7e-108 394.4 354 57.9
Medtr6g029530 Medicago truncatula HOM05D006263 ORTHO05D007549 4.0e-105 385.6 335 56.4
Sc18g0007080 Simmondsia chinensis HOM05D006263 ORTHO05D007549 1.5e-104 383.6 333 56.8
MBI11_g31289_MAGBIO Magnolia biondii HOM05D006263 ORTHO05D007549 3.5e-101 372.5 352 54.0
SEGI_37923 Sequoiadendron giganteum HOM05D006263 ORTHO05D007549 9.6e-99 364.4 347 50.4
CsaV3_3G009370 Cucumis sativus L. HOM05D006263 ORTHO05D007549 5.6e-91 338.6 251 61.8
Sed0020840 Sechium edule HOM05D006263 ORTHO05D007549 3.4e-88 329.3 260 59.2
Eucgr.A02096 Eucalyptus grandis HOM05D006263 ORTHO05D007549 7.6e-88 328.2 287 57.8
Os07g0171200 Oryza sativa ssp. japonica HOM05D006263 ORTHO05D007549 1.6e-82 310.5 232 61.6
Hma1.2p1_0376F.1_g139140 Hydrangea macrophylla HOM05D006263 ORTHO05D007549 5.0e-79 298.9 226 63.7
Hma1.2p1_0376F.1_g139150 Hydrangea macrophylla HOM05D006263 ORTHO05D007549 1.4e-78 297.4 183 76.0
Mapoly0103s0062 Marchantia polymorpha HOM05D006263 ORTHO05D007549 9.0e-73 278.1 342 41.2
Pp3c17_20460 Physcomitrium patens HOM05D006263 ORTHO05D007549 3.9e-68 262.7 340 36.8
SMO367G0539 Selaginella moellendorffii HOM05D006263 ORTHO05D007549 1.7e-63 247.3 334 39.5
FAN16G0439 Fragaria x ananassa HOM05D006263 ORTHO05D007549 6.3e-58 228.8 199 55.3
Hma1.2p1_0376F.1_g139120 Hydrangea macrophylla HOM05D006263 ORTHO05D007549 2.2e-50 203.8 166 62.0
RhsimUnG0048700 Rhododendron simsii HOM05D006263 ORTHO05D007549 6.5e-47 192.2 181 58.0
Pp3c2_1350 Physcomitrium patens HOM05D006263 ORTHO05D007549 3.2e-46 189.9 264 36.4
FAN18G1683 Fragaria x ananassa HOM05D000349 ORTHO05D007549 5.7e-43 179.1 193 47.2
FAN06G4136 Fragaria x ananassa HOM05D000349 ORTHO05D007549 1.7e-39 167.5 181 47.0
FAN18G1526 Fragaria x ananassa HOM05D000349 ORTHO05D007549 4.4e-35 152.9 173 46.2
FAN24G0044 Fragaria x ananassa HOM05D006263 ORTHO05D007549 1.7e-34 151.0 222 39.2
TPR.G18346 Trifolium pratense HOM05D006263 ORTHO05D007549 4.4e-27 126.3 81 70.4
SMO275G0019 Selaginella moellendorffii HOM05D006263 ORTHO05D007549 4.0e-20 103.2 130 40.8
FAN03G3217 Fragaria x ananassa HOM05D002676 ORTHO05D003194 7.0e-17 92.4 58 69.0
FAN11G1140 Fragaria x ananassa HOM05D002676 ORTHO05D003194 7.0e-17 92.4 58 69.0
FAN22G0360 Fragaria x ananassa HOM05D002676 ORTHO05D003194 7.0e-17 92.4 58 69.0
FAN22G1437 Fragaria x ananassa HOM05D002676 ORTHO05D007549 6.0e-16 89.4 58 67.2
SMO367G0580 Selaginella moellendorffii HOM05D006263 ORTHO05D378923 5.0e-15 86.3 128 35.9
FAN15G0659 Fragaria x ananassa HOM05D006263 ORTHO05D007549 4.7e-13 79.7 162 33.3
FAN08G1181 Fragaria x ananassa HOM05D003914 ORTHO05D001189 1.8e-12 77.8 51 64.7
FAN27G3525 Fragaria x ananassa HOM05D003914 ORTHO05D001189 1.8e-12 77.8 51 64.7
FAN22G0951 Fragaria x ananassa HOM05D000005 ORTHO05D000294 2.0e-11 74.3 71 47.9
FAN25G1138 Fragaria x ananassa HOM05D012843 ORTHO05D017973 3.4e-11 73.6 71 47.9
FAN12G3135 Fragaria x ananassa HOM05D000005 ORTHO05D000294 1.3e-10 71.6 71 46.5
FAN22G2156 Fragaria x ananassa HOM05D002676 ORTHO05D003194 5.4e-09 66.2 67 49.3
FAN09G2057 Fragaria x ananassa HOM05D000005 ORTHO05D000294 1.2e-08 65.1 55 50.9
SHI23126 Sapria himalayana HOM05D006263 ORTHO05D007549 7.8e-08 62.4 89 37.1
Phvul.004G082000 Phaseolus vulgaris HOM05D006263 ORTHO05D007549 3.9e-07 60.1 60 51.7


User provided reference genes

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